RNA–Protein interactions for RNA: ENST00000407449.5

PIKFYVE-204, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-204ENST00000407449 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.64■■□□□ 1.06
PIKFYVE-204ENST00000407449 TOPAZ1Q8N9V7 1692 aa21.64■■□□□ 1.05
PIKFYVE-204ENST00000407449 LTKP29376 864 aa21.64■■□□□ 1.05
PIKFYVE-204ENST00000407449 NUDT16Q96DE0 195 aaKnown RBP21.64■■□□□ 1.05
PIKFYVE-204ENST00000407449 FANCIQ9NVI1 1328 aa21.63■■□□□ 1.05
PIKFYVE-204ENST00000407449 NEUROD2Q15784 382 aa21.62■■□□□ 1.05
PIKFYVE-204ENST00000407449 EID1Q9Y6B2 187 aa21.62■■□□□ 1.05
PIKFYVE-204ENST00000407449 DIP2AQ14689 1571 aa21.62■■□□□ 1.05
PIKFYVE-204ENST00000407449 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.62■■□□□ 1.055e-8■□□□□ 11.2
PIKFYVE-204ENST00000407449 CCDC61Q9Y6R9 512 aa21.62■■□□□ 1.05
PIKFYVE-204ENST00000407449 U2SURPO15042 1029 aaKnown RBP21.61■■□□□ 1.05
PIKFYVE-204ENST00000407449 MAP2P11137 1827 aaKnown RBP21.61■■□□□ 1.05
PIKFYVE-204ENST00000407449 DIAPH1O60610 1272 aaKnown RBP21.6■■□□□ 1.05
PIKFYVE-204ENST00000407449 PLEKHF1Q96S99 279 aa21.6■■□□□ 1.05
PIKFYVE-204ENST00000407449 PTPRUQ92729 1446 aa21.58■■□□□ 1.05
PIKFYVE-204ENST00000407449 NRKQ7Z2Y5 1582 aa21.58■■□□□ 1.04
PIKFYVE-204ENST00000407449 PNNQ9H307 717 aaKnown RBP21.58■■□□□ 1.04
PIKFYVE-204ENST00000407449 MAPK8IP3Q9UPT6 1336 aa21.57■■□□□ 1.04
PIKFYVE-204ENST00000407449 TRHP20396 242 aaPredicted RBP21.57■■□□□ 1.04
PIKFYVE-204ENST00000407449 PRR36Q9H6K5 1346 aa21.57■■□□□ 1.04
PIKFYVE-204ENST00000407449 CDK12Q9NYV4 1490 aaPredicted RBP21.57■■□□□ 1.04
PIKFYVE-204ENST00000407449 AATKQ6ZMQ8 1374 aa21.56■■□□□ 1.04
PIKFYVE-204ENST00000407449 BCAR3O75815 825 aa21.56■■□□□ 1.04
PIKFYVE-204ENST00000407449 MYH16Q9H6N6 1097 aa21.56■■□□□ 1.04
PIKFYVE-204ENST00000407449 PTCH1Q13635 1447 aa21.56■■□□□ 1.04
PIKFYVE-204ENST00000407449 LRRC7Q96NW7 1537 aa21.56■■□□□ 1.04
PIKFYVE-204ENST00000407449 POLKQ9UBT6 870 aa21.56■■□□□ 1.04
PIKFYVE-204ENST00000407449 TCERG1O14776 1098 aaKnown RBP21.55■■□□□ 1.04
PIKFYVE-204ENST00000407449 ZNF692Q9BU19 519 aaPredicted RBP21.55■■□□□ 1.04
PIKFYVE-204ENST00000407449 TMPOP42166 694 aaKnown RBP21.54■■□□□ 1.04
PIKFYVE-204ENST00000407449 NME9Q86XW9 330 aa21.54■■□□□ 1.04
PIKFYVE-204ENST00000407449 THEMISQ8N1K5 641 aaPredicted RBP21.54■■□□□ 1.04
PIKFYVE-204ENST00000407449 TBX22Q9Y458 520 aa21.54■■□□□ 1.04
PIKFYVE-204ENST00000407449 SLC26A8Q96RN1 970 aa21.53■■□□□ 1.04
PIKFYVE-204ENST00000407449 NCKAP5LQ9HCH0 1330 aa21.53■■□□□ 1.04
PIKFYVE-204ENST00000407449 XRN1Q8IZH2 1706 aaKnown RBP21.53■■□□□ 1.04
PIKFYVE-204ENST00000407449 PDE3AQ14432 1141 aa21.52■■□□□ 1.04
PIKFYVE-204ENST00000407449 CEP170BQ9Y4F5 1589 aaPredicted RBP21.52■■□□□ 1.04
PIKFYVE-204ENST00000407449 COG3Q96JB2 828 aa21.52■■□□□ 1.03
PIKFYVE-204ENST00000407449 KDM2BQ8NHM5 1336 aa21.51■■□□□ 1.03
PIKFYVE-204ENST00000407449 FCHSD2O94868 740 aa21.51■■□□□ 1.03
PIKFYVE-204ENST00000407449 RIMS1Q86UR5 1692 aaKnown RBP21.51■■□□□ 1.03
PIKFYVE-204ENST00000407449 RARSP54136 660 aaKnown RBP21.5■■□□□ 1.03
PIKFYVE-204ENST00000407449 IL16Q14005 1332 aa21.5■■□□□ 1.03
PIKFYVE-204ENST00000407449 CENPQQ7L2Z9 268 aaPredicted RBP21.5■■□□□ 1.03
PIKFYVE-204ENST00000407449 TRIM35Q9UPQ4 493 aa21.49■■□□□ 1.03
PIKFYVE-204ENST00000407449 PLEKHG3A1L390 1219 aa21.49■■□□□ 1.03
PIKFYVE-204ENST00000407449 MS4A1P11836 297 aa21.49■■□□□ 1.03
PIKFYVE-204ENST00000407449 PLPPR3Q6T4P5 718 aa21.49■■□□□ 1.03
PIKFYVE-204ENST00000407449 AMOTL2Q9Y2J4 779 aa21.49■■□□□ 1.03
PIKFYVE-204ENST00000407449 CT47B1P0C2W7 299 aaPredicted RBP21.48■■□□□ 1.03
PIKFYVE-204ENST00000407449 CANXP27824 592 aaKnown RBP21.48■■□□□ 1.03
PIKFYVE-204ENST00000407449 PPM1GO15355 546 aaPredicted RBP21.47■■□□□ 1.03
PIKFYVE-204ENST00000407449 RSPH6AQ9H0K4 717 aa21.47■■□□□ 1.03
PIKFYVE-204ENST00000407449 ZRANB1Q9UGI0 708 aa21.47■■□□□ 1.03
PIKFYVE-204ENST00000407449 NALCNQ8IZF0 1738 aa21.47■■□□□ 1.03
PIKFYVE-204ENST00000407449 EMILIN1Q9Y6C2 1016 aa21.47■■□□□ 1.03
PIKFYVE-204ENST00000407449 USP6P35125 1406 aa21.47■■□□□ 1.03
PIKFYVE-204ENST00000407449 FBLN1P23142 703 aa21.46■■□□□ 1.03
PIKFYVE-204ENST00000407449 ZNF142P52746 1687 aaPredicted RBP21.46■■□□□ 1.03
PIKFYVE-204ENST00000407449 RIPK4P57078 832 aa21.45■■□□□ 1.02
PIKFYVE-204ENST00000407449 ACEP12821 1306 aa21.45■■□□□ 1.02
PIKFYVE-204ENST00000407449 TTC21BQ7Z4L5 1316 aa21.45■■□□□ 1.02
PIKFYVE-204ENST00000407449 OVOS2A0A0J9YW53 1432 aa21.45■■□□□ 1.02
PIKFYVE-204ENST00000407449 OVOS2Q6IE36 1432 aa21.45■■□□□ 1.02
PIKFYVE-204ENST00000407449 NEFMP07197 916 aa21.44■■□□□ 1.02
PIKFYVE-204ENST00000407449 IL13P35225 146 aa21.44■■□□□ 1.02
PIKFYVE-204ENST00000407449 PRKAR2BP31323 418 aa21.43■■□□□ 1.02
PIKFYVE-204ENST00000407449 PIK3R4Q99570 1358 aa21.43■■□□□ 1.02
PIKFYVE-204ENST00000407449 SSH2Q76I76 1423 aa21.41■■□□□ 1.02
PIKFYVE-204ENST00000407449 FRAT1Q92837 279 aaPredicted RBP21.41■■□□□ 1.02
PIKFYVE-204ENST00000407449 TSR2Q969E8 191 aaKnown RBP21.41■■□□□ 1.02
PIKFYVE-204ENST00000407449 MSH5O43196 834 aa21.4■■□□□ 1.02
PIKFYVE-204ENST00000407449 AAMPQ13685 434 aa21.4■■□□□ 1.02
PIKFYVE-204ENST00000407449 ADAMTSL3P82987 1691 aa21.4■■□□□ 1.02
PIKFYVE-204ENST00000407449 RGPD8O14715 1765 aaPredicted RBP21.39■■□□□ 1.02
PIKFYVE-204ENST00000407449 NFE2L2Q16236 605 aa21.39■■□□□ 1.02
PIKFYVE-204ENST00000407449 PANK1Q8TE04 598 aa21.39■■□□□ 1.02
PIKFYVE-204ENST00000407449 RRS1Q15050 365 aaKnown RBP21.39■■□□□ 1.01
PIKFYVE-204ENST00000407449 FMN2Q9NZ56 1722 aa21.38■■□□□ 1.01
PIKFYVE-204ENST00000407449 ANKARQ7Z5J8 1434 aa21.38■■□□□ 1.01
PIKFYVE-204ENST00000407449 EXOSC9Q06265 439 aaKnown RBP21.38■■□□□ 1.01
PIKFYVE-204ENST00000407449 COG6Q9Y2V7 657 aa21.38■■□□□ 1.01
PIKFYVE-204ENST00000407449 TTC21AQ8NDW8 1320 aa21.38■■□□□ 1.01
PIKFYVE-204ENST00000407449 USP31Q70CQ4 1352 aa21.38■■□□□ 1.01
PIKFYVE-204ENST00000407449 NUTM2FA1L443 756 aa21.37■■□□□ 1.01
PIKFYVE-204ENST00000407449 HMOX1P09601 288 aa21.37■■□□□ 1.01
PIKFYVE-204ENST00000407449 CLUAP1Q96AJ1 413 aa21.37■■□□□ 1.01
PIKFYVE-204ENST00000407449 PDE4AP27815 886 aa21.36■■□□□ 1.01
PIKFYVE-204ENST00000407449 BCL2L13Q9BXK5 485 aa21.36■■□□□ 1.01
PIKFYVE-204ENST00000407449 DLG5Q8TDM6 1919 aa21.36■■□□□ 1.01
PIKFYVE-204ENST00000407449 PEAK1Q9H792 1746 aa21.35■■□□□ 1.01
PIKFYVE-204ENST00000407449 CALD1Q05682 793 aaKnown RBP21.35■■□□□ 1.01
PIKFYVE-204ENST00000407449 PHACTR3Q96KR7 559 aa21.35■■□□□ 1.01
PIKFYVE-204ENST00000407449 ANP32EQ9BTT0 268 aa21.35■■□□□ 1.01
PIKFYVE-204ENST00000407449 BACH2Q9BYV9 841 aa21.35■■□□□ 1.01
PIKFYVE-204ENST00000407449 CHD2O14647 1828 aaKnown RBP21.34■■□□□ 1.01
PIKFYVE-204ENST00000407449 ZKSCAN2Q63HK3 967 aa21.34■■□□□ 1.01
PIKFYVE-204ENST00000407449 RGPD1P0DJD0 1748 aa21.33■■□□□ 1.01
PIKFYVE-204ENST00000407449 ANP32AP39687 249 aaKnown RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms