RNA–Protein interactions for RNA: ENST00000406310.5

ESRRA-203, Transcript of estrogen related receptor alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ESRRA, Length 2,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRA-203ENST00000406310 QRICH2Q9H0J4 1663 aa29.75■■■□□ 2.35
ESRRA-203ENST00000406310 ZSCAN30Q86W11 494 aa29.75■■■□□ 2.35
ESRRA-203ENST00000406310 ARAP3Q8WWN8 1544 aa29.75■■■□□ 2.35
ESRRA-203ENST00000406310 BMP2KLQ5H9B9 411 aa29.75■■■□□ 2.35
ESRRA-203ENST00000406310 IL16Q14005 1332 aa29.74■■■□□ 2.35
ESRRA-203ENST00000406310 IPO8O15397 1037 aaKnown RBP29.74■■■□□ 2.35
ESRRA-203ENST00000406310 ADGRF5Q8IZF2 1346 aa29.74■■■□□ 2.35
ESRRA-203ENST00000406310 REREQ9P2R6 1566 aa29.73■■■□□ 2.35
ESRRA-203ENST00000406310 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.72■■■□□ 2.35
ESRRA-203ENST00000406310 ZBTB40Q9NUA8 1239 aa29.72■■■□□ 2.35
ESRRA-203ENST00000406310 TNNT2P45379 298 aaPredicted RBP29.72■■■□□ 2.35
ESRRA-203ENST00000406310 NASPP49321 788 aaPredicted RBP29.72■■■□□ 2.35
ESRRA-203ENST00000406310 PUS7Q96PZ0 661 aaKnown RBP29.72■■■□□ 2.35
ESRRA-203ENST00000406310 ARHGAP31Q2M1Z3 1444 aa29.71■■■□□ 2.35
ESRRA-203ENST00000406310 K7ELQ4 463 aaPredicted RBP29.71■■■□□ 2.35
ESRRA-203ENST00000406310 HS1BP3Q53T59 392 aa29.71■■■□□ 2.35
ESRRA-203ENST00000406310 U2AF1L5P0DN76 240 aaPredicted RBP29.7■■■□□ 2.35
ESRRA-203ENST00000406310 U2AF1Q01081 240 aaKnown RBP eCLIP29.7■■■□□ 2.35
ESRRA-203ENST00000406310 CHMP4BQ9H444 224 aaKnown RBP29.7■■■□□ 2.35
ESRRA-203ENST00000406310 KLHL40Q2TBA0 621 aa29.69■■■□□ 2.34
ESRRA-203ENST00000406310 OFD1O75665 1012 aa29.69■■■□□ 2.34
ESRRA-203ENST00000406310 KIAA1211Q6ZU35 1233 aa29.69■■■□□ 2.34
ESRRA-203ENST00000406310 NOS1P29475 1434 aa29.69■■■□□ 2.34
ESRRA-203ENST00000406310 MSNP26038 577 aaKnown RBP29.68■■■□□ 2.34
ESRRA-203ENST00000406310 EXOSC9Q06265 439 aaKnown RBP29.68■■■□□ 2.34
ESRRA-203ENST00000406310 CHD1LQ86WJ1 897 aa29.68■■■□□ 2.34
ESRRA-203ENST00000406310 SSH1Q8WYL5 1049 aa29.68■■■□□ 2.34
ESRRA-203ENST00000406310 MAP7D2Q96T17 732 aa29.65■■■□□ 2.34
ESRRA-203ENST00000406310 SLC12A5Q9H2X9 1139 aa29.65■■■□□ 2.34
ESRRA-203ENST00000406310 CFAP44Q96MT7 982 aa29.65■■■□□ 2.34
ESRRA-203ENST00000406310 NOB1Q9ULX3 412 aaKnown RBP29.65■■■□□ 2.34
ESRRA-203ENST00000406310 MROH2AA6NES4 1674 aa29.65■■■□□ 2.34
ESRRA-203ENST00000406310 TMEM57Q8N5G2 664 aa29.64■■■□□ 2.34
ESRRA-203ENST00000406310 TSR2Q969E8 191 aaKnown RBP29.64■■■□□ 2.33
ESRRA-203ENST00000406310 GCC1Q96CN9 775 aa29.64■■■□□ 2.33
ESRRA-203ENST00000406310 KIF2CQ99661 725 aa29.64■■■□□ 2.33
ESRRA-203ENST00000406310 ALDH1L2Q3SY69 923 aa29.63■■■□□ 2.33
ESRRA-203ENST00000406310 FANCAO15360 1455 aa29.63■■■□□ 2.33
ESRRA-203ENST00000406310 EFCAB6Q5THR3 1501 aa29.63■■■□□ 2.33
ESRRA-203ENST00000406310 ATP7AQ04656 1500 aa29.62■■■□□ 2.33
ESRRA-203ENST00000406310 ANKRD36BQ8N2N9 1353 aa29.62■■■□□ 2.33
ESRRA-203ENST00000406310 ZNF445P59923 1031 aa29.61■■■□□ 2.33
ESRRA-203ENST00000406310 LNPKQ9C0E8 428 aa29.61■■■□□ 2.33
ESRRA-203ENST00000406310 ADGRB3O60242 1522 aa29.6■■■□□ 2.33
ESRRA-203ENST00000406310 ZNF428Q96B54 188 aa29.6■■■□□ 2.33
ESRRA-203ENST00000406310 DDX49Q9Y6V7 483 aaKnown RBP29.6■■■□□ 2.33
ESRRA-203ENST00000406310 UGGT1Q9NYU2 1555 aa29.6■■■□□ 2.33
ESRRA-203ENST00000406310 ZCCHC11Q5TAX3 1644 aaKnown RBP29.6■■■□□ 2.33
ESRRA-203ENST00000406310 TMPOP42166 694 aaKnown RBP29.6■■■□□ 2.33
ESRRA-203ENST00000406310 MED14O60244 1454 aa29.59■■■□□ 2.33
ESRRA-203ENST00000406310 MROH1Q8NDA8 1641 aa29.58■■■□□ 2.33
ESRRA-203ENST00000406310 PLEKHF1Q96S99 279 aa29.57■■■□□ 2.32
ESRRA-203ENST00000406310 CD109Q6YHK3 1445 aa29.57■■■□□ 2.32
ESRRA-203ENST00000406310 PPRC1Q5VV67 1664 aaKnown RBP29.57■■■□□ 2.32
ESRRA-203ENST00000406310 ADGRB1O14514 1584 aa29.56■■■□□ 2.32
ESRRA-203ENST00000406310 BAG4O95429 457 aaKnown RBP29.56■■■□□ 2.32
ESRRA-203ENST00000406310 BRPF1P55201 1214 aaPredicted RBP29.56■■■□□ 2.32
ESRRA-203ENST00000406310 NUCB2P80303 420 aa29.56■■■□□ 2.32
ESRRA-203ENST00000406310 PPLO60437 1756 aa29.56■■■□□ 2.32
ESRRA-203ENST00000406310 TRIM35Q9UPQ4 493 aa29.55■■■□□ 2.32
ESRRA-203ENST00000406310 SSFA2P28290 1259 aa29.55■■■□□ 2.32
ESRRA-203ENST00000406310 CALD1Q05682 793 aaKnown RBP29.55■■■□□ 2.32
ESRRA-203ENST00000406310 C14orf93Q9H972 538 aaKnown RBP29.55■■■□□ 2.32
ESRRA-203ENST00000406310 UHRF1BP1LA0JNW5 1464 aa29.54■■■□□ 2.32
ESRRA-203ENST00000406310 LMTK2Q8IWU2 1503 aa29.53■■■□□ 2.32
ESRRA-203ENST00000406310 TRAK1Q9UPV9 953 aa29.53■■■□□ 2.32
ESRRA-203ENST00000406310 TBC1D9Q6ZT07 1266 aa29.52■■■□□ 2.32
ESRRA-203ENST00000406310 AFAP1Q8N556 730 aa29.52■■■□□ 2.32
ESRRA-203ENST00000406310 ZNF500O60304 480 aaPredicted RBP29.52■■■□□ 2.32
ESRRA-203ENST00000406310 EVC2Q86UK5 1308 aa29.52■■■□□ 2.32
ESRRA-203ENST00000406310 KIF3BO15066 747 aa29.51■■■□□ 2.31
ESRRA-203ENST00000406310 MTERF4Q7Z6M4 381 aaKnown RBP29.51■■■□□ 2.31
ESRRA-203ENST00000406310 NOL7Q9UMY1 257 aaKnown RBP29.51■■■□□ 2.31
ESRRA-203ENST00000406310 RABEP1Q15276 862 aa29.51■■■□□ 2.31
ESRRA-203ENST00000406310 CD2BP2O95400 341 aaKnown RBP29.5■■■□□ 2.31
ESRRA-203ENST00000406310 GAS2L2Q8NHY3 880 aa29.5■■■□□ 2.31
ESRRA-203ENST00000406310 COL3A1P02461 1466 aaPredicted RBP29.5■■■□□ 2.31
ESRRA-203ENST00000406310 CDC45O75419 566 aa29.49■■■□□ 2.31
ESRRA-203ENST00000406310 MCM5P33992 734 aa29.49■■■□□ 2.31
ESRRA-203ENST00000406310 ANKRD45Q5TZF3 282 aa29.49■■■□□ 2.31
ESRRA-203ENST00000406310 CSPP1Q1MSJ5 1256 aa29.48■■■□□ 2.31
ESRRA-203ENST00000406310 ARHGAP45Q92619 1136 aa29.47■■■□□ 2.31
ESRRA-203ENST00000406310 PDLIM2Q96JY6 352 aa29.47■■■□□ 2.31
ESRRA-203ENST00000406310 ANKRD26Q9UPS8 1709 aa29.47■■■□□ 2.31
ESRRA-203ENST00000406310 PPIP5K1Q6PFW1 1433 aa29.47■■■□□ 2.31
ESRRA-203ENST00000406310 FOXD4L1Q9NU39 408 aa29.47■■■□□ 2.31
ESRRA-203ENST00000406310 PIK3R4Q99570 1358 aa29.46■■■□□ 2.31
ESRRA-203ENST00000406310 CWC22Q9HCG8 908 aaKnown RBP29.46■■■□□ 2.31
ESRRA-203ENST00000406310 RPGRIP1LQ68CZ1 1315 aa29.46■■■□□ 2.31
ESRRA-203ENST00000406310 U2SURPO15042 1029 aaKnown RBP29.45■■■□□ 2.31
ESRRA-203ENST00000406310 RIPK4P57078 832 aa29.43■■■□□ 2.3
ESRRA-203ENST00000406310 ZSCAN23Q3MJ62 389 aa29.43■■■□□ 2.3
ESRRA-203ENST00000406310 TULP4Q9NRJ4 1543 aa29.43■■■□□ 2.3
ESRRA-203ENST00000406310 ZBTB7BO15156 539 aaPredicted RBP29.43■■■□□ 2.3
ESRRA-203ENST00000406310 PTCH1Q13635 1447 aa29.42■■■□□ 2.3
ESRRA-203ENST00000406310 ARHGEF28Q8N1W1 1705 aaKnown RBP29.42■■■□□ 2.3
ESRRA-203ENST00000406310 ABCA9Q8IUA7 1624 aa29.42■■■□□ 2.3
ESRRA-203ENST00000406310 CYP2E1P05181 493 aaPredicted RBP29.41■■■□□ 2.3
ESRRA-203ENST00000406310 GLI2P10070 1586 aa29.41■■■□□ 2.3
ESRRA-203ENST00000406310 MCTP1Q6DN14 999 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms