RNA–Protein interactions for RNA: ENST00000409080.5

ITGA6-202, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 5,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-202ENST00000409080 STARD3NLO95772 234 aa17.26■□□□□ 0.35
ITGA6-202ENST00000409080 TWISTNBQ3B726 338 aaPredicted RBP17.25■□□□□ 0.35
ITGA6-202ENST00000409080 NAIPQ13075 1403 aa17.25■□□□□ 0.35
ITGA6-202ENST00000409080 RAPGEF6Q8TEU7 1601 aa17.25■□□□□ 0.35
ITGA6-202ENST00000409080 ZNF518AQ6AHZ1 1483 aa17.25■□□□□ 0.35
ITGA6-202ENST00000409080 PLIN1O60240 522 aa17.25■□□□□ 0.35
ITGA6-202ENST00000409080 CLASRPQ8N2M8 674 aaKnown RBP17.25■□□□□ 0.35
ITGA6-202ENST00000409080 WASHC4Q2M389 1173 aa17.25■□□□□ 0.35
ITGA6-202ENST00000409080 NCBP3Q53F19 620 aaKnown RBP17.24■□□□□ 0.35
ITGA6-202ENST00000409080 CRBNQ96SW2 442 aa17.24■□□□□ 0.35
ITGA6-202ENST00000409080 ADAMTS8Q9UP79 889 aa17.24■□□□□ 0.35
ITGA6-202ENST00000409080 NFXL1Q6ZNB6 911 aa17.24■□□□□ 0.35
ITGA6-202ENST00000409080 CNNM1Q9NRU3 951 aa17.24■□□□□ 0.35
ITGA6-202ENST00000409080 GLIPR1L2Q4G1C9 344 aa17.24■□□□□ 0.35
ITGA6-202ENST00000409080 NINLQ9Y2I6 1382 aa17.24■□□□□ 0.35
ITGA6-202ENST00000409080 WAPLQ7Z5K2 1190 aa17.23■□□□□ 0.35
ITGA6-202ENST00000409080 RALYLQ86SE5 291 aaKnown RBP17.23■□□□□ 0.35
ITGA6-202ENST00000409080 ANO2Q9NQ90 1003 aa17.23■□□□□ 0.35
ITGA6-202ENST00000409080 ADAMTS2O95450 1211 aa17.23■□□□□ 0.35
ITGA6-202ENST00000409080 SLC3A2P08195 630 aaKnown RBP17.23■□□□□ 0.35
ITGA6-202ENST00000409080 AMOTQ4VCS5 1084 aa17.23■□□□□ 0.35
ITGA6-202ENST00000409080 ZNF652Q9Y2D9 606 aa17.23■□□□□ 0.35
ITGA6-202ENST00000409080 WASLO00401 505 aaPredicted RBP17.23■□□□□ 0.35
ITGA6-202ENST00000409080 FCHSD2O94868 740 aa17.22■□□□□ 0.35
ITGA6-202ENST00000409080 THOC2Q8NI27 1593 aaKnown RBP17.22■□□□□ 0.35
ITGA6-202ENST00000409080 CCDC47Q96A33 483 aaKnown RBP17.22■□□□□ 0.35
ITGA6-202ENST00000409080 TMOD3Q9NYL9 352 aa17.22■□□□□ 0.35
ITGA6-202ENST00000409080 KDM5BQ9UGL1 1544 aa17.22■□□□□ 0.35
ITGA6-202ENST00000409080 CT47B1P0C2W7 299 aaPredicted RBP17.22■□□□□ 0.35
ITGA6-202ENST00000409080 BTBD11A6QL63 1104 aa17.21■□□□□ 0.35
ITGA6-202ENST00000409080 PHF14O94880 888 aa17.21■□□□□ 0.35
ITGA6-202ENST00000409080 SLKQ9H2G2 1235 aaPredicted RBP17.21■□□□□ 0.35
ITGA6-202ENST00000409080 UHRF1BP1LA0JNW5 1464 aa17.21■□□□□ 0.35
ITGA6-202ENST00000409080 FOXO3O43524 673 aa17.21■□□□□ 0.34
ITGA6-202ENST00000409080 INTS3Q68E01 1043 aaKnown RBP17.21■□□□□ 0.34
ITGA6-202ENST00000409080 CCT4P50991 539 aaKnown RBP17.2■□□□□ 0.34
ITGA6-202ENST00000409080 NCOA1Q15788 1441 aa17.2■□□□□ 0.34
ITGA6-202ENST00000409080 UBAP1LF5GYI3 381 aa17.2■□□□□ 0.34
ITGA6-202ENST00000409080 RRS1Q15050 365 aaKnown RBP17.2■□□□□ 0.34
ITGA6-202ENST00000409080 CCDC158Q5M9N0 1113 aa17.2■□□□□ 0.34
ITGA6-202ENST00000409080 KRT28Q7Z3Y7 464 aa17.2■□□□□ 0.34
ITGA6-202ENST00000409080 FAM161AQ3B820 660 aa17.2■□□□□ 0.34
ITGA6-202ENST00000409080 CCDC43Q96MW1 224 aaKnown RBP17.2■□□□□ 0.34
ITGA6-202ENST00000409080 NBPF8Q3BBV2 869 aa17.19■□□□□ 0.34
ITGA6-202ENST00000409080 GNAT3A8MTJ3 354 aa17.19■□□□□ 0.34
ITGA6-202ENST00000409080 MPHOSPH8Q99549 860 aa17.19■□□□□ 0.34
ITGA6-202ENST00000409080 A2MP01023 1474 aa17.19■□□□□ 0.34
ITGA6-202ENST00000409080 HIP1O00291 1037 aa17.19■□□□□ 0.34
ITGA6-202ENST00000409080 NSD3Q9BZ95 1437 aa17.19■□□□□ 0.34
ITGA6-202ENST00000409080 ATP10BO94823 1461 aa17.18■□□□□ 0.34
ITGA6-202ENST00000409080 SART3Q15020 963 aaKnown RBP17.18■□□□□ 0.34
ITGA6-202ENST00000409080 CNTROBQ8N137 903 aa17.18■□□□□ 0.34
ITGA6-202ENST00000409080 SURF6O75683 361 aaKnown RBP17.18■□□□□ 0.34
ITGA6-202ENST00000409080 SRCIN1Q9C0H9 1055 aa17.18■□□□□ 0.34
ITGA6-202ENST00000409080 GNAI2P04899 355 aa17.18■□□□□ 0.34
ITGA6-202ENST00000409080 CCAR1Q8IX12 1150 aaKnown RBP17.18■□□□□ 0.34
ITGA6-202ENST00000409080 CEP89Q96ST8 783 aa17.18■□□□□ 0.34
ITGA6-202ENST00000409080 EXOC6Q8TAG9 804 aa17.17■□□□□ 0.34
ITGA6-202ENST00000409080 EXOC5O00471 708 aa17.17■□□□□ 0.34
ITGA6-202ENST00000409080 TPM2P07951 284 aa17.17■□□□□ 0.34
ITGA6-202ENST00000409080 WDR63Q8IWG1 891 aa17.17■□□□□ 0.34
ITGA6-202ENST00000409080 FYB1O15117 783 aa17.17■□□□□ 0.34
ITGA6-202ENST00000409080 SLC4A2P04920 1241 aa17.17■□□□□ 0.34
ITGA6-202ENST00000409080 MSNP26038 577 aaKnown RBP17.17■□□□□ 0.34
ITGA6-202ENST00000409080 SAFBQ15424 915 aaKnown RBP eCLIP17.17■□□□□ 0.34
ITGA6-202ENST00000409080 EXOSC9Q06265 439 aaKnown RBP17.17■□□□□ 0.34
ITGA6-202ENST00000409080 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.17■□□□□ 0.34
ITGA6-202ENST00000409080 ZPR1O75312 459 aa17.17■□□□□ 0.34
ITGA6-202ENST00000409080 CCDC57Q2TAC2 916 aa17.16■□□□□ 0.34
ITGA6-202ENST00000409080 ADAMTS12P58397 1594 aa17.16■□□□□ 0.34
ITGA6-202ENST00000409080 MCTP1Q6DN14 999 aa17.16■□□□□ 0.34
ITGA6-202ENST00000409080 TPD52L1Q16890 204 aaPredicted RBP17.16■□□□□ 0.34
ITGA6-202ENST00000409080 TTC39AQ5SRH9 613 aa17.16■□□□□ 0.34
ITGA6-202ENST00000409080 FSD1Q9BTV5 496 aa17.16■□□□□ 0.34
ITGA6-202ENST00000409080 DUOX2Q9NRD8 1548 aa17.15■□□□□ 0.34
ITGA6-202ENST00000409080 ABCC10Q5T3U5 1492 aa17.15■□□□□ 0.34
ITGA6-202ENST00000409080 ITSN2Q9NZM3 1697 aa17.15■□□□□ 0.34
ITGA6-202ENST00000409080 GPATCH8Q9UKJ3 1502 aaKnown RBP17.15■□□□□ 0.34
ITGA6-202ENST00000409080 NOS1P29475 1434 aa17.15■□□□□ 0.34
ITGA6-202ENST00000409080 XBP1P17861 261 aa17.15■□□□□ 0.34
ITGA6-202ENST00000409080 ZNF428Q96B54 188 aa17.15■□□□□ 0.34
ITGA6-202ENST00000409080 BRMS1Q9HCU9 246 aa17.14■□□□□ 0.33
ITGA6-202ENST00000409080 NPHP3Q7Z494 1330 aa17.14■□□□□ 0.33
ITGA6-202ENST00000409080 MYL6BP14649 208 aa17.14■□□□□ 0.33
ITGA6-202ENST00000409080 IKQ13123 557 aaPredicted RBP17.14■□□□□ 0.33
ITGA6-202ENST00000409080 CREBRFQ8IUR6 639 aa17.14■□□□□ 0.33
ITGA6-202ENST00000409080 WDR62O43379 1518 aa17.13■□□□□ 0.33
ITGA6-202ENST00000409080 C14orf93Q9H972 538 aaKnown RBP17.13■□□□□ 0.33
ITGA6-202ENST00000409080 NFE2L2Q16236 605 aa17.13■□□□□ 0.33
ITGA6-202ENST00000409080 SAMD1Q6SPF0 538 aaPredicted RBP17.13■□□□□ 0.33
ITGA6-202ENST00000409080 PSMA5P28066 241 aa17.12■□□□□ 0.33
ITGA6-202ENST00000409080 HOOK1Q9UJC3 728 aaKnown RBP17.12■□□□□ 0.33
ITGA6-202ENST00000409080 IGHMBP2P38935 993 aaKnown RBP17.12■□□□□ 0.33
ITGA6-202ENST00000409080 ZSCAN25Q6NSZ9 544 aa17.12■□□□□ 0.33
ITGA6-202ENST00000409080 ADGRF5Q8IZF2 1346 aa17.12■□□□□ 0.33
ITGA6-202ENST00000409080 UGGT2Q9NYU1 1516 aa17.12■□□□□ 0.33
ITGA6-202ENST00000409080 HSP90AB3PQ58FF7 597 aa17.11■□□□□ 0.33
ITGA6-202ENST00000409080 FOXD4L1Q9NU39 408 aa17.11■□□□□ 0.33
ITGA6-202ENST00000409080 TTC21BQ7Z4L5 1316 aa17.11■□□□□ 0.33
ITGA6-202ENST00000409080 NACAP1Q9BZK3 213 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms