RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 NUTM2GQ5VZR2 741 aa23.88■■□□□ 1.41
PTCHD3P3-201ENST00000403073 NINLQ9Y2I6 1382 aa23.88■■□□□ 1.41
PTCHD3P3-201ENST00000403073 ABTB2Q8N961 1025 aa23.87■■□□□ 1.41
PTCHD3P3-201ENST00000403073 CABLES1Q8TDN4 633 aa23.87■■□□□ 1.41
PTCHD3P3-201ENST00000403073 ARHGEF10O15013 1369 aa23.87■■□□□ 1.41
PTCHD3P3-201ENST00000403073 TRPM3Q9HCF6 1732 aaPredicted RBP23.86■■□□□ 1.41
PTCHD3P3-201ENST00000403073 A0A1W2PP64 1363 aa23.86■■□□□ 1.41
PTCHD3P3-201ENST00000403073 KIF7Q2M1P5 1343 aa23.85■■□□□ 1.41
PTCHD3P3-201ENST00000403073 TTC21BQ7Z4L5 1316 aa23.85■■□□□ 1.41
PTCHD3P3-201ENST00000403073 SSH2Q76I76 1423 aa23.85■■□□□ 1.41
PTCHD3P3-201ENST00000403073 SHPRHQ149N8 1683 aa23.85■■□□□ 1.41
PTCHD3P3-201ENST00000403073 BRD4O60885 1362 aaPredicted RBP23.84■■□□□ 1.41
PTCHD3P3-201ENST00000403073 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.84■■□□□ 1.41
PTCHD3P3-201ENST00000403073 ANKRD36BQ8N2N9 1353 aa23.82■■□□□ 1.4
PTCHD3P3-201ENST00000403073 LRP6O75581 1613 aa23.82■■□□□ 1.4
PTCHD3P3-201ENST00000403073 ADAMTS2O95450 1211 aa23.82■■□□□ 1.4
PTCHD3P3-201ENST00000403073 HAP1P54257 671 aaPredicted RBP23.8■■□□□ 1.4
PTCHD3P3-201ENST00000403073 MEX3CQ5U5Q3 659 aaKnown RBP23.8■■□□□ 1.4
PTCHD3P3-201ENST00000403073 TTC21AQ8NDW8 1320 aa23.8■■□□□ 1.4
PTCHD3P3-201ENST00000403073 NLRP6P59044 892 aa23.79■■□□□ 1.4
PTCHD3P3-201ENST00000403073 CARD14Q9BXL6 1004 aa23.79■■□□□ 1.4
PTCHD3P3-201ENST00000403073 COL22A1Q8NFW1 1626 aaPredicted RBP23.79■■□□□ 1.4
PTCHD3P3-201ENST00000403073 WASHC2AQ641Q2 1341 aa23.79■■□□□ 1.4
PTCHD3P3-201ENST00000403073 NLRP13Q86W25 1043 aa23.78■■□□□ 1.4
PTCHD3P3-201ENST00000403073 NME9Q86XW9 330 aa23.78■■□□□ 1.4
PTCHD3P3-201ENST00000403073 ZRANB1Q9UGI0 708 aa23.78■■□□□ 1.4
PTCHD3P3-201ENST00000403073 ALS2Q96Q42 1657 aa23.78■■□□□ 1.4
PTCHD3P3-201ENST00000403073 EDC4Q6P2E9 1401 aaKnown RBP23.77■■□□□ 1.4
PTCHD3P3-201ENST00000403073 PANK3Q9H999 370 aa23.77■■□□□ 1.4
PTCHD3P3-201ENST00000403073 AKAP12Q02952 1782 aa23.77■■□□□ 1.4
PTCHD3P3-201ENST00000403073 MED1Q15648 1581 aaPredicted RBP23.77■■□□□ 1.4
PTCHD3P3-201ENST00000403073 CCDC7Q96M83 1385 aa23.77■■□□□ 1.4
PTCHD3P3-201ENST00000403073 C8orf37Q96NL8 207 aa23.75■■□□□ 1.39
PTCHD3P3-201ENST00000403073 MYOM1P52179 1685 aa23.73■■□□□ 1.39
PTCHD3P3-201ENST00000403073 NRKQ7Z2Y5 1582 aa23.73■■□□□ 1.39
PTCHD3P3-201ENST00000403073 MON2Q7Z3U7 1717 aa23.73■■□□□ 1.39
PTCHD3P3-201ENST00000403073 USP19O94966 1318 aa23.72■■□□□ 1.39
PTCHD3P3-201ENST00000403073 NGLY1Q96IV0 654 aa23.71■■□□□ 1.39
PTCHD3P3-201ENST00000403073 PHF23Q9BUL5 403 aaPredicted RBP23.71■■□□□ 1.39
PTCHD3P3-201ENST00000403073 NSD3Q9BZ95 1437 aa23.7■■□□□ 1.38
PTCHD3P3-201ENST00000403073 FYB1O15117 783 aa23.7■■□□□ 1.38
PTCHD3P3-201ENST00000403073 GCP02774 474 aa23.7■■□□□ 1.38
PTCHD3P3-201ENST00000403073 USP31Q70CQ4 1352 aa23.69■■□□□ 1.38
PTCHD3P3-201ENST00000403073 ZC3H6P61129 1189 aaKnown RBP23.69■■□□□ 1.38
PTCHD3P3-201ENST00000403073 PIK3C2AO00443 1686 aa23.69■■□□□ 1.38
PTCHD3P3-201ENST00000403073 FAM83GA6ND36 823 aa23.68■■□□□ 1.38
PTCHD3P3-201ENST00000403073 SOX12O15370 315 aa23.68■■□□□ 1.38
PTCHD3P3-201ENST00000403073 GGNBP2Q9H3C7 697 aa23.68■■□□□ 1.38
PTCHD3P3-201ENST00000403073 RGS17Q9UGC6 210 aaPredicted RBP23.68■■□□□ 1.38
PTCHD3P3-201ENST00000403073 AFF2P51816 1311 aa23.66■■□□□ 1.38
PTCHD3P3-201ENST00000403073 COG3Q96JB2 828 aa23.65■■□□□ 1.38
PTCHD3P3-201ENST00000403073 KIAA0232Q92628 1395 aa23.65■■□□□ 1.38
PTCHD3P3-201ENST00000403073 KCNH5Q8NCM2 988 aa23.64■■□□□ 1.37
PTCHD3P3-201ENST00000403073 PRDM11Q9NQV5 511 aa23.64■■□□□ 1.37
PTCHD3P3-201ENST00000403073 ZBTB7CA1YPR0 619 aa23.63■■□□□ 1.37
PTCHD3P3-201ENST00000403073 CHRNA2Q15822 529 aa23.63■■□□□ 1.37
PTCHD3P3-201ENST00000403073 FNBP4Q8N3X1 1017 aaPredicted RBP23.63■■□□□ 1.37
PTCHD3P3-201ENST00000403073 SLIT3O75094 1523 aa23.63■■□□□ 1.37
PTCHD3P3-201ENST00000403073 CGNL1Q0VF96 1302 aa23.62■■□□□ 1.37
PTCHD3P3-201ENST00000403073 ABCA3Q99758 1704 aa23.62■■□□□ 1.37
PTCHD3P3-201ENST00000403073 CRYBG1Q9Y4K1 1723 aa23.62■■□□□ 1.37
PTCHD3P3-201ENST00000403073 OVOS2A0A0J9YW53 1432 aa23.61■■□□□ 1.37
PTCHD3P3-201ENST00000403073 OVOS2Q6IE36 1432 aa23.61■■□□□ 1.37
PTCHD3P3-201ENST00000403073 USP21Q9UK80 565 aa23.61■■□□□ 1.37
PTCHD3P3-201ENST00000403073 KNSTRNQ9Y448 316 aa23.61■■□□□ 1.37
PTCHD3P3-201ENST00000403073 PHRF1Q9P1Y6 1649 aaKnown RBP23.6■■□□□ 1.37
PTCHD3P3-201ENST00000403073 PER1O15534 1290 aaPredicted RBP23.59■■□□□ 1.37
PTCHD3P3-201ENST00000403073 FBLN1P23142 703 aa23.59■■□□□ 1.37
PTCHD3P3-201ENST00000403073 ZNF772Q68DY9 489 aaPredicted RBP23.59■■□□□ 1.37
PTCHD3P3-201ENST00000403073 CPDO75976 1380 aa23.59■■□□□ 1.37
PTCHD3P3-201ENST00000403073 POTEAQ6S8J7 498 aa23.58■■□□□ 1.37
PTCHD3P3-201ENST00000403073 ARHGEF25Q86VW2 580 aa23.58■■□□□ 1.37
PTCHD3P3-201ENST00000403073 BTG4Q9NY30 223 aa23.58■■□□□ 1.37
PTCHD3P3-201ENST00000403073 MARF1Q9Y4F3 1742 aaKnown RBP23.57■■□□□ 1.36
PTCHD3P3-201ENST00000403073 BCL9LQ86UU0 1499 aa23.56■■□□□ 1.36
PTCHD3P3-201ENST00000403073 SLIT2O94813 1529 aa23.56■■□□□ 1.36
PTCHD3P3-201ENST00000403073 UNC5CLQ8IV45 518 aa23.56■■□□□ 1.36
PTCHD3P3-201ENST00000403073 QTRT2Q9H974 415 aaKnown RBP23.55■■□□□ 1.36
PTCHD3P3-201ENST00000403073 AMER1Q5JTC6 1135 aaPredicted RBP23.54■■□□□ 1.36
PTCHD3P3-201ENST00000403073 NFAT5O94916 1531 aa23.54■■□□□ 1.36
PTCHD3P3-201ENST00000403073 USP54Q70EL1 1684 aa23.52■■□□□ 1.36
PTCHD3P3-201ENST00000403073 DDX10Q13206 875 aaKnown RBP23.52■■□□□ 1.36
PTCHD3P3-201ENST00000403073 AXIN2Q9Y2T1 843 aa23.52■■□□□ 1.36
PTCHD3P3-201ENST00000403073 AATKQ6ZMQ8 1374 aa23.52■■□□□ 1.36
PTCHD3P3-201ENST00000403073 ZNF316A6NFI3 1004 aaPredicted RBP23.51■■□□□ 1.35
PTCHD3P3-201ENST00000403073 TNNT2P45379 298 aaPredicted RBP23.51■■□□□ 1.35
PTCHD3P3-201ENST00000403073 CNGB1Q14028 1251 aaPredicted RBP23.51■■□□□ 1.35
PTCHD3P3-201ENST00000403073 TRPC5Q9UL62 973 aaPredicted RBP23.51■■□□□ 1.35
PTCHD3P3-201ENST00000403073 COL14A1Q05707 1796 aaKnown RBP23.5■■□□□ 1.35
PTCHD3P3-201ENST00000403073 EVA1CP58658 441 aa23.5■■□□□ 1.35
PTCHD3P3-201ENST00000403073 RRS1Q15050 365 aaKnown RBP23.5■■□□□ 1.35
PTCHD3P3-201ENST00000403073 CC2D1BQ5T0F9 858 aaKnown RBP23.5■■□□□ 1.35
PTCHD3P3-201ENST00000403073 STRN4Q9NRL3 753 aa23.5■■□□□ 1.35
PTCHD3P3-201ENST00000403073 MORC1Q86VD1 984 aa23.49■■□□□ 1.35
PTCHD3P3-201ENST00000403073 MAP3K19Q56UN5 1328 aa23.49■■□□□ 1.35
PTCHD3P3-201ENST00000403073 NSD2O96028 1365 aa23.49■■□□□ 1.35
PTCHD3P3-201ENST00000403073 KIF20BQ96Q89 1820 aa23.48■■□□□ 1.35
PTCHD3P3-201ENST00000403073 CAMTA1Q9Y6Y1 1673 aa23.48■■□□□ 1.35
PTCHD3P3-201ENST00000403073 VPS72Q15906 364 aa23.47■■□□□ 1.35
PTCHD3P3-201ENST00000403073 CCDC9Q9Y3X0 531 aaKnown RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms