RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 NHSL1Q5SYE7 1610 aa20.83■□□□□ 0.93
AP1S3-204ENST00000409375 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.83■□□□□ 0.93
AP1S3-204ENST00000409375 KIF20BQ96Q89 1820 aa20.83■□□□□ 0.92
AP1S3-204ENST00000409375 PAK3O75914 559 aaPredicted RBP20.82■□□□□ 0.92
AP1S3-204ENST00000409375 PIP4K2BP78356 416 aa20.82■□□□□ 0.92
AP1S3-204ENST00000409375 SSH2Q76I76 1423 aa20.81■□□□□ 0.92
AP1S3-204ENST00000409375 ANP32CO43423 234 aa20.81■□□□□ 0.92
AP1S3-204ENST00000409375 AHDC1Q5TGY3 1603 aaPredicted RBP20.8■□□□□ 0.92
AP1S3-204ENST00000409375 SBNO1A3KN83 1393 aa20.8■□□□□ 0.92
AP1S3-204ENST00000409375 AMER1Q5JTC6 1135 aaPredicted RBP20.79■□□□□ 0.92
AP1S3-204ENST00000409375 PXDNQ92626 1479 aa20.79■□□□□ 0.92
AP1S3-204ENST00000409375 SOS2Q07890 1332 aaPredicted RBP20.78■□□□□ 0.92
AP1S3-204ENST00000409375 TRPM3Q9HCF6 1732 aaPredicted RBP20.78■□□□□ 0.92
AP1S3-204ENST00000409375 ANKRD26Q9UPS8 1709 aa20.78■□□□□ 0.92
AP1S3-204ENST00000409375 FYB1O15117 783 aa20.77■□□□□ 0.92
AP1S3-204ENST00000409375 XPCQ01831 940 aaPredicted RBP20.77■□□□□ 0.92
AP1S3-204ENST00000409375 ABTB2Q8N961 1025 aa20.77■□□□□ 0.92
AP1S3-204ENST00000409375 COG3Q96JB2 828 aa20.77■□□□□ 0.92
AP1S3-204ENST00000409375 TNS3Q68CZ2 1445 aa20.77■□□□□ 0.91
AP1S3-204ENST00000409375 ARHGEF10O15013 1369 aa20.76■□□□□ 0.91
AP1S3-204ENST00000409375 RALBP1Q15311 655 aa20.76■□□□□ 0.91
AP1S3-204ENST00000409375 CC2D1BQ5T0F9 858 aaKnown RBP20.76■□□□□ 0.91
AP1S3-204ENST00000409375 LMOD2Q6P5Q4 547 aa20.75■□□□□ 0.91
AP1S3-204ENST00000409375 MORC1Q86VD1 984 aa20.75■□□□□ 0.91
AP1S3-204ENST00000409375 NLRP13Q86W25 1043 aa20.75■□□□□ 0.91
AP1S3-204ENST00000409375 NME9Q86XW9 330 aa20.75■□□□□ 0.91
AP1S3-204ENST00000409375 DDX17Q92841 729 aaKnown RBP20.75■□□□□ 0.91
AP1S3-204ENST00000409375 PHLPP1O60346 1717 aa20.75■□□□□ 0.91
AP1S3-204ENST00000409375 USP31Q70CQ4 1352 aa20.74■□□□□ 0.91
AP1S3-204ENST00000409375 PIK3C2AO00443 1686 aa20.74■□□□□ 0.91
AP1S3-204ENST00000409375 LRRC59Q96AG4 307 aaKnown RBP20.74■□□□□ 0.91
AP1S3-204ENST00000409375 GGNBP2Q9H3C7 697 aa20.74■□□□□ 0.91
AP1S3-204ENST00000409375 SPATA31A3Q5VYP0 1347 aa20.74■□□□□ 0.91
AP1S3-204ENST00000409375 ALS2Q96Q42 1657 aa20.73■□□□□ 0.91
AP1S3-204ENST00000409375 NLRP6P59044 892 aa20.73■□□□□ 0.91
AP1S3-204ENST00000409375 CNGB1Q14028 1251 aaPredicted RBP20.73■□□□□ 0.91
AP1S3-204ENST00000409375 USP54Q70EL1 1684 aa20.73■□□□□ 0.91
AP1S3-204ENST00000409375 PRKRIP1Q9H875 184 aaPredicted RBP20.72■□□□□ 0.91
AP1S3-204ENST00000409375 OVOS2A0A0J9YW53 1432 aa20.71■□□□□ 0.91
AP1S3-204ENST00000409375 OVOS2Q6IE36 1432 aa20.71■□□□□ 0.91
AP1S3-204ENST00000409375 PARD3Q8TEW0 1356 aa20.71■□□□□ 0.91
AP1S3-204ENST00000409375 COL16A1Q07092 1604 aaPredicted RBP20.68■□□□□ 0.9
AP1S3-204ENST00000409375 KCNH5Q8NCM2 988 aa20.67■□□□□ 0.9
AP1S3-204ENST00000409375 MED1Q15648 1581 aaPredicted RBP20.67■□□□□ 0.9
AP1S3-204ENST00000409375 NUTM2GQ5VZR2 741 aa20.66■□□□□ 0.9
AP1S3-204ENST00000409375 MYBBP1AQ9BQG0 1328 aaKnown RBP20.66■□□□□ 0.9
AP1S3-204ENST00000409375 USP19O94966 1318 aa20.65■□□□□ 0.9
AP1S3-204ENST00000409375 ZRANB1Q9UGI0 708 aa20.65■□□□□ 0.9
AP1S3-204ENST00000409375 AATKQ6ZMQ8 1374 aa20.64■□□□□ 0.89
AP1S3-204ENST00000409375 MARF1Q9Y4F3 1742 aaKnown RBP20.64■□□□□ 0.89
AP1S3-204ENST00000409375 HAP1P54257 671 aaPredicted RBP20.63■□□□□ 0.89
AP1S3-204ENST00000409375 SLIT3O75094 1523 aa20.63■□□□□ 0.89
AP1S3-204ENST00000409375 TNNT2P45379 298 aaPredicted RBP20.62■□□□□ 0.89
AP1S3-204ENST00000409375 PNPLA6Q8IY17 1366 aa20.6■□□□□ 0.89
AP1S3-204ENST00000409375 COL22A1Q8NFW1 1626 aaPredicted RBP20.6■□□□□ 0.89
AP1S3-204ENST00000409375 PHRF1Q9P1Y6 1649 aaKnown RBP20.6■□□□□ 0.89
AP1S3-204ENST00000409375 JCADQ9P266 1359 aa20.6■□□□□ 0.89
AP1S3-204ENST00000409375 GCP02774 474 aa20.6■□□□□ 0.89
AP1S3-204ENST00000409375 PPP2R1AP30153 589 aa20.6■□□□□ 0.89
AP1S3-204ENST00000409375 MIER1Q8N108 512 aa20.6■□□□□ 0.89
AP1S3-204ENST00000409375 SHPRHQ149N8 1683 aa20.59■□□□□ 0.89
AP1S3-204ENST00000409375 FBXO41Q8TF61 875 aa20.59■□□□□ 0.89
AP1S3-204ENST00000409375 CRYBG1Q9Y4K1 1723 aa20.58■□□□□ 0.89
AP1S3-204ENST00000409375 SOX12O15370 315 aa20.58■□□□□ 0.89
AP1S3-204ENST00000409375 CFAP53Q96M91 514 aa20.58■□□□□ 0.89
AP1S3-204ENST00000409375 MAP2P11137 1827 aaKnown RBP20.57■□□□□ 0.88
AP1S3-204ENST00000409375 CCER2I3L3R5 266 aa20.57■□□□□ 0.88
AP1S3-204ENST00000409375 KIF24Q5T7B8 1368 aa20.57■□□□□ 0.88
AP1S3-204ENST00000409375 ABCA3Q99758 1704 aa20.56■□□□□ 0.88
AP1S3-204ENST00000409375 PLEKHG5O94827 1062 aa20.56■□□□□ 0.88
AP1S3-204ENST00000409375 HSPA1LP34931 641 aa20.56■□□□□ 0.88
AP1S3-204ENST00000409375 NFAT5O94916 1531 aa20.56■□□□□ 0.88
AP1S3-204ENST00000409375 SMG6Q86US8 1419 aaKnown RBP20.54■□□□□ 0.88
AP1S3-204ENST00000409375 AMPHP49418 695 aa20.54■□□□□ 0.88
AP1S3-204ENST00000409375 MTHFSP49914 203 aa20.54■□□□□ 0.88
AP1S3-204ENST00000409375 POLKQ9UBT6 870 aa20.54■□□□□ 0.88
AP1S3-204ENST00000409375 RTL1A6NKG5 1358 aa20.54■□□□□ 0.88
AP1S3-204ENST00000409375 LTN1O94822 1766 aa20.54■□□□□ 0.88
AP1S3-204ENST00000409375 CABLES1Q8TDN4 633 aa20.53■□□□□ 0.88
AP1S3-204ENST00000409375 CDK12Q9NYV4 1490 aaPredicted RBP20.53■□□□□ 0.88
AP1S3-204ENST00000409375 MAP3K19Q56UN5 1328 aa20.53■□□□□ 0.88
AP1S3-204ENST00000409375 SPATA31A6Q5VVP1 1343 aa20.53■□□□□ 0.88
AP1S3-204ENST00000409375 CPDO75976 1380 aa20.52■□□□□ 0.88
AP1S3-204ENST00000409375 FLT4P35916 1363 aa20.52■□□□□ 0.88
AP1S3-204ENST00000409375 PPM1GO15355 546 aaPredicted RBP20.52■□□□□ 0.88
AP1S3-204ENST00000409375 RRS1Q15050 365 aaKnown RBP20.52■□□□□ 0.88
AP1S3-204ENST00000409375 ARHGEF25Q86VW2 580 aa20.51■□□□□ 0.87
AP1S3-204ENST00000409375 MRS2Q9HD23 443 aa20.51■□□□□ 0.87
AP1S3-204ENST00000409375 EMILIN1Q9Y6C2 1016 aa20.51■□□□□ 0.87
AP1S3-204ENST00000409375 ABCC6O95255 1503 aa20.51■□□□□ 0.87
AP1S3-204ENST00000409375 ZBTB7CA1YPR0 619 aa20.5■□□□□ 0.87
AP1S3-204ENST00000409375 ZC3H6P61129 1189 aaKnown RBP20.5■□□□□ 0.87
AP1S3-204ENST00000409375 FBLN1P23142 703 aa20.49■□□□□ 0.87
AP1S3-204ENST00000409375 PRDM11Q9NQV5 511 aa20.49■□□□□ 0.87
AP1S3-204ENST00000409375 INSRP06213 1382 aa20.47■□□□□ 0.87
AP1S3-204ENST00000409375 KIAA0232Q92628 1395 aa20.47■□□□□ 0.87
AP1S3-204ENST00000409375 BLMP54132 1417 aaPredicted RBP20.47■□□□□ 0.87
AP1S3-204ENST00000409375 IP6K1Q92551 441 aa20.47■□□□□ 0.87
AP1S3-204ENST00000409375 NUDCQ9Y266 331 aa20.47■□□□□ 0.87
AP1S3-204ENST00000409375 NUTM2BA6NNL0 878 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms