RNA–Protein interactions for RNA: ENST00000409469.5

CUL1-202, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 2,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-202ENST00000409469 USP32Q8NFA0 1604 aa13.07□□□□□ -0.32
CUL1-202ENST00000409469 NLRP1Q9C000 1473 aa13.07□□□□□ -0.32
CUL1-202ENST00000409469 TCP11L2Q8N4U5 519 aa13.07□□□□□ -0.32
CUL1-202ENST00000409469 RBM33Q96EV2 1170 aaKnown RBP13.07□□□□□ -0.32
CUL1-202ENST00000409469 PTPRUQ92729 1446 aa13.06□□□□□ -0.32
CUL1-202ENST00000409469 DLC1Q96QB1 1528 aa13.06□□□□□ -0.32
CUL1-202ENST00000409469 CFAP53Q96M91 514 aa13.06□□□□□ -0.32
CUL1-202ENST00000409469 EID1Q9Y6B2 187 aa13.06□□□□□ -0.32
CUL1-202ENST00000409469 NINLQ9Y2I6 1382 aa13.06□□□□□ -0.32
CUL1-202ENST00000409469 SLFN5Q08AF3 891 aa13.06□□□□□ -0.32
CUL1-202ENST00000409469 ERICH6BQ5W0A0 696 aa13.06□□□□□ -0.32
CUL1-202ENST00000409469 WWC1Q8IX03 1113 aa13.05□□□□□ -0.32
CUL1-202ENST00000409469 NSD2O96028 1365 aa13.04□□□□□ -0.32
CUL1-202ENST00000409469 AMOTL2Q9Y2J4 779 aa13.04□□□□□ -0.32
CUL1-202ENST00000409469 SOX12O15370 315 aa13.04□□□□□ -0.32
CUL1-202ENST00000409469 EMILIN1Q9Y6C2 1016 aa13.04□□□□□ -0.32
CUL1-202ENST00000409469 PLEKHG1Q9ULL1 1385 aa13.04□□□□□ -0.32
CUL1-202ENST00000409469 BCAR3O75815 825 aa13.03□□□□□ -0.32
CUL1-202ENST00000409469 RUNDC1Q96C34 613 aa13.03□□□□□ -0.32
CUL1-202ENST00000409469 CRBNQ96SW2 442 aa13.03□□□□□ -0.32
CUL1-202ENST00000409469 SAMD1Q6SPF0 538 aaPredicted RBP13.03□□□□□ -0.32
CUL1-202ENST00000409469 SKAP1Q86WV1 359 aa13.03□□□□□ -0.32
CUL1-202ENST00000409469 RRS1Q15050 365 aaKnown RBP13.03□□□□□ -0.32
CUL1-202ENST00000409469 CCDC61Q9Y6R9 512 aa13.03□□□□□ -0.32
CUL1-202ENST00000409469 PMFBP1Q8TBY8 1022 aa13.02□□□□□ -0.33
CUL1-202ENST00000409469 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.02□□□□□ -0.33
CUL1-202ENST00000409469 RBM19Q9Y4C8 960 aaKnown RBP13.02□□□□□ -0.33
CUL1-202ENST00000409469 CPS1P31327 1500 aa13.01□□□□□ -0.33
CUL1-202ENST00000409469 TECPR2O15040 1411 aa13.01□□□□□ -0.33
CUL1-202ENST00000409469 THEMISQ8N1K5 641 aaPredicted RBP13.01□□□□□ -0.33
CUL1-202ENST00000409469 POLKQ9UBT6 870 aa13.01□□□□□ -0.33
CUL1-202ENST00000409469 ATP7BP35670 1465 aa13.01□□□□□ -0.33
CUL1-202ENST00000409469 RIMS1Q86UR5 1692 aaKnown RBP13□□□□□ -0.33
CUL1-202ENST00000409469 FAM135BQ49AJ0 1406 aa13□□□□□ -0.33
CUL1-202ENST00000409469 HMOX1P09601 288 aa13□□□□□ -0.33
CUL1-202ENST00000409469 BCL2L13Q9BXK5 485 aa13□□□□□ -0.33
CUL1-202ENST00000409469 CPSF1Q10570 1443 aaKnown RBP13□□□□□ -0.33
CUL1-202ENST00000409469 IQSEC2Q5JU85 1478 aa12.99□□□□□ -0.33
CUL1-202ENST00000409469 KCNA6P17658 529 aa12.99□□□□□ -0.33
CUL1-202ENST00000409469 TRMT2AQ8IZ69 625 aaKnown RBP12.99□□□□□ -0.33
CUL1-202ENST00000409469 KIF20BQ96Q89 1820 aa12.99□□□□□ -0.33
CUL1-202ENST00000409469 COL3A1P02461 1466 aaPredicted RBP12.99□□□□□ -0.33
CUL1-202ENST00000409469 E9PSI1 815 aa12.99□□□□□ -0.33
CUL1-202ENST00000409469 ACEP12821 1306 aa12.98□□□□□ -0.33
CUL1-202ENST00000409469 DIAPH1O60610 1272 aaKnown RBP12.98□□□□□ -0.33
CUL1-202ENST00000409469 KNDC1Q76NI1 1749 aa12.98□□□□□ -0.33
CUL1-202ENST00000409469 NKTRP30414 1462 aaKnown RBP12.98□□□□□ -0.33
CUL1-202ENST00000409469 TSR2Q969E8 191 aaKnown RBP12.98□□□□□ -0.33
CUL1-202ENST00000409469 MED14O60244 1454 aa12.97□□□□□ -0.33
CUL1-202ENST00000409469 ARHGAP23Q9P227 1491 aa12.97□□□□□ -0.33
CUL1-202ENST00000409469 SLIT1O75093 1534 aa12.97□□□□□ -0.33
CUL1-202ENST00000409469 PLEKHF1Q96S99 279 aa12.97□□□□□ -0.33
CUL1-202ENST00000409469 ANKRD26Q9UPS8 1709 aa12.97□□□□□ -0.33
CUL1-202ENST00000409469 EDC4Q6P2E9 1401 aaKnown RBP12.96□□□□□ -0.33
CUL1-202ENST00000409469 COG3Q96JB2 828 aa12.96□□□□□ -0.34
CUL1-202ENST00000409469 CDC42BPGQ6DT37 1551 aa12.95□□□□□ -0.34
CUL1-202ENST00000409469 FRAT1Q92837 279 aaPredicted RBP12.95□□□□□ -0.34
CUL1-202ENST00000409469 TNNQ9UQP3 1299 aa12.95□□□□□ -0.34
CUL1-202ENST00000409469 TBX22Q9Y458 520 aa12.95□□□□□ -0.34
CUL1-202ENST00000409469 MAPK8IP3Q9UPT6 1336 aa12.95□□□□□ -0.34
CUL1-202ENST00000409469 CEP170BQ9Y4F5 1589 aaPredicted RBP12.95□□□□□ -0.34
CUL1-202ENST00000409469 PRKAR2BP31323 418 aa12.95□□□□□ -0.34
CUL1-202ENST00000409469 TMPOP42166 694 aaKnown RBP12.95□□□□□ -0.34
CUL1-202ENST00000409469 NUTM2GQ5VZR2 741 aa12.95□□□□□ -0.34
CUL1-202ENST00000409469 SIRT1Q96EB6 747 aa12.95□□□□□ -0.34
CUL1-202ENST00000409469 MAP2P11137 1827 aaKnown RBP12.94□□□□□ -0.34
CUL1-202ENST00000409469 PHACTR3Q96KR7 559 aa12.94□□□□□ -0.34
CUL1-202ENST00000409469 THUMPD2Q9BTF0 503 aaKnown RBP12.94□□□□□ -0.34
CUL1-202ENST00000409469 PHF23Q9BUL5 403 aaPredicted RBP12.93□□□□□ -0.34
CUL1-202ENST00000409469 DNAJC5Q9H3Z4 198 aa12.93□□□□□ -0.34
CUL1-202ENST00000409469 TRIM35Q9UPQ4 493 aa12.93□□□□□ -0.34
CUL1-202ENST00000409469 RIPK4P57078 832 aa12.93□□□□□ -0.34
CUL1-202ENST00000409469 TTC21BQ7Z4L5 1316 aa12.93□□□□□ -0.34
CUL1-202ENST00000409469 PNPLA6Q8IY17 1366 aa12.92□□□□□ -0.34
CUL1-202ENST00000409469 TMEM132AQ24JP5 1023 aa12.92□□□□□ -0.34
CUL1-202ENST00000409469 PANK1Q8TE04 598 aa12.92□□□□□ -0.34
CUL1-202ENST00000409469 RGPD8O14715 1765 aaPredicted RBP12.91□□□□□ -0.34
CUL1-202ENST00000409469 LRRC7Q96NW7 1537 aa12.91□□□□□ -0.34
CUL1-202ENST00000409469 NGDNQ8NEJ9 315 aaKnown RBP12.91□□□□□ -0.34
CUL1-202ENST00000409469 CANXP27824 592 aaKnown RBP12.91□□□□□ -0.34
CUL1-202ENST00000409469 ITSN1Q15811 1721 aa12.91□□□□□ -0.34
CUL1-202ENST00000409469 MON2Q7Z3U7 1717 aa12.91□□□□□ -0.34
CUL1-202ENST00000409469 CLUAP1Q96AJ1 413 aa12.91□□□□□ -0.34
CUL1-202ENST00000409469 RSPH6AQ9H0K4 717 aa12.91□□□□□ -0.34
CUL1-202ENST00000409469 LAS1LQ9Y4W2 734 aaKnown RBP12.91□□□□□ -0.34
CUL1-202ENST00000409469 AEBP1Q8IUX7 1158 aa12.9□□□□□ -0.34
CUL1-202ENST00000409469 IL13P35225 146 aa12.9□□□□□ -0.34
CUL1-202ENST00000409469 PLCB2Q00722 1185 aa12.9□□□□□ -0.34
CUL1-202ENST00000409469 ANKLE2Q86XL3 938 aa12.9□□□□□ -0.34
CUL1-202ENST00000409469 ZNF692Q9BU19 519 aaPredicted RBP12.9□□□□□ -0.34
CUL1-202ENST00000409469 ADGRB2O60241 1585 aa12.9□□□□□ -0.35
CUL1-202ENST00000409469 USP6P35125 1406 aa12.89□□□□□ -0.35
CUL1-202ENST00000409469 FANCIQ9NVI1 1328 aa12.89□□□□□ -0.35
CUL1-202ENST00000409469 COG6Q9Y2V7 657 aa12.89□□□□□ -0.35
CUL1-202ENST00000409469 AKAP12Q02952 1782 aa12.89□□□□□ -0.35
CUL1-202ENST00000409469 DIP2AQ14689 1571 aa12.89□□□□□ -0.35
CUL1-202ENST00000409469 HSP90AB2PQ58FF8 381 aa12.89□□□□□ -0.35
CUL1-202ENST00000409469 WDR63Q8IWG1 891 aa12.89□□□□□ -0.35
CUL1-202ENST00000409469 PLEKHG3A1L390 1219 aa12.88□□□□□ -0.35
CUL1-202ENST00000409469 RARSP54136 660 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms