RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 BAZ1BQ9UIG0 1483 aaKnown RBP16.38■□□□□ 0.21
AFF3-202ENST00000409236 ZWINTO95229 277 aa16.37■□□□□ 0.21
AFF3-202ENST00000409236 SPC24Q8NBT2 197 aa16.37■□□□□ 0.21
AFF3-202ENST00000409236 HIP1O00291 1037 aa16.37■□□□□ 0.21
AFF3-202ENST00000409236 TMEM132AQ24JP5 1023 aa16.37■□□□□ 0.21
AFF3-202ENST00000409236 DNAI2Q9GZS0 605 aa16.37■□□□□ 0.21
AFF3-202ENST00000409236 IRX3P78415 501 aaPredicted RBP16.37■□□□□ 0.21
AFF3-202ENST00000409236 ZNF397Q8NF99 534 aaPredicted RBP16.37■□□□□ 0.21
AFF3-202ENST00000409236 EIF4G1Q04637 1599 aaKnown RBP16.37■□□□□ 0.21
AFF3-202ENST00000409236 RNF214Q8ND24 703 aa16.37■□□□□ 0.21
AFF3-202ENST00000409236 CETN2P41208 172 aa16.36■□□□□ 0.21
AFF3-202ENST00000409236 ERC1Q8IUD2 1116 aa16.36■□□□□ 0.21
AFF3-202ENST00000409236 SLC3A2P08195 630 aaKnown RBP16.36■□□□□ 0.21
AFF3-202ENST00000409236 BRPF1P55201 1214 aaPredicted RBP16.36■□□□□ 0.21
AFF3-202ENST00000409236 CCDC97Q96F63 343 aaPredicted RBP16.36■□□□□ 0.21
AFF3-202ENST00000409236 GTF2A1P52655 376 aaPredicted RBP16.36■□□□□ 0.21
AFF3-202ENST00000409236 TNMDQ9H2S6 317 aa16.36■□□□□ 0.21
AFF3-202ENST00000409236 CPSF2Q9P2I0 782 aaKnown RBP16.36■□□□□ 0.21
AFF3-202ENST00000409236 CDC45O75419 566 aa16.35■□□□□ 0.21
AFF3-202ENST00000409236 KRT18P05783 430 aaKnown RBP16.35■□□□□ 0.21
AFF3-202ENST00000409236 TAF4BQ92750 862 aa16.35■□□□□ 0.21
AFF3-202ENST00000409236 IPO4Q8TEX9 1081 aaKnown RBP16.35■□□□□ 0.21
AFF3-202ENST00000409236 MYO15BQ96JP2 1530 aa16.35■□□□□ 0.21
AFF3-202ENST00000409236 G3BP1Q13283 466 aaKnown RBP eCLIP16.35■□□□□ 0.21
AFF3-202ENST00000409236 TIGD1Q96MW7 591 aa16.35■□□□□ 0.21
AFF3-202ENST00000409236 DDX46Q7L014 1031 aaKnown RBP16.34■□□□□ 0.21
AFF3-202ENST00000409236 ANKRD30AQ9BXX3 1397 aa16.34■□□□□ 0.21
AFF3-202ENST00000409236 DDX58O95786 925 aaKnown RBP16.34■□□□□ 0.21
AFF3-202ENST00000409236 POTEJP0CG39 1038 aa16.34■□□□□ 0.21
AFF3-202ENST00000409236 BMS1Q14692 1282 aaKnown RBP16.34■□□□□ 0.21
AFF3-202ENST00000409236 SAFB2Q14151 953 aaKnown RBP eCLIP16.33■□□□□ 0.21
AFF3-202ENST00000409236 CNTROBQ8N137 903 aa16.33■□□□□ 0.21
AFF3-202ENST00000409236 PDCL3Q9H2J4 239 aa16.33■□□□□ 0.21
AFF3-202ENST00000409236 KIF3CO14782 793 aa16.33■□□□□ 0.2
AFF3-202ENST00000409236 C1orf141Q5JVX7 400 aa16.33■□□□□ 0.2
AFF3-202ENST00000409236 EPB41L2O43491 1005 aaKnown RBP16.33■□□□□ 0.2
AFF3-202ENST00000409236 ANAPC15P60006 121 aa16.33■□□□□ 0.2
AFF3-202ENST00000409236 ZSCAN12O43309 604 aa16.33■□□□□ 0.2
AFF3-202ENST00000409236 MNAT1P51948 309 aa16.33■□□□□ 0.2
AFF3-202ENST00000409236 ARHGAP29Q52LW3 1261 aa16.33■□□□□ 0.2
AFF3-202ENST00000409236 IVLP07476 585 aa16.33■□□□□ 0.2
AFF3-202ENST00000409236 ANKRD1Q15327 319 aa16.32■□□□□ 0.2
AFF3-202ENST00000409236 TAOK3Q9H2K8 898 aa16.32■□□□□ 0.2
AFF3-202ENST00000409236 IFFO1Q0D2I5 559 aa16.32■□□□□ 0.2
AFF3-202ENST00000409236 NEBLO76041 1014 aa16.31■□□□□ 0.2
AFF3-202ENST00000409236 FILIP1Q7Z7B0 1213 aa16.31■□□□□ 0.2
AFF3-202ENST00000409236 DHX37Q8IY37 1157 aaKnown RBP16.31■□□□□ 0.2
AFF3-202ENST00000409236 KIF18AQ8NI77 898 aa16.31■□□□□ 0.2
AFF3-202ENST00000409236 NAP1L3Q99457 506 aaPredicted RBP16.31■□□□□ 0.2
AFF3-202ENST00000409236 CCDC9Q9Y3X0 531 aaKnown RBP16.31■□□□□ 0.2
AFF3-202ENST00000409236 AMPHP49418 695 aa16.31■□□□□ 0.2
AFF3-202ENST00000409236 CTR9Q6PD62 1173 aa16.31■□□□□ 0.2
AFF3-202ENST00000409236 GRPEL1Q9HAV7 217 aa16.31■□□□□ 0.2
AFF3-202ENST00000409236 BBXQ8WY36 941 aaPredicted RBP16.31■□□□□ 0.2
AFF3-202ENST00000409236 DNAAF4Q8WXU2 420 aa16.31■□□□□ 0.2
AFF3-202ENST00000409236 TMCO5BA8MYB1 307 aa16.31■□□□□ 0.2
AFF3-202ENST00000409236 DDX12PQ92771 950 aa16.31■□□□□ 0.2
AFF3-202ENST00000409236 BRPF3Q9ULD4 1205 aa16.31■□□□□ 0.2
AFF3-202ENST00000409236 ANKS4BQ8N8V4 417 aa16.3■□□□□ 0.2
AFF3-202ENST00000409236 SREK1Q8WXA9 508 aaKnown RBP16.3■□□□□ 0.2
AFF3-202ENST00000409236 SMTNL1A8MU46 457 aa16.3■□□□□ 0.2
AFF3-202ENST00000409236 CEP57L1Q8IYX8 460 aa16.3■□□□□ 0.2
AFF3-202ENST00000409236 FMN1Q68DA7 1419 aa16.3■□□□□ 0.2
AFF3-202ENST00000409236 HMGB1P09429 215 aaKnown RBP16.3■□□□□ 0.2
AFF3-202ENST00000409236 FOSBP53539 338 aa16.3■□□□□ 0.2
AFF3-202ENST00000409236 RNF187Q5TA31 235 aaPredicted RBP16.3■□□□□ 0.2
AFF3-202ENST00000409236 API5Q9BZZ5 524 aaKnown RBP16.3■□□□□ 0.2
AFF3-202ENST00000409236 NOL3O60936 208 aaKnown RBP16.29■□□□□ 0.2
AFF3-202ENST00000409236 FERP16591 822 aa16.29■□□□□ 0.2
AFF3-202ENST00000409236 CASQ1P31415 396 aa16.29■□□□□ 0.2
AFF3-202ENST00000409236 HSPA4P34932 840 aa16.29■□□□□ 0.2
AFF3-202ENST00000409236 STK38Q15208 465 aa16.29■□□□□ 0.2
AFF3-202ENST00000409236 TTC5Q8N0Z6 440 aa16.29■□□□□ 0.2
AFF3-202ENST00000409236 KIF5CO60282 957 aa16.29■□□□□ 0.2
AFF3-202ENST00000409236 CRBNQ96SW2 442 aa16.29■□□□□ 0.2
AFF3-202ENST00000409236 FMNL2Q96PY5 1086 aa16.29■□□□□ 0.2
AFF3-202ENST00000409236 HMGB1P1B2RPK0 211 aaPredicted RBP16.29■□□□□ 0.2
AFF3-202ENST00000409236 ESPNB1AK53 854 aa16.29■□□□□ 0.2
AFF3-202ENST00000409236 VPS36Q86VN1 386 aa16.29■□□□□ 0.2
AFF3-202ENST00000409236 WDR33Q9C0J8 1336 aaKnown RBP16.28■□□□□ 0.2
AFF3-202ENST00000409236 PPP1R12BO60237 982 aaPredicted RBP16.28■□□□□ 0.2
AFF3-202ENST00000409236 HOOK3Q86VS8 718 aa16.28■□□□□ 0.2
AFF3-202ENST00000409236 CCDC83Q8IWF9 413 aa16.28■□□□□ 0.2
AFF3-202ENST00000409236 ZSCAN30Q86W11 494 aa16.27■□□□□ 0.2
AFF3-202ENST00000409236 STK26Q9P289 416 aa16.27■□□□□ 0.19
AFF3-202ENST00000409236 WASHC2AQ641Q2 1341 aa16.26■□□□□ 0.19
AFF3-202ENST00000409236 RBM25P49756 843 aaKnown RBP16.26■□□□□ 0.19
AFF3-202ENST00000409236 WRNQ14191 1432 aaPredicted RBP eCLIP16.26■□□□□ 0.19
AFF3-202ENST00000409236 CCDC113Q9H0I3 377 aa16.26■□□□□ 0.19
AFF3-202ENST00000409236 SPA17Q15506 151 aa16.26■□□□□ 0.19
AFF3-202ENST00000409236 FAM177A1Q8N128 213 aaPredicted RBP16.26■□□□□ 0.19
AFF3-202ENST00000409236 TANGO6Q9C0B7 1094 aa16.25■□□□□ 0.19
AFF3-202ENST00000409236 NSRP1Q9H0G5 558 aaKnown RBP16.25■□□□□ 0.19
AFF3-202ENST00000409236 KRT85P78386 507 aa16.25■□□□□ 0.19
AFF3-202ENST00000409236 NAA15Q9BXJ9 866 aaKnown RBP16.25■□□□□ 0.19
AFF3-202ENST00000409236 CDKL5O76039 1030 aa16.25■□□□□ 0.19
AFF3-202ENST00000409236 CCDC6Q16204 474 aa16.25■□□□□ 0.19
AFF3-202ENST00000409236 RB1CC1Q8TDY2 1594 aa16.25■□□□□ 0.19
AFF3-202ENST00000409236 PTPN14Q15678 1187 aa16.24■□□□□ 0.19
AFF3-202ENST00000409236 PRPF40AO75400 957 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms