RNA–Protein interactions for RNA: ENST00000402383.3

VIM2P-201, Transcript of vimentin 2, pseudogene, humanhuman

BASIC

Gene VIM2P, Length 1,294 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM2P-201ENST00000402383 C14orf37Q86TY3 774 aa9.79□□□□□ -0.84
VIM2P-201ENST00000402383 LRRC59Q96AG4 307 aaKnown RBP9.79□□□□□ -0.84
VIM2P-201ENST00000402383 C14orf93Q9H972 538 aaKnown RBP9.79□□□□□ -0.84
VIM2P-201ENST00000402383 CDK12Q9NYV4 1490 aaPredicted RBP9.79□□□□□ -0.84
VIM2P-201ENST00000402383 EP400Q96L91 3159 aa9.78□□□□□ -0.84
VIM2P-201ENST00000402383 MAP3K13O43283 966 aa9.78□□□□□ -0.84
VIM2P-201ENST00000402383 SGIP1Q9BQI5 828 aa9.78□□□□□ -0.84
VIM2P-201ENST00000402383 MARF1Q9Y4F3 1742 aaKnown RBP9.78□□□□□ -0.84
VIM2P-201ENST00000402383 KIF1AQ12756 1690 aa9.77□□□□□ -0.84
VIM2P-201ENST00000402383 ADGRB1O14514 1584 aa9.77□□□□□ -0.85
VIM2P-201ENST00000402383 ADGRB2O60241 1585 aa9.77□□□□□ -0.85
VIM2P-201ENST00000402383 YTHDC2Q9H6S0 1430 aaKnown RBP9.77□□□□□ -0.85
VIM2P-201ENST00000402383 ZNF579Q8NAF0 562 aaKnown RBP9.77□□□□□ -0.85
VIM2P-201ENST00000402383 KIAA1210Q9ULL0 1709 aa9.76□□□□□ -0.85
VIM2P-201ENST00000402383 PDAP1Q13442 181 aaKnown RBP9.76□□□□□ -0.85
VIM2P-201ENST00000402383 POTEAQ6S8J7 498 aa9.76□□□□□ -0.85
VIM2P-201ENST00000402383 KIF12Q96FN5 646 aa9.76□□□□□ -0.85
VIM2P-201ENST00000402383 PHF12Q96QT6 1004 aa9.76□□□□□ -0.85
VIM2P-201ENST00000402383 PXDNQ92626 1479 aa9.76□□□□□ -0.85
VIM2P-201ENST00000402383 PNPLA6Q8IY17 1366 aa9.75□□□□□ -0.85
VIM2P-201ENST00000402383 ZNF772Q68DY9 489 aaPredicted RBP9.75□□□□□ -0.85
VIM2P-201ENST00000402383 IFNL1Q8IU54 200 aa9.75□□□□□ -0.85
VIM2P-201ENST00000402383 RGPD8O14715 1765 aaPredicted RBP9.75□□□□□ -0.85
VIM2P-201ENST00000402383 C19orf67A6NJJ6 358 aa9.74□□□□□ -0.85
VIM2P-201ENST00000402383 NKX1-1Q15270 411 aaPredicted RBP9.74□□□□□ -0.85
VIM2P-201ENST00000402383 PSEN1P49768 467 aa9.73□□□□□ -0.85
VIM2P-201ENST00000402383 DHX57Q6P158 1386 aaKnown RBP9.73□□□□□ -0.85
VIM2P-201ENST00000402383 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.73□□□□□ -0.85
VIM2P-201ENST00000402383 RGL3Q3MIN7 710 aa9.72□□□□□ -0.85
VIM2P-201ENST00000402383 NPHP3Q7Z494 1330 aa9.72□□□□□ -0.85
VIM2P-201ENST00000402383 USP32Q8NFA0 1604 aa9.71□□□□□ -0.85
VIM2P-201ENST00000402383 ORAI2Q96SN7 254 aa9.71□□□□□ -0.86
VIM2P-201ENST00000402383 ANKARQ7Z5J8 1434 aa9.71□□□□□ -0.86
VIM2P-201ENST00000402383 PLEKHH1Q9ULM0 1364 aa9.7□□□□□ -0.86
VIM2P-201ENST00000402383 ARHGEF28Q8N1W1 1705 aaKnown RBP9.7□□□□□ -0.86
VIM2P-201ENST00000402383 SRCAPQ6ZRS2 3230 aa9.69□□□□□ -0.86
VIM2P-201ENST00000402383 HAX1O00165 279 aa9.69□□□□□ -0.86
VIM2P-201ENST00000402383 TMEM132EQ6IEE7 984 aa9.69□□□□□ -0.86
VIM2P-201ENST00000402383 WAPLQ7Z5K2 1190 aa9.69□□□□□ -0.86
VIM2P-201ENST00000402383 FNBP4Q8N3X1 1017 aaPredicted RBP9.69□□□□□ -0.86
VIM2P-201ENST00000402383 TRPM3Q9HCF6 1732 aaPredicted RBP9.68□□□□□ -0.86
VIM2P-201ENST00000402383 CFAP70Q5T0N1 1121 aa9.68□□□□□ -0.86
VIM2P-201ENST00000402383 ITSN1Q15811 1721 aa9.68□□□□□ -0.86
VIM2P-201ENST00000402383 ABCA3Q99758 1704 aa9.68□□□□□ -0.86
VIM2P-201ENST00000402383 NWD2Q9ULI1 1742 aa9.68□□□□□ -0.86
VIM2P-201ENST00000402383 SBNO1A3KN83 1393 aa9.67□□□□□ -0.86
VIM2P-201ENST00000402383 EIF3AQ14152 1382 aaKnown RBP9.67□□□□□ -0.86
VIM2P-201ENST00000402383 AFF2P51816 1311 aa9.67□□□□□ -0.86
VIM2P-201ENST00000402383 GTPBP6O43824 516 aaPredicted RBP9.67□□□□□ -0.86
VIM2P-201ENST00000402383 TSHZ2Q9NRE2 1034 aa9.67□□□□□ -0.86
VIM2P-201ENST00000402383 ALS2Q96Q42 1657 aa9.67□□□□□ -0.86
VIM2P-201ENST00000402383 SPATA31A3Q5VYP0 1347 aa9.66□□□□□ -0.86
VIM2P-201ENST00000402383 CRYBG1Q9Y4K1 1723 aa9.66□□□□□ -0.86
VIM2P-201ENST00000402383 ESCO1Q5FWF5 840 aa9.66□□□□□ -0.86
VIM2P-201ENST00000402383 DDX17Q92841 729 aaKnown RBP9.66□□□□□ -0.86
VIM2P-201ENST00000402383 TULP4Q9NRJ4 1543 aa9.66□□□□□ -0.86
VIM2P-201ENST00000402383 ATRNO75882 1429 aa9.65□□□□□ -0.86
VIM2P-201ENST00000402383 RXRBP28702 533 aa9.65□□□□□ -0.86
VIM2P-201ENST00000402383 RBM6P78332 1123 aaKnown RBP9.65□□□□□ -0.86
VIM2P-201ENST00000402383 MEX3CQ5U5Q3 659 aaKnown RBP9.65□□□□□ -0.86
VIM2P-201ENST00000402383 VSIG10Q8N0Z9 540 aa9.65□□□□□ -0.86
VIM2P-201ENST00000402383 MS4A3Q96HJ5 214 aa9.65□□□□□ -0.86
VIM2P-201ENST00000402383 STK26Q9P289 416 aa9.65□□□□□ -0.86
VIM2P-201ENST00000402383 SLIT2O94813 1529 aa9.65□□□□□ -0.86
VIM2P-201ENST00000402383 BCL9LQ86UU0 1499 aa9.65□□□□□ -0.87
VIM2P-201ENST00000402383 TOPAZ1Q8N9V7 1692 aa9.64□□□□□ -0.87
VIM2P-201ENST00000402383 FOXO3O43524 673 aa9.64□□□□□ -0.87
VIM2P-201ENST00000402383 PRAM1Q96QH2 718 aa9.64□□□□□ -0.87
VIM2P-201ENST00000402383 TNS3Q68CZ2 1445 aa9.64□□□□□ -0.87
VIM2P-201ENST00000402383 DCAF11Q8TEB1 546 aa9.63□□□□□ -0.87
VIM2P-201ENST00000402383 CABP2Q9NPB3 220 aa9.63□□□□□ -0.87
VIM2P-201ENST00000402383 RYDENQ9NUL5 291 aaKnown RBP9.63□□□□□ -0.87
VIM2P-201ENST00000402383 PHF8Q9UPP1 1060 aa9.63□□□□□ -0.87
VIM2P-201ENST00000402383 ARHGEF10O15013 1369 aa9.63□□□□□ -0.87
VIM2P-201ENST00000402383 PSME1Q06323 249 aa9.62□□□□□ -0.87
VIM2P-201ENST00000402383 QTRT2Q9H974 415 aaKnown RBP9.62□□□□□ -0.87
VIM2P-201ENST00000402383 RGS12O14924 1447 aa9.62□□□□□ -0.87
VIM2P-201ENST00000402383 PLCH1Q4KWH8 1693 aa9.61□□□□□ -0.87
VIM2P-201ENST00000402383 ATP7BP35670 1465 aa9.61□□□□□ -0.87
VIM2P-201ENST00000402383 NUTM2BA6NNL0 878 aaPredicted RBP9.61□□□□□ -0.87
VIM2P-201ENST00000402383 NUTM2EB1AL46 878 aaPredicted RBP9.61□□□□□ -0.87
VIM2P-201ENST00000402383 WASLO00401 505 aaPredicted RBP9.61□□□□□ -0.87
VIM2P-201ENST00000402383 KRT28Q7Z3Y7 464 aa9.61□□□□□ -0.87
VIM2P-201ENST00000402383 NUTM2AQ8IVF1 878 aaPredicted RBP9.61□□□□□ -0.87
VIM2P-201ENST00000402383 UPF1Q92900 1129 aaKnown RBP eCLIP9.61□□□□□ -0.87
VIM2P-201ENST00000402383 NGLY1Q96IV0 654 aa9.61□□□□□ -0.87
VIM2P-201ENST00000402383 TRPC5Q9UL62 973 aaPredicted RBP9.61□□□□□ -0.87
VIM2P-201ENST00000402383 TRPC6Q9Y210 931 aa9.61□□□□□ -0.87
VIM2P-201ENST00000402383 NRAPQ86VF7 1730 aa9.6□□□□□ -0.87
VIM2P-201ENST00000402383 EVX2Q03828 476 aa9.6□□□□□ -0.87
VIM2P-201ENST00000402383 C8orf37Q96NL8 207 aa9.6□□□□□ -0.87
VIM2P-201ENST00000402383 PRR36Q9H6K5 1346 aa9.59□□□□□ -0.87
VIM2P-201ENST00000402383 ONECUT3O60422 494 aaPredicted RBP9.59□□□□□ -0.87
VIM2P-201ENST00000402383 EFCAB3Q8N7B9 438 aa9.59□□□□□ -0.87
VIM2P-201ENST00000402383 TMEM106CQ9BVX2 250 aa9.59□□□□□ -0.87
VIM2P-201ENST00000402383 POGKQ9P215 609 aa9.59□□□□□ -0.87
VIM2P-201ENST00000402383 USP21Q9UK80 565 aa9.59□□□□□ -0.87
VIM2P-201ENST00000402383 KDM2AQ9Y2K7 1162 aa9.59□□□□□ -0.87
VIM2P-201ENST00000402383 COL14A1Q05707 1796 aaKnown RBP9.59□□□□□ -0.87
VIM2P-201ENST00000402383 POLR3AO14802 1390 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms