RNA–Protein interactions for RNA: ENST00000404724.7

CDC45-202, Transcript of cell division cycle 45, humanhuman

TSL 2 BASIC

Gene CDC45, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC45-202ENST00000404724 ITSN1Q15811 1721 aa19.77■□□□□ 0.76
CDC45-202ENST00000404724 PAK3O75914 559 aaPredicted RBP19.77■□□□□ 0.76
CDC45-202ENST00000404724 HRCP23327 699 aa19.77■□□□□ 0.76
CDC45-202ENST00000404724 NGDNQ8NEJ9 315 aaKnown RBP19.77■□□□□ 0.76
CDC45-202ENST00000404724 FAM98CQ17RN3 349 aaKnown RBP19.76■□□□□ 0.75
CDC45-202ENST00000404724 FAM182BQ5T319 152 aa19.76■□□□□ 0.75
CDC45-202ENST00000404724 NUDT16Q96DE0 195 aaKnown RBP19.76■□□□□ 0.75
CDC45-202ENST00000404724 NUTM2GQ5VZR2 741 aa19.75■□□□□ 0.75
CDC45-202ENST00000404724 PHRF1Q9P1Y6 1649 aaKnown RBP19.75■□□□□ 0.75
CDC45-202ENST00000404724 CCDC125Q86Z20 511 aa19.74■□□□□ 0.75
CDC45-202ENST00000404724 CDK19Q9BWU1 502 aa19.74■□□□□ 0.75
CDC45-202ENST00000404724 PCGF6Q9BYE7 350 aa19.74■□□□□ 0.75
CDC45-202ENST00000404724 ZRANB1Q9UGI0 708 aa19.74■□□□□ 0.75
CDC45-202ENST00000404724 EIF3AQ14152 1382 aaKnown RBP19.74■□□□□ 0.75
CDC45-202ENST00000404724 KRT27Q7Z3Y8 459 aa19.73■□□□□ 0.75
CDC45-202ENST00000404724 KIAA1210Q9ULL0 1709 aa19.73■□□□□ 0.75
CDC45-202ENST00000404724 CHRNA2Q15822 529 aa19.72■□□□□ 0.75
CDC45-202ENST00000404724 A0A0G2JS52 829 aa19.71■□□□□ 0.75
CDC45-202ENST00000404724 MYT1Q01538 1121 aa19.71■□□□□ 0.75
CDC45-202ENST00000404724 KIAA0232Q92628 1395 aa19.71■□□□□ 0.75
CDC45-202ENST00000404724 THSD7AQ9UPZ6 1657 aa19.71■□□□□ 0.75
CDC45-202ENST00000404724 STAC3Q96MF2 364 aa19.7■□□□□ 0.74
CDC45-202ENST00000404724 ACEP12821 1306 aa19.7■□□□□ 0.74
CDC45-202ENST00000404724 SPATA31A5Q5VU36 1347 aa19.7■□□□□ 0.74
CDC45-202ENST00000404724 SPATA31A7Q8IWB4 1347 aa19.7■□□□□ 0.74
CDC45-202ENST00000404724 POLR3AO14802 1390 aaPredicted RBP19.69■□□□□ 0.74
CDC45-202ENST00000404724 PRDM11Q9NQV5 511 aa19.68■□□□□ 0.74
CDC45-202ENST00000404724 ZC3H6P61129 1189 aaKnown RBP19.68■□□□□ 0.74
CDC45-202ENST00000404724 NRKQ7Z2Y5 1582 aa19.67■□□□□ 0.74
CDC45-202ENST00000404724 NBPF8Q3BBV2 869 aa19.66■□□□□ 0.74
CDC45-202ENST00000404724 QRICH2Q9H0J4 1663 aa19.65■□□□□ 0.74
CDC45-202ENST00000404724 TNS1Q9HBL0 1735 aaKnown RBP19.64■□□□□ 0.73
CDC45-202ENST00000404724 CABP2Q9NPB3 220 aa19.64■□□□□ 0.73
CDC45-202ENST00000404724 STRN4Q9NRL3 753 aa19.64■□□□□ 0.73
CDC45-202ENST00000404724 CCDC61Q9Y6R9 512 aa19.63■□□□□ 0.73
CDC45-202ENST00000404724 CAMTA1Q9Y6Y1 1673 aa19.63■□□□□ 0.73
CDC45-202ENST00000404724 SPATA31A1Q5TZJ5 1347 aa19.63■□□□□ 0.73
CDC45-202ENST00000404724 PLEKHG3A1L390 1219 aa19.62■□□□□ 0.73
CDC45-202ENST00000404724 LMO7Q8WWI1 1683 aa19.62■□□□□ 0.73
CDC45-202ENST00000404724 PSDA5PKW4 1024 aaPredicted RBP19.62■□□□□ 0.73
CDC45-202ENST00000404724 PPIP5K1Q6PFW1 1433 aa19.61■□□□□ 0.73
CDC45-202ENST00000404724 SF3B2Q13435 895 aaKnown RBP19.61■□□□□ 0.73
CDC45-202ENST00000404724 SIN3AQ96ST3 1273 aa19.61■□□□□ 0.73
CDC45-202ENST00000404724 USP35Q9P2H5 1018 aa19.61■□□□□ 0.73
CDC45-202ENST00000404724 RGPD1P0DJD0 1748 aa19.61■□□□□ 0.73
CDC45-202ENST00000404724 EN1Q05925 392 aaPredicted RBP19.6■□□□□ 0.73
CDC45-202ENST00000404724 L3MBTL2Q969R5 705 aa19.6■□□□□ 0.73
CDC45-202ENST00000404724 CENPJQ9HC77 1338 aaPredicted RBP19.59■□□□□ 0.73
CDC45-202ENST00000404724 SRPK2P78362 688 aaKnown RBP19.59■□□□□ 0.73
CDC45-202ENST00000404724 ABTB2Q8N961 1025 aa19.59■□□□□ 0.73
CDC45-202ENST00000404724 USP19O94966 1318 aa19.59■□□□□ 0.73
CDC45-202ENST00000404724 TRPM1Q7Z4N2 1603 aa19.58■□□□□ 0.73
CDC45-202ENST00000404724 SSH2Q76I76 1423 aa19.58■□□□□ 0.73
CDC45-202ENST00000404724 LARP1Q6PKG0 1096 aaKnown RBP19.58■□□□□ 0.72
CDC45-202ENST00000404724 PIK3C2AO00443 1686 aa19.55■□□□□ 0.72
CDC45-202ENST00000404724 BAG6P46379 1132 aa19.55■□□□□ 0.72
CDC45-202ENST00000404724 CABP1Q9NZU7 370 aa19.55■□□□□ 0.72
CDC45-202ENST00000404724 TRIM37O94972 964 aa19.54■□□□□ 0.72
CDC45-202ENST00000404724 LRP5O75197 1615 aa19.54■□□□□ 0.72
CDC45-202ENST00000404724 GCP02774 474 aa19.53■□□□□ 0.72
CDC45-202ENST00000404724 CPDO75976 1380 aa19.53■□□□□ 0.72
CDC45-202ENST00000404724 USP6P35125 1406 aa19.53■□□□□ 0.72
CDC45-202ENST00000404724 EZH2Q15910 746 aaKnown RBP19.52■□□□□ 0.72
CDC45-202ENST00000404724 COL5A2P05997 1499 aaPredicted RBP19.52■□□□□ 0.71
CDC45-202ENST00000404724 DISP2A7MBM2 1401 aa19.51■□□□□ 0.71
CDC45-202ENST00000404724 NEUROD1Q13562 356 aa19.51■□□□□ 0.71
CDC45-202ENST00000404724 EVA1CP58658 441 aa19.5■□□□□ 0.71
CDC45-202ENST00000404724 ZBTB7CA1YPR0 619 aa19.49■□□□□ 0.71
CDC45-202ENST00000404724 R3HDM1Q15032 1099 aaKnown RBP19.49■□□□□ 0.71
CDC45-202ENST00000404724 SLIT3O75094 1523 aa19.49■□□□□ 0.71
CDC45-202ENST00000404724 COL18A1P39060 1754 aa19.49■□□□□ 0.71
CDC45-202ENST00000404724 BARGINQ6ZT62 677 aa19.49■□□□□ 0.71
CDC45-202ENST00000404724 CAMKK2Q96RR4 588 aa19.49■□□□□ 0.71
CDC45-202ENST00000404724 NLRP13Q86W25 1043 aa19.48■□□□□ 0.71
CDC45-202ENST00000404724 RGPD5Q99666 1765 aa19.48■□□□□ 0.71
CDC45-202ENST00000404724 TCP11L2Q8N4U5 519 aa19.47■□□□□ 0.71
CDC45-202ENST00000404724 AKAP12Q02952 1782 aa19.47■□□□□ 0.71
CDC45-202ENST00000404724 PARP4Q9UKK3 1724 aaKnown RBP19.47■□□□□ 0.71
CDC45-202ENST00000404724 NLRP6P59044 892 aa19.46■□□□□ 0.71
CDC45-202ENST00000404724 RREB1Q92766 1687 aa19.46■□□□□ 0.71
CDC45-202ENST00000404724 UTRNP46939 3433 aa19.46■□□□□ 0.71
CDC45-202ENST00000404724 ROCK2O75116 1388 aaKnown RBP19.46■□□□□ 0.71
CDC45-202ENST00000404724 FAM196AQ6ZSG2 479 aa19.46■□□□□ 0.71
CDC45-202ENST00000404724 AXIN2Q9Y2T1 843 aa19.46■□□□□ 0.71
CDC45-202ENST00000404724 NUP188Q5SRE5 1749 aa19.46■□□□□ 0.71
CDC45-202ENST00000404724 LRRC37A3O60309 1634 aa19.45■□□□□ 0.7
CDC45-202ENST00000404724 PEAK1Q9H792 1746 aa19.44■□□□□ 0.7
CDC45-202ENST00000404724 APBA3O96018 575 aa19.44■□□□□ 0.7
CDC45-202ENST00000404724 SOX12O15370 315 aa19.43■□□□□ 0.7
CDC45-202ENST00000404724 PDE3BQ13370 1112 aa19.43■□□□□ 0.7
CDC45-202ENST00000404724 PTF1AQ7RTS3 328 aa19.43■□□□□ 0.7
CDC45-202ENST00000404724 EVC2Q86UK5 1308 aa19.43■□□□□ 0.7
CDC45-202ENST00000404724 CRB1P82279 1406 aa19.42■□□□□ 0.7
CDC45-202ENST00000404724 WNK3Q9BYP7 1800 aa19.42■□□□□ 0.7
CDC45-202ENST00000404724 AATKQ6ZMQ8 1374 aa19.42■□□□□ 0.7
CDC45-202ENST00000404724 SBF2Q86WG5 1849 aa19.41■□□□□ 0.7
CDC45-202ENST00000404724 TTC21BQ7Z4L5 1316 aa19.4■□□□□ 0.7
CDC45-202ENST00000404724 CPSF1Q10570 1443 aaKnown RBP19.4■□□□□ 0.7
CDC45-202ENST00000404724 NFAT5O94916 1531 aa19.39■□□□□ 0.69
CDC45-202ENST00000404724 BRD4O60885 1362 aaPredicted RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms