RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 NGLY1Q96IV0 654 aa26.99■■□□□ 1.91
RTN4-207ENST00000402434 ZNF692Q9BU19 519 aaPredicted RBP26.99■■□□□ 1.91
RTN4-207ENST00000402434 USP6P35125 1406 aa26.98■■□□□ 1.91
RTN4-207ENST00000402434 AFF2P51816 1311 aa26.98■■□□□ 1.91
RTN4-207ENST00000402434 CPSF1Q10570 1443 aaKnown RBP26.98■■□□□ 1.91
RTN4-207ENST00000402434 FNBP4Q8N3X1 1017 aaPredicted RBP26.97■■□□□ 1.91
RTN4-207ENST00000402434 SSH2Q76I76 1423 aa26.96■■□□□ 1.91
RTN4-207ENST00000402434 TMF1P82094 1093 aa26.95■■□□□ 1.91
RTN4-207ENST00000402434 HAP1P54257 671 aaPredicted RBP26.94■■□□□ 1.9
RTN4-207ENST00000402434 MARF1Q9Y4F3 1742 aaKnown RBP26.94■■□□□ 1.9
RTN4-207ENST00000402434 ABTB2Q8N961 1025 aa26.93■■□□□ 1.9
RTN4-207ENST00000402434 ABCA3Q99758 1704 aa26.93■■□□□ 1.9
RTN4-207ENST00000402434 PLEKHG5O94827 1062 aa26.93■■□□□ 1.9
RTN4-207ENST00000402434 SLC12A5Q9H2X9 1139 aa26.93■■□□□ 1.9
RTN4-207ENST00000402434 AKAP12Q02952 1782 aa26.91■■□□□ 1.9
RTN4-207ENST00000402434 EIF4G2P78344 907 aaKnown RBP eCLIP26.91■■□□□ 1.99e-7■■■■□ 19.9
RTN4-207ENST00000402434 TMC1Q8TDI8 760 aa26.91■■□□□ 1.9
RTN4-207ENST00000402434 CD163L1Q9NR16 1453 aa26.91■■□□□ 1.9
RTN4-207ENST00000402434 NINLQ9Y2I6 1382 aa26.9■■□□□ 1.9
RTN4-207ENST00000402434 CRYBG1Q9Y4K1 1723 aa26.9■■□□□ 1.9
RTN4-207ENST00000402434 NUTM2GQ5VZR2 741 aa26.89■■□□□ 1.9
RTN4-207ENST00000402434 USP21Q9UK80 565 aa26.89■■□□□ 1.9
RTN4-207ENST00000402434 KTN1Q86UP2 1357 aaKnown RBP26.88■■□□□ 1.89
RTN4-207ENST00000402434 CDCA8Q53HL2 280 aa26.88■■□□□ 1.89
RTN4-207ENST00000402434 TTC21BQ7Z4L5 1316 aa26.88■■□□□ 1.89
RTN4-207ENST00000402434 NLRP13Q86W25 1043 aa26.87■■□□□ 1.89
RTN4-207ENST00000402434 BCL9LQ86UU0 1499 aa26.87■■□□□ 1.89
RTN4-207ENST00000402434 USP19O94966 1318 aa26.87■■□□□ 1.89
RTN4-207ENST00000402434 QTRT2Q9H974 415 aaKnown RBP26.87■■□□□ 1.89
RTN4-207ENST00000402434 TERF2IPQ9NYB0 399 aa26.87■■□□□ 1.89
RTN4-207ENST00000402434 SLIT2O94813 1529 aa26.86■■□□□ 1.89
RTN4-207ENST00000402434 TTC21AQ8NDW8 1320 aa26.86■■□□□ 1.89
RTN4-207ENST00000402434 FAM83GA6ND36 823 aa26.86■■□□□ 1.89
RTN4-207ENST00000402434 HSPA5P11021 654 aaKnown RBP26.86■■□□□ 1.89
RTN4-207ENST00000402434 HDGFL2Q7Z4V5 671 aaPredicted RBP26.86■■□□□ 1.89
RTN4-207ENST00000402434 MON2Q7Z3U7 1717 aa26.84■■□□□ 1.89
RTN4-207ENST00000402434 NRKQ7Z2Y5 1582 aa26.83■■□□□ 1.89
RTN4-207ENST00000402434 A0A1W2PP64 1363 aa26.83■■□□□ 1.89
RTN4-207ENST00000402434 RXRBP28702 533 aa26.82■■□□□ 1.88
RTN4-207ENST00000402434 NLRP6P59044 892 aa26.82■■□□□ 1.88
RTN4-207ENST00000402434 TRPC5Q9UL62 973 aaPredicted RBP26.82■■□□□ 1.88
RTN4-207ENST00000402434 PHRF1Q9P1Y6 1649 aaKnown RBP26.82■■□□□ 1.88
RTN4-207ENST00000402434 PIK3C2AO00443 1686 aa26.81■■□□□ 1.88
RTN4-207ENST00000402434 UNC5CLQ8IV45 518 aa26.81■■□□□ 1.88
RTN4-207ENST00000402434 ATRNO75882 1429 aa26.8■■□□□ 1.88
RTN4-207ENST00000402434 EDC4Q6P2E9 1401 aaKnown RBP26.8■■□□□ 1.88
RTN4-207ENST00000402434 GCP02774 474 aa26.8■■□□□ 1.88
RTN4-207ENST00000402434 RBM6P78332 1123 aaKnown RBP26.79■■□□□ 1.88
RTN4-207ENST00000402434 KIAA0232Q92628 1395 aa26.78■■□□□ 1.88
RTN4-207ENST00000402434 PRDM11Q9NQV5 511 aa26.78■■□□□ 1.88
RTN4-207ENST00000402434 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.78■■□□□ 1.88
RTN4-207ENST00000402434 CPDO75976 1380 aa26.77■■□□□ 1.88
RTN4-207ENST00000402434 ANKRD36BQ8N2N9 1353 aa26.77■■□□□ 1.88
RTN4-207ENST00000402434 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.77■■□□□ 1.881e-7■■■□□ 14.8
RTN4-207ENST00000402434 NWD2Q9ULI1 1742 aa26.77■■□□□ 1.88
RTN4-207ENST00000402434 SOCS7O14512 581 aa26.76■■□□□ 1.87
RTN4-207ENST00000402434 ZC3H6P61129 1189 aaKnown RBP26.76■■□□□ 1.87
RTN4-207ENST00000402434 COL14A1Q05707 1796 aaKnown RBP26.76■■□□□ 1.87
RTN4-207ENST00000402434 PLCH1Q4KWH8 1693 aa26.76■■□□□ 1.87
RTN4-207ENST00000402434 SLIT3O75094 1523 aa26.75■■□□□ 1.87
RTN4-207ENST00000402434 CDK12Q9NYV4 1490 aaPredicted RBP26.75■■□□□ 1.87
RTN4-207ENST00000402434 USP31Q70CQ4 1352 aa26.75■■□□□ 1.87
RTN4-207ENST00000402434 BTG4Q9NY30 223 aa26.74■■□□□ 1.87
RTN4-207ENST00000402434 NME9Q86XW9 330 aa26.73■■□□□ 1.87
RTN4-207ENST00000402434 GJD4Q96KN9 370 aaPredicted RBP26.73■■□□□ 1.87
RTN4-207ENST00000402434 VPS72Q15906 364 aa26.72■■□□□ 1.87
RTN4-207ENST00000402434 CHRNA2Q15822 529 aa26.71■■□□□ 1.87
RTN4-207ENST00000402434 KCNH5Q8NCM2 988 aa26.71■■□□□ 1.87
RTN4-207ENST00000402434 ZRANB1Q9UGI0 708 aa26.7■■□□□ 1.87
RTN4-207ENST00000402434 MYOM1P52179 1685 aa26.69■■□□□ 1.86
RTN4-207ENST00000402434 USP54Q70EL1 1684 aa26.68■■□□□ 1.86
RTN4-207ENST00000402434 NRAPQ86VF7 1730 aa26.67■■□□□ 1.86
RTN4-207ENST00000402434 C11orf95C9JLR9 678 aaPredicted RBP26.67■■□□□ 1.86
RTN4-207ENST00000402434 RGS12O14924 1447 aa26.65■■□□□ 1.86
RTN4-207ENST00000402434 ARHGEF25Q86VW2 580 aa26.65■■□□□ 1.86
RTN4-207ENST00000402434 AATKQ6ZMQ8 1374 aa26.64■■□□□ 1.86
RTN4-207ENST00000402434 LMO7Q8WWI1 1683 aa26.64■■□□□ 1.86
RTN4-207ENST00000402434 CARD14Q9BXL6 1004 aa26.64■■□□□ 1.86
RTN4-207ENST00000402434 OVOS2A0A0J9YW53 1432 aa26.64■■□□□ 1.85
RTN4-207ENST00000402434 OVOS2Q6IE36 1432 aa26.64■■□□□ 1.85
RTN4-207ENST00000402434 CAMTA1Q9Y6Y1 1673 aa26.64■■□□□ 1.85
RTN4-207ENST00000402434 GLI3P10071 1580 aa26.63■■□□□ 1.85
RTN4-207ENST00000402434 NFAT5O94916 1531 aa26.63■■□□□ 1.85
RTN4-207ENST00000402434 FYB1O15117 783 aa26.62■■□□□ 1.85
RTN4-207ENST00000402434 POLR3GLQ9BT43 218 aa26.62■■□□□ 1.85
RTN4-207ENST00000402434 ONECUT3O60422 494 aaPredicted RBP26.61■■□□□ 1.85
RTN4-207ENST00000402434 CCDC9Q9Y3X0 531 aaKnown RBP26.61■■□□□ 1.85
RTN4-207ENST00000402434 SPATA31A5Q5VU36 1347 aa26.6■■□□□ 1.85
RTN4-207ENST00000402434 SPATA31A7Q8IWB4 1347 aa26.6■■□□□ 1.85
RTN4-207ENST00000402434 SOX12O15370 315 aa26.6■■□□□ 1.85
RTN4-207ENST00000402434 COL18A1P39060 1754 aa26.58■■□□□ 1.85
RTN4-207ENST00000402434 COG3Q96JB2 828 aa26.58■■□□□ 1.85
RTN4-207ENST00000402434 STRN4Q9NRL3 753 aa26.58■■□□□ 1.85
RTN4-207ENST00000402434 EVA1CP58658 441 aa26.57■■□□□ 1.84
RTN4-207ENST00000402434 ZBTB7CA1YPR0 619 aa26.56■■□□□ 1.84
RTN4-207ENST00000402434 AXIN2Q9Y2T1 843 aa26.56■■□□□ 1.84
RTN4-207ENST00000402434 NSD3Q9BZ95 1437 aa26.56■■□□□ 1.84
RTN4-207ENST00000402434 KIF7Q2M1P5 1343 aa26.56■■□□□ 1.84
RTN4-207ENST00000402434 COL5A2P05997 1499 aaPredicted RBP26.56■■□□□ 1.84
RTN4-207ENST00000402434 SPATA31A1Q5TZJ5 1347 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms