RNA–Protein interactions for RNA: ENST00000406772.5

GGA1-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2 BASIC

Gene GGA1, Length 3,205 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-206ENST00000406772 KDM5AP29375 1690 aaKnown RBP18.34■□□□□ 0.53
GGA1-206ENST00000406772 ATAD2Q6PL18 1390 aa18.34■□□□□ 0.53
GGA1-206ENST00000406772 PRKAR2BP31323 418 aa18.34■□□□□ 0.53
GGA1-206ENST00000406772 NUCB1Q02818 461 aa18.34■□□□□ 0.53
GGA1-206ENST00000406772 UNC13BO14795 1591 aa18.34■□□□□ 0.53
GGA1-206ENST00000406772 EVC2Q86UK5 1308 aa18.34■□□□□ 0.53
GGA1-206ENST00000406772 RRP9O43818 475 aaKnown RBP18.34■□□□□ 0.53
GGA1-206ENST00000406772 RBM27Q9P2N5 1060 aaKnown RBP18.34■□□□□ 0.53
GGA1-206ENST00000406772 IQGAP3Q86VI3 1631 aa18.34■□□□□ 0.53
GGA1-206ENST00000406772 PTPRTO14522 1441 aa18.33■□□□□ 0.53
GGA1-206ENST00000406772 DIAPH1O60610 1272 aaKnown RBP18.33■□□□□ 0.52
GGA1-206ENST00000406772 ERCC6L2Q5T890 1561 aa18.32■□□□□ 0.52
GGA1-206ENST00000406772 KIF16BQ96L93 1317 aa18.32■□□□□ 0.52
GGA1-206ENST00000406772 PKP1Q13835 747 aa18.32■□□□□ 0.52
GGA1-206ENST00000406772 RAB3GAP1Q15042 981 aa18.32■□□□□ 0.52
GGA1-206ENST00000406772 TSPYL6Q8N831 410 aa18.32■□□□□ 0.52
GGA1-206ENST00000406772 PRPF40AO75400 957 aaKnown RBP18.32■□□□□ 0.52
GGA1-206ENST00000406772 XPCQ01831 940 aaPredicted RBP18.32■□□□□ 0.52
GGA1-206ENST00000406772 C16orf71Q8IYS4 520 aaPredicted RBP18.32■□□□□ 0.52
GGA1-206ENST00000406772 LAMC1P11047 1609 aa18.31■□□□□ 0.52
GGA1-206ENST00000406772 SKOR2Q2VWA4 1001 aaPredicted RBP18.31■□□□□ 0.52
GGA1-206ENST00000406772 STAC3Q96MF2 364 aa18.31■□□□□ 0.52
GGA1-206ENST00000406772 BAG4O95429 457 aaKnown RBP18.3■□□□□ 0.52
GGA1-206ENST00000406772 PTMAP06454 111 aaKnown RBP18.29■□□□□ 0.52
GGA1-206ENST00000406772 CCDC27Q2M243 656 aa18.29■□□□□ 0.52
GGA1-206ENST00000406772 PHF23Q9BUL5 403 aaPredicted RBP18.29■□□□□ 0.52
GGA1-206ENST00000406772 CLTCL1P53675 1640 aa18.29■□□□□ 0.52
GGA1-206ENST00000406772 SOX12O15370 315 aa18.29■□□□□ 0.52
GGA1-206ENST00000406772 SMARCA5O60264 1052 aaPredicted RBP18.29■□□□□ 0.52
GGA1-206ENST00000406772 DCTN1Q14203 1278 aa18.29■□□□□ 0.52
GGA1-206ENST00000406772 RBM25P49756 843 aaKnown RBP18.28■□□□□ 0.52
GGA1-206ENST00000406772 RTEL1-TNFRSF6BF6WH68 1400 aa18.28■□□□□ 0.52
GGA1-206ENST00000406772 IQGAP1P46940 1657 aa18.27■□□□□ 0.52
GGA1-206ENST00000406772 RNF17Q9BXT8 1623 aaKnown RBP18.27■□□□□ 0.52
GGA1-206ENST00000406772 PLCH2O75038 1416 aa18.27■□□□□ 0.52
GGA1-206ENST00000406772 CCDC173Q0VFZ6 552 aa18.27■□□□□ 0.51
GGA1-206ENST00000406772 BMP2KLQ5H9B9 411 aa18.27■□□□□ 0.51
GGA1-206ENST00000406772 DNTTIP2Q5QJE6 756 aaKnown RBP18.27■□□□□ 0.51
GGA1-206ENST00000406772 OTUD7AQ8TE49 926 aaPredicted RBP18.27■□□□□ 0.51
GGA1-206ENST00000406772 ZGPATQ8N5A5 531 aaKnown RBP18.26■□□□□ 0.51
GGA1-206ENST00000406772 MYOM1P52179 1685 aa18.26■□□□□ 0.51
GGA1-206ENST00000406772 CDC45O75419 566 aa18.26■□□□□ 0.51
GGA1-206ENST00000406772 PLCB2Q00722 1185 aa18.26■□□□□ 0.51
GGA1-206ENST00000406772 SNX21Q969T3 373 aa18.26■□□□□ 0.51
GGA1-206ENST00000406772 ZSCAN30Q86W11 494 aa18.25■□□□□ 0.51
GGA1-206ENST00000406772 KIF2CQ99661 725 aa18.25■□□□□ 0.51
GGA1-206ENST00000406772 CIZ1Q9ULV3 898 aaPredicted RBP18.25■□□□□ 0.51
GGA1-206ENST00000406772 FAM83GA6ND36 823 aa18.25■□□□□ 0.51
GGA1-206ENST00000406772 PHACTR3Q96KR7 559 aa18.24■□□□□ 0.51
GGA1-206ENST00000406772 VIRMAQ69YN4 1812 aaKnown RBP18.24■□□□□ 0.51
GGA1-206ENST00000406772 C14orf93Q9H972 538 aaKnown RBP18.24■□□□□ 0.51
GGA1-206ENST00000406772 STAG3Q9UJ98 1225 aa18.24■□□□□ 0.51
GGA1-206ENST00000406772 AK9Q5TCS8 1911 aa18.24■□□□□ 0.51
GGA1-206ENST00000406772 ZNF518AQ6AHZ1 1483 aa18.23■□□□□ 0.51
GGA1-206ENST00000406772 SYCE3A1L190 88 aa18.23■□□□□ 0.51
GGA1-206ENST00000406772 FYB1O15117 783 aa18.23■□□□□ 0.51
GGA1-206ENST00000406772 TSHZ3Q63HK5 1081 aa18.23■□□□□ 0.51
GGA1-206ENST00000406772 PRAM1Q96QH2 718 aa18.23■□□□□ 0.51
GGA1-206ENST00000406772 PRIM1P49642 420 aaKnown RBP18.22■□□□□ 0.51
GGA1-206ENST00000406772 SLC4A10Q6U841 1118 aa18.22■□□□□ 0.51
GGA1-206ENST00000406772 TERF2IPQ9NYB0 399 aa18.22■□□□□ 0.51
GGA1-206ENST00000406772 CABP1Q9NZU7 370 aa18.22■□□□□ 0.51
GGA1-206ENST00000406772 PLEKHF1Q96S99 279 aa18.22■□□□□ 0.51
GGA1-206ENST00000406772 CD109Q6YHK3 1445 aa18.22■□□□□ 0.51
GGA1-206ENST00000406772 TRPM2O94759 1503 aa18.22■□□□□ 0.51
GGA1-206ENST00000406772 CEP152O94986 1710 aa18.21■□□□□ 0.51
GGA1-206ENST00000406772 KRT24Q2M2I5 525 aa18.21■□□□□ 0.51
GGA1-206ENST00000406772 ZSCAN23Q3MJ62 389 aa18.21■□□□□ 0.51
GGA1-206ENST00000406772 RBSNQ9H1K0 784 aa18.21■□□□□ 0.51
GGA1-206ENST00000406772 CT47B1P0C2W7 299 aaPredicted RBP18.21■□□□□ 0.51
GGA1-206ENST00000406772 TWISTNBQ3B726 338 aaPredicted RBP18.21■□□□□ 0.51
GGA1-206ENST00000406772 ZBTB7BO15156 539 aaPredicted RBP18.21■□□□□ 0.51
GGA1-206ENST00000406772 HDGFL2Q7Z4V5 671 aaPredicted RBP18.2■□□□□ 0.5
GGA1-206ENST00000406772 SIRT2Q8IXJ6 389 aa18.2■□□□□ 0.5
GGA1-206ENST00000406772 GCC1Q96CN9 775 aa18.2■□□□□ 0.5
GGA1-206ENST00000406772 TPM2P07951 284 aa18.2■□□□□ 0.5
GGA1-206ENST00000406772 ISY1Q9ULR0 285 aaKnown RBP18.2■□□□□ 0.5
GGA1-206ENST00000406772 A0A1W2PP64 1363 aa18.19■□□□□ 0.5
GGA1-206ENST00000406772 GSPT1P15170 499 aaKnown RBP18.19■□□□□ 0.5
GGA1-206ENST00000406772 KLHL40Q2TBA0 621 aa18.19■□□□□ 0.5
GGA1-206ENST00000406772 DTNBO60941 627 aa18.19■□□□□ 0.5
GGA1-206ENST00000406772 GDPD2Q9HCC8 539 aa18.19■□□□□ 0.5
GGA1-206ENST00000406772 EMILIN1Q9Y6C2 1016 aa18.19■□□□□ 0.5
GGA1-206ENST00000406772 PRDM10Q9NQV6 1147 aa18.18■□□□□ 0.5
GGA1-206ENST00000406772 DDIT3P35638 169 aa18.18■□□□□ 0.5
GGA1-206ENST00000406772 C8orf58Q8NAV2 365 aa18.18■□□□□ 0.5
GGA1-206ENST00000406772 IQSEC2Q5JU85 1478 aa18.18■□□□□ 0.5
GGA1-206ENST00000406772 PLXNC1O60486 1568 aa18.18■□□□□ 0.5
GGA1-206ENST00000406772 PPIP5K1Q6PFW1 1433 aa18.17■□□□□ 0.5
GGA1-206ENST00000406772 UQCRHLA0A096LP55 91 aa18.17■□□□□ 0.5
GGA1-206ENST00000406772 UQCRHP07919 91 aa18.17■□□□□ 0.5
GGA1-206ENST00000406772 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.17■□□□□ 0.5
GGA1-206ENST00000406772 PTMSP20962 102 aa18.17■□□□□ 0.5
GGA1-206ENST00000406772 CASC1Q6TDU7 716 aa18.17■□□□□ 0.5
GGA1-206ENST00000406772 MBIPQ9NS73 344 aa18.17■□□□□ 0.5
GGA1-206ENST00000406772 ABCA6Q8N139 1617 aa18.17■□□□□ 0.5
GGA1-206ENST00000406772 ST18O60284 1047 aa18.16■□□□□ 0.5
GGA1-206ENST00000406772 VAMP4O75379 141 aa18.16■□□□□ 0.5
GGA1-206ENST00000406772 SPHKAPQ2M3C7 1700 aa18.16■□□□□ 0.5
GGA1-206ENST00000406772 NUTM2FA1L443 756 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms