RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 ABCA9Q8IUA7 1624 aa15.1■□□□□ 0.01
RBM39-206ENST00000403542 MCM4P33991 863 aa15.1■□□□□ 0.01
RBM39-206ENST00000403542 TULP4Q9NRJ4 1543 aa15.1■□□□□ 0.01
RBM39-206ENST00000403542 WAPLQ7Z5K2 1190 aa15.1■□□□□ 0.01
RBM39-206ENST00000403542 TSPYL6Q8N831 410 aa15.1■□□□□ 0.01
RBM39-206ENST00000403542 PHACTR3Q96KR7 559 aa15.1■□□□□ 0.01
RBM39-206ENST00000403542 HSCBQ8IWL3 235 aa15.09■□□□□ 0.01
RBM39-206ENST00000403542 RRAGDQ9NQL2 400 aaPredicted RBP15.09■□□□□ 0.01
RBM39-206ENST00000403542 ZBTB40Q9NUA8 1239 aa15.09■□□□□ 0.01
RBM39-206ENST00000403542 CDK19Q9BWU1 502 aa15.08■□□□□ 0.01
RBM39-206ENST00000403542 TERF2IPQ9NYB0 399 aa15.08■□□□□ 0.01
RBM39-206ENST00000403542 XRCC6P12956 609 aaKnown RBP eCLIP15.08■□□□□ 03e-9■■□□□ 12.4
RBM39-206ENST00000403542 ZRANB1Q9UGI0 708 aa15.08■□□□□ 0
RBM39-206ENST00000403542 RBM42Q9BTD8 480 aaKnown RBP15.07■□□□□ 0
RBM39-206ENST00000403542 APBB1O00213 710 aa15.07■□□□□ 0
RBM39-206ENST00000403542 TRAK2O60296 914 aa15.07■□□□□ 0
RBM39-206ENST00000403542 HSP90AA1P07900 732 aaKnown RBP15.07■□□□□ 0
RBM39-206ENST00000403542 ARAP3Q8WWN8 1544 aa15.07■□□□□ 0
RBM39-206ENST00000403542 GOLGA6L3A6NEY3 463 aa15.07■□□□□ 0
RBM39-206ENST00000403542 HDAC1Q13547 482 aaPredicted RBP15.07■□□□□ 0
RBM39-206ENST00000403542 AAMPQ13685 434 aa15.07■□□□□ 0
RBM39-206ENST00000403542 IFT172Q9UG01 1749 aa15.06■□□□□ 0
RBM39-206ENST00000403542 DCTN1Q14203 1278 aa15.06■□□□□ 0
RBM39-206ENST00000403542 EMILIN1Q9Y6C2 1016 aa15.06■□□□□ 0
RBM39-206ENST00000403542 RPGRIP1LQ68CZ1 1315 aa15.06■□□□□ 0
RBM39-206ENST00000403542 ATAD2Q6PL18 1390 aa15.06■□□□□ 0
RBM39-206ENST00000403542 CHMP5Q9NZZ3 219 aa15.06■□□□□ 0
RBM39-206ENST00000403542 GLI2P10070 1586 aa15.05■□□□□ 0
RBM39-206ENST00000403542 FAM83GA6ND36 823 aa15.05■□□□□ 0
RBM39-206ENST00000403542 HDGFL2Q7Z4V5 671 aaPredicted RBP15.05■□□□□ 0
RBM39-206ENST00000403542 SMC5Q8IY18 1101 aa15.05■□□□□ 0
RBM39-206ENST00000403542 NCKAP5LQ9HCH0 1330 aa15.05■□□□□ 0
RBM39-206ENST00000403542 VIRMAQ69YN4 1812 aaKnown RBP15.05■□□□□ -0
RBM39-206ENST00000403542 HSP90AB1P08238 724 aaKnown RBP15.05■□□□□ -0
RBM39-206ENST00000403542 CHD1LQ86WJ1 897 aa15.05■□□□□ -0
RBM39-206ENST00000403542 IPO8O15397 1037 aaKnown RBP15.04■□□□□ -0
RBM39-206ENST00000403542 CD2BP2O95400 341 aaKnown RBP15.04■□□□□ -0
RBM39-206ENST00000403542 ABCC11Q96J66 1382 aa15.04■□□□□ -0
RBM39-206ENST00000403542 MYO3AQ8NEV4 1616 aa15.04■□□□□ -0
RBM39-206ENST00000403542 FAM43AQ8N2R8 423 aa15.04■□□□□ -0
RBM39-206ENST00000403542 MLECQ14165 292 aa15.03■□□□□ -0
RBM39-206ENST00000403542 SETBP1Q9Y6X0 1596 aa15.03■□□□□ -0
RBM39-206ENST00000403542 NUCB1Q02818 461 aa15.03■□□□□ -0
RBM39-206ENST00000403542 SOX12O15370 315 aa15.03■□□□□ -0
RBM39-206ENST00000403542 RRS1Q15050 365 aaKnown RBP15.03■□□□□ -0
RBM39-206ENST00000403542 L1TD1Q5T7N2 865 aaKnown RBP15.03■□□□□ -0
RBM39-206ENST00000403542 KIF16BQ96L93 1317 aa15.02■□□□□ -0
RBM39-206ENST00000403542 POLKQ9UBT6 870 aa15.02■□□□□ -0
RBM39-206ENST00000403542 PPLO60437 1756 aa15.02□□□□□ -0.01
RBM39-206ENST00000403542 FRMPD1Q5SYB0 1578 aa15.02□□□□□ -0.01
RBM39-206ENST00000403542 POGZQ7Z3K3 1410 aa15.01□□□□□ -0.01
RBM39-206ENST00000403542 NUTM2FA1L443 756 aa15.01□□□□□ -0.01
RBM39-206ENST00000403542 NSD2O96028 1365 aa15.01□□□□□ -0.01
RBM39-206ENST00000403542 NME9Q86XW9 330 aa15.01□□□□□ -0.01
RBM39-206ENST00000403542 CAMSAP1Q5T5Y3 1602 aa15□□□□□ -0.01
RBM39-206ENST00000403542 CT47B1P0C2W7 299 aaPredicted RBP15□□□□□ -0.01
RBM39-206ENST00000403542 KRT24Q2M2I5 525 aa15□□□□□ -0.01
RBM39-206ENST00000403542 ABCC3O15438 1527 aa15□□□□□ -0.01
RBM39-206ENST00000403542 RSPH6AQ9H0K4 717 aa15□□□□□ -0.01
RBM39-206ENST00000403542 TNPO1Q92973 898 aaKnown RBP14.99□□□□□ -0.01
RBM39-206ENST00000403542 SIRT2Q8IXJ6 389 aa14.99□□□□□ -0.01
RBM39-206ENST00000403542 C8orf58Q8NAV2 365 aa14.99□□□□□ -0.01
RBM39-206ENST00000403542 MBIPQ9NS73 344 aa14.99□□□□□ -0.01
RBM39-206ENST00000403542 ZC3H13Q5T200 1668 aaKnown RBP14.99□□□□□ -0.01
RBM39-206ENST00000403542 ZBTB7BO15156 539 aaPredicted RBP14.99□□□□□ -0.01
RBM39-206ENST00000403542 VAMP4O75379 141 aa14.99□□□□□ -0.01
RBM39-206ENST00000403542 NEURL4Q96JN8 1562 aa14.98□□□□□ -0.01
RBM39-206ENST00000403542 LMTK2Q8IWU2 1503 aa14.98□□□□□ -0.01
RBM39-206ENST00000403542 TBC1D9Q6ZT07 1266 aa14.98□□□□□ -0.01
RBM39-206ENST00000403542 C16orf71Q8IYS4 520 aaPredicted RBP14.98□□□□□ -0.01
RBM39-206ENST00000403542 FCHSD2O94868 740 aa14.98□□□□□ -0.01
RBM39-206ENST00000403542 ZNF692Q9BU19 519 aaPredicted RBP14.97□□□□□ -0.01
RBM39-206ENST00000403542 SIGLEC1Q9BZZ2 1709 aa14.97□□□□□ -0.01
RBM39-206ENST00000403542 PPIP5K1Q6PFW1 1433 aa14.96□□□□□ -0.01
RBM39-206ENST00000403542 TWISTNBQ3B726 338 aaPredicted RBP14.96□□□□□ -0.01
RBM39-206ENST00000403542 MRPL50Q8N5N7 158 aaKnown RBP14.96□□□□□ -0.01
RBM39-206ENST00000403542 NEXMIFQ5QGS0 1516 aa14.96□□□□□ -0.01
RBM39-206ENST00000403542 ARHGEF28Q8N1W1 1705 aaKnown RBP14.96□□□□□ -0.01
RBM39-206ENST00000403542 YEATS2Q9ULM3 1422 aa14.96□□□□□ -0.01
RBM39-206ENST00000403542 COL3A1P02461 1466 aaPredicted RBP14.95□□□□□ -0.02
RBM39-206ENST00000403542 NFE2L2Q16236 605 aa14.95□□□□□ -0.02
RBM39-206ENST00000403542 NAP1L5Q96NT1 182 aaPredicted RBP14.95□□□□□ -0.02
RBM39-206ENST00000403542 YTHDC2Q9H6S0 1430 aaKnown RBP14.95□□□□□ -0.02
RBM39-206ENST00000403542 TXNDC2Q86VQ3 553 aa14.95□□□□□ -0.02
RBM39-206ENST00000403542 OTUD7AQ8TE49 926 aaPredicted RBP14.95□□□□□ -0.02
RBM39-206ENST00000403542 KIF2CQ99661 725 aa14.95□□□□□ -0.02
RBM39-206ENST00000403542 SLC52A1Q9NWF4 448 aa14.95□□□□□ -0.02
RBM39-206ENST00000403542 ADGRB2O60241 1585 aa14.95□□□□□ -0.02
RBM39-206ENST00000403542 IL16Q14005 1332 aa14.95□□□□□ -0.02
RBM39-206ENST00000403542 CD163L1Q9NR16 1453 aa14.95□□□□□ -0.02
RBM39-206ENST00000403542 ALDH1L2Q3SY69 923 aa14.94□□□□□ -0.02
RBM39-206ENST00000403542 GAS2L3Q86XJ1 694 aa14.94□□□□□ -0.02
RBM39-206ENST00000403542 PUS7Q96PZ0 661 aaKnown RBP14.94□□□□□ -0.02
RBM39-206ENST00000403542 FSD2A1L4K1 749 aa14.94□□□□□ -0.02
RBM39-206ENST00000403542 SMARCA5O60264 1052 aaPredicted RBP14.94□□□□□ -0.02
RBM39-206ENST00000403542 SSFA2P28290 1259 aa14.94□□□□□ -0.02
RBM39-206ENST00000403542 AEBP1Q8IUX7 1158 aa14.94□□□□□ -0.02
RBM39-206ENST00000403542 PNNQ9H307 717 aaKnown RBP14.94□□□□□ -0.02
RBM39-206ENST00000403542 RBM25P49756 843 aaKnown RBP14.93□□□□□ -0.02
RBM39-206ENST00000403542 GAS2L2Q8NHY3 880 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms