RNA–Protein interactions for RNA: ENST00000406848.1

GAPDHP42-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 42, humanhuman

BASIC

Gene GAPDHP42, Length 981 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP42-201ENST00000406848 NLRP1Q9C000 1473 aa8.45□□□□□ -1.06
GAPDHP42-201ENST00000406848 VWDEQ8N2E2 1590 aa8.44□□□□□ -1.06
GAPDHP42-201ENST00000406848 ARHGEF1Q92888 912 aaKnown RBP8.44□□□□□ -1.06
GAPDHP42-201ENST00000406848 TNRQ92752 1358 aa8.44□□□□□ -1.06
GAPDHP42-201ENST00000406848 HFM1A2PYH4 1435 aa8.44□□□□□ -1.06
GAPDHP42-201ENST00000406848 MROH1Q8NDA8 1641 aa8.43□□□□□ -1.06
GAPDHP42-201ENST00000406848 SPDYE16A6NNV3 312 aaPredicted RBP8.43□□□□□ -1.06
GAPDHP42-201ENST00000406848 HRCP23327 699 aa8.43□□□□□ -1.06
GAPDHP42-201ENST00000406848 ITGAEP38570 1179 aa8.43□□□□□ -1.06
GAPDHP42-201ENST00000406848 THEMISQ8N1K5 641 aaPredicted RBP8.43□□□□□ -1.06
GAPDHP42-201ENST00000406848 SLC52A1Q9NWF4 448 aa8.43□□□□□ -1.06
GAPDHP42-201ENST00000406848 PTGER2P43116 358 aa8.42□□□□□ -1.06
GAPDHP42-201ENST00000406848 PSEN2P49810 448 aa8.42□□□□□ -1.06
GAPDHP42-201ENST00000406848 BRPF1P55201 1214 aaPredicted RBP8.42□□□□□ -1.06
GAPDHP42-201ENST00000406848 ADAM33Q9BZ11 813 aa8.42□□□□□ -1.06
GAPDHP42-201ENST00000406848 A2ML1A8K2U0 1454 aa8.42□□□□□ -1.06
GAPDHP42-201ENST00000406848 SPATA31D1Q6ZQQ2 1576 aa8.42□□□□□ -1.06
GAPDHP42-201ENST00000406848 UNC13BO14795 1591 aa8.41□□□□□ -1.06
GAPDHP42-201ENST00000406848 PLA2R1Q13018 1463 aa8.41□□□□□ -1.06
GAPDHP42-201ENST00000406848 NAIPQ13075 1403 aa8.41□□□□□ -1.06
GAPDHP42-201ENST00000406848 NUP155O75694 1391 aa8.41□□□□□ -1.06
GAPDHP42-201ENST00000406848 ZDHHC16Q969W1 377 aa8.41□□□□□ -1.06
GAPDHP42-201ENST00000406848 CAMSAP1Q5T5Y3 1602 aa8.4□□□□□ -1.06
GAPDHP42-201ENST00000406848 ERVK-7P63135 1459 aa8.4□□□□□ -1.06
GAPDHP42-201ENST00000406848 GRXCR2A6NFK2 248 aa8.4□□□□□ -1.06
GAPDHP42-201ENST00000406848 PHF14O94880 888 aa8.4□□□□□ -1.06
GAPDHP42-201ENST00000406848 HDGFP51858 240 aaKnown RBP8.4□□□□□ -1.06
GAPDHP42-201ENST00000406848 DMRTA1Q5VZB9 504 aa8.4□□□□□ -1.06
GAPDHP42-201ENST00000406848 KCNK17Q96T54 332 aa8.4□□□□□ -1.06
GAPDHP42-201ENST00000406848 BCL2L12Q9HB09 334 aa8.4□□□□□ -1.06
GAPDHP42-201ENST00000406848 ZNF142P52746 1687 aaPredicted RBP8.4□□□□□ -1.07
GAPDHP42-201ENST00000406848 PTPRTO14522 1441 aa8.39□□□□□ -1.07
GAPDHP42-201ENST00000406848 ARHGAP33O14559 1287 aa8.39□□□□□ -1.07
GAPDHP42-201ENST00000406848 PBX2P40425 430 aa8.39□□□□□ -1.07
GAPDHP42-201ENST00000406848 FBXO31Q5XUX0 539 aaPredicted RBP8.39□□□□□ -1.07
GAPDHP42-201ENST00000406848 TET3O43151 1660 aa8.39□□□□□ -1.07
GAPDHP42-201ENST00000406848 GCC2Q8IWJ2 1684 aa8.39□□□□□ -1.07
GAPDHP42-201ENST00000406848 CEP170BQ9Y4F5 1589 aaPredicted RBP8.39□□□□□ -1.07
GAPDHP42-201ENST00000406848 EFCAB6Q5THR3 1501 aa8.39□□□□□ -1.07
GAPDHP42-201ENST00000406848 NOS1P29475 1434 aa8.38□□□□□ -1.07
GAPDHP42-201ENST00000406848 MLLT3P42568 568 aaPredicted RBP8.38□□□□□ -1.07
GAPDHP42-201ENST00000406848 PRIM1P49642 420 aaKnown RBP8.38□□□□□ -1.07
GAPDHP42-201ENST00000406848 LSM11P83369 360 aaKnown RBP eCLIP8.38□□□□□ -1.07
GAPDHP42-201ENST00000406848 TYW1BQ6NUM6 668 aa8.38□□□□□ -1.07
GAPDHP42-201ENST00000406848 ANKRD13DQ6ZTN6 518 aa8.38□□□□□ -1.07
GAPDHP42-201ENST00000406848 ANKLE2Q86XL3 938 aa8.38□□□□□ -1.07
GAPDHP42-201ENST00000406848 RBM33Q96EV2 1170 aaKnown RBP8.38□□□□□ -1.07
GAPDHP42-201ENST00000406848 PLSCR2Q9NRY7 297 aa8.38□□□□□ -1.07
GAPDHP42-201ENST00000406848 IQGAP3Q86VI3 1631 aa8.38□□□□□ -1.07
GAPDHP42-201ENST00000406848 MYO3AQ8NEV4 1616 aa8.38□□□□□ -1.07
GAPDHP42-201ENST00000406848 CEP152O94986 1710 aa8.37□□□□□ -1.07
GAPDHP42-201ENST00000406848 KDM5AP29375 1690 aaKnown RBP8.37□□□□□ -1.07
GAPDHP42-201ENST00000406848 UGGT1Q9NYU2 1555 aa8.37□□□□□ -1.07
GAPDHP42-201ENST00000406848 SETD5Q9C0A6 1442 aa8.37□□□□□ -1.07
GAPDHP42-201ENST00000406848 SEMA3EO15041 775 aa8.36□□□□□ -1.07
GAPDHP42-201ENST00000406848 HSPA2P54652 639 aa8.36□□□□□ -1.07
GAPDHP42-201ENST00000406848 EPAS1Q99814 870 aa8.36□□□□□ -1.07
GAPDHP42-201ENST00000406848 EID1Q9Y6B2 187 aa8.36□□□□□ -1.07
GAPDHP42-201ENST00000406848 PTPREP23469 700 aa8.35□□□□□ -1.07
GAPDHP42-201ENST00000406848 IDI1Q13907 227 aa8.35□□□□□ -1.07
GAPDHP42-201ENST00000406848 SPNS2Q8IVW8 549 aa8.35□□□□□ -1.07
GAPDHP42-201ENST00000406848 FBXW7Q969H0 707 aa8.35□□□□□ -1.07
GAPDHP42-201ENST00000406848 TRIM52Q96A61 297 aa8.35□□□□□ -1.07
GAPDHP42-201ENST00000406848 OSBPP22059 807 aa8.34□□□□□ -1.07
GAPDHP42-201ENST00000406848 EN1Q05925 392 aaPredicted RBP8.34□□□□□ -1.07
GAPDHP42-201ENST00000406848 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.34□□□□□ -1.07
GAPDHP42-201ENST00000406848 MED14O60244 1454 aa8.33□□□□□ -1.08
GAPDHP42-201ENST00000406848 COL9A1P20849 921 aa8.33□□□□□ -1.08
GAPDHP42-201ENST00000406848 TSR1Q2NL82 804 aaKnown RBP8.33□□□□□ -1.08
GAPDHP42-201ENST00000406848 C6orf132Q5T0Z8 1188 aa8.33□□□□□ -1.08
GAPDHP42-201ENST00000406848 SLIT1O75093 1534 aa8.33□□□□□ -1.08
GAPDHP42-201ENST00000406848 ARHGAP23Q9P227 1491 aa8.32□□□□□ -1.08
GAPDHP42-201ENST00000406848 MAP3K7O43318 606 aa8.32□□□□□ -1.08
GAPDHP42-201ENST00000406848 ZC3H15Q8WU90 426 aaKnown RBP8.32□□□□□ -1.08
GAPDHP42-201ENST00000406848 TMEM2Q9UHN6 1383 aa8.32□□□□□ -1.08
GAPDHP42-201ENST00000406848 CFAP65Q6ZU64 1925 aaKnown RBP8.31□□□□□ -1.08
GAPDHP42-201ENST00000406848 E9PCH4 1651 aa8.31□□□□□ -1.08
GAPDHP42-201ENST00000406848 STRCQ7RTU9 1775 aa8.31□□□□□ -1.08
GAPDHP42-201ENST00000406848 ADGRD1Q6QNK2 874 aa8.31□□□□□ -1.08
GAPDHP42-201ENST00000406848 TXNDC2Q86VQ3 553 aa8.31□□□□□ -1.08
GAPDHP42-201ENST00000406848 MPHOSPH9Q99550 1183 aa8.31□□□□□ -1.08
GAPDHP42-201ENST00000406848 SCAF11Q99590 1463 aaKnown RBP8.31□□□□□ -1.08
GAPDHP42-201ENST00000406848 RPGRIP1LQ68CZ1 1315 aa8.3□□□□□ -1.08
GAPDHP42-201ENST00000406848 PIK3C2BO00750 1634 aa8.3□□□□□ -1.08
GAPDHP42-201ENST00000406848 UBR1Q8IWV7 1749 aa8.3□□□□□ -1.08
GAPDHP42-201ENST00000406848 NEUROD2Q15784 382 aa8.3□□□□□ -1.08
GAPDHP42-201ENST00000406848 STAC3Q96MF2 364 aa8.3□□□□□ -1.08
GAPDHP42-201ENST00000406848 ZBED2Q9BTP6 218 aa8.3□□□□□ -1.08
GAPDHP42-201ENST00000406848 CDHR5Q9HBB8 845 aa8.3□□□□□ -1.08
GAPDHP42-201ENST00000406848 SYNMO15061 1565 aa8.3□□□□□ -1.08
GAPDHP42-201ENST00000406848 NPHP4O75161 1426 aaPredicted RBP8.29□□□□□ -1.08
GAPDHP42-201ENST00000406848 ADGRB3O60242 1522 aa8.29□□□□□ -1.08
GAPDHP42-201ENST00000406848 PPP1R3GB7ZBB8 358 aa8.29□□□□□ -1.08
GAPDHP42-201ENST00000406848 VPS9D1Q9Y2B5 631 aa8.29□□□□□ -1.08
GAPDHP42-201ENST00000406848 RAB3GAP2Q9H2M9 1393 aa8.29□□□□□ -1.08
GAPDHP42-201ENST00000406848 IQSEC2Q5JU85 1478 aa8.29□□□□□ -1.08
GAPDHP42-201ENST00000406848 TRPM2O94759 1503 aa8.29□□□□□ -1.08
GAPDHP42-201ENST00000406848 TESPA1A2RU30 521 aaPredicted RBP8.28□□□□□ -1.08
GAPDHP42-201ENST00000406848 TRIM26Q12899 539 aaPredicted RBP8.28□□□□□ -1.08
GAPDHP42-201ENST00000406848 MMRN1Q13201 1228 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms