RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 TERF2IPQ9NYB0 399 aa21.16■□□□□ 0.98
CHRFAM7A-203ENST00000401522 CD163L1Q9NR16 1453 aa21.16■□□□□ 0.98
CHRFAM7A-203ENST00000401522 ANKRD36BQ8N2N9 1353 aa21.16■□□□□ 0.98
CHRFAM7A-203ENST00000401522 MSH5O43196 834 aa21.16■□□□□ 0.98
CHRFAM7A-203ENST00000401522 ORAI2Q96SN7 254 aa21.16■□□□□ 0.98
CHRFAM7A-203ENST00000401522 CPSF1Q10570 1443 aaKnown RBP21.15■□□□□ 0.98
CHRFAM7A-203ENST00000401522 PHF8Q9UPP1 1060 aa21.15■□□□□ 0.98
CHRFAM7A-203ENST00000401522 POLR3AO14802 1390 aaPredicted RBP21.15■□□□□ 0.98
CHRFAM7A-203ENST00000401522 PMFBP1Q8TBY8 1022 aa21.14■□□□□ 0.97
CHRFAM7A-203ENST00000401522 ZNF692Q9BU19 519 aaPredicted RBP21.14■□□□□ 0.97
CHRFAM7A-203ENST00000401522 ACEP12821 1306 aa21.13■□□□□ 0.97
CHRFAM7A-203ENST00000401522 PDE3BQ13370 1112 aa21.13■□□□□ 0.97
CHRFAM7A-203ENST00000401522 HDGFL2Q7Z4V5 671 aaPredicted RBP21.13■□□□□ 0.97
CHRFAM7A-203ENST00000401522 A0A1W2PP64 1363 aa21.13■□□□□ 0.97
CHRFAM7A-203ENST00000401522 CCDC136Q96JN2 1154 aa21.12■□□□□ 0.97
CHRFAM7A-203ENST00000401522 CARD14Q9BXL6 1004 aa21.12■□□□□ 0.97
CHRFAM7A-203ENST00000401522 NGDNQ8NEJ9 315 aaKnown RBP21.11■□□□□ 0.97
CHRFAM7A-203ENST00000401522 TOM1O60784 492 aa21.1■□□□□ 0.97
CHRFAM7A-203ENST00000401522 KIF1AQ12756 1690 aa21.1■□□□□ 0.97
CHRFAM7A-203ENST00000401522 BRINP3Q76B58 766 aa21.1■□□□□ 0.97
CHRFAM7A-203ENST00000401522 AKAP12Q02952 1782 aa21.09■□□□□ 0.97
CHRFAM7A-203ENST00000401522 FOXO3O43524 673 aa21.07■□□□□ 0.96
CHRFAM7A-203ENST00000401522 KNSTRNQ9Y448 316 aa21.06■□□□□ 0.96
CHRFAM7A-203ENST00000401522 USP6P35125 1406 aa21.06■□□□□ 0.96
CHRFAM7A-203ENST00000401522 BLMP54132 1417 aaPredicted RBP21.06■□□□□ 0.96
CHRFAM7A-203ENST00000401522 MON2Q7Z3U7 1717 aa21.06■□□□□ 0.96
CHRFAM7A-203ENST00000401522 EDC4Q6P2E9 1401 aaKnown RBP21.05■□□□□ 0.96
CHRFAM7A-203ENST00000401522 NSD3Q9BZ95 1437 aa21.05■□□□□ 0.96
CHRFAM7A-203ENST00000401522 RRP1P56182 461 aaKnown RBP21.05■□□□□ 0.96
CHRFAM7A-203ENST00000401522 PSME1Q06323 249 aa21.05■□□□□ 0.96
CHRFAM7A-203ENST00000401522 SSH2Q76I76 1423 aa21.04■□□□□ 0.96
CHRFAM7A-203ENST00000401522 UBAP1LF5GYI3 381 aa21.04■□□□□ 0.96
CHRFAM7A-203ENST00000401522 ERICH6Q7L0X2 663 aa21.04■□□□□ 0.96
CHRFAM7A-203ENST00000401522 NPHP3Q7Z494 1330 aa21.03■□□□□ 0.96
CHRFAM7A-203ENST00000401522 SENP3-EIF4A1A0A087X0R7 540 aa21.03■□□□□ 0.96
CHRFAM7A-203ENST00000401522 RCAN3Q9UKA8 241 aa21.03■□□□□ 0.96
CHRFAM7A-203ENST00000401522 CC2D1BQ5T0F9 858 aaKnown RBP21.02■□□□□ 0.96
CHRFAM7A-203ENST00000401522 AMER1Q5JTC6 1135 aaPredicted RBP21.02■□□□□ 0.95
CHRFAM7A-203ENST00000401522 ROBO1Q9Y6N7 1651 aa21.01■□□□□ 0.95
CHRFAM7A-203ENST00000401522 NRKQ7Z2Y5 1582 aa21.01■□□□□ 0.95
CHRFAM7A-203ENST00000401522 CGNL1Q0VF96 1302 aa21.01■□□□□ 0.95
CHRFAM7A-203ENST00000401522 TTC21BQ7Z4L5 1316 aa21.01■□□□□ 0.95
CHRFAM7A-203ENST00000401522 KRT28Q7Z3Y7 464 aa21■□□□□ 0.95
CHRFAM7A-203ENST00000401522 NPC1L1Q9UHC9 1359 aa21■□□□□ 0.95
CHRFAM7A-203ENST00000401522 DDX17Q92841 729 aaKnown RBP20.99■□□□□ 0.95
CHRFAM7A-203ENST00000401522 TTC21AQ8NDW8 1320 aa20.99■□□□□ 0.95
CHRFAM7A-203ENST00000401522 FYB1O15117 783 aa20.98■□□□□ 0.95
CHRFAM7A-203ENST00000401522 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.98■□□□□ 0.95
CHRFAM7A-203ENST00000401522 PXDNQ92626 1479 aa20.98■□□□□ 0.95
CHRFAM7A-203ENST00000401522 XPCQ01831 940 aaPredicted RBP20.98■□□□□ 0.95
CHRFAM7A-203ENST00000401522 SOS2Q07890 1332 aaPredicted RBP20.98■□□□□ 0.95
CHRFAM7A-203ENST00000401522 NHSL1Q5SYE7 1610 aa20.97■□□□□ 0.95
CHRFAM7A-203ENST00000401522 PIP4K2BP78356 416 aa20.97■□□□□ 0.95
CHRFAM7A-203ENST00000401522 TRPM3Q9HCF6 1732 aaPredicted RBP20.96■□□□□ 0.95
CHRFAM7A-203ENST00000401522 SBNO1A3KN83 1393 aa20.96■□□□□ 0.95
CHRFAM7A-203ENST00000401522 NSD2O96028 1365 aa20.96■□□□□ 0.95
CHRFAM7A-203ENST00000401522 PAK3O75914 559 aaPredicted RBP20.95■□□□□ 0.94
CHRFAM7A-203ENST00000401522 AHDC1Q5TGY3 1603 aaPredicted RBP20.94■□□□□ 0.94
CHRFAM7A-203ENST00000401522 NME9Q86XW9 330 aa20.94■□□□□ 0.94
CHRFAM7A-203ENST00000401522 SALL2Q9Y467 1007 aaPredicted RBP20.93■□□□□ 0.94
CHRFAM7A-203ENST00000401522 ABTB2Q8N961 1025 aa20.92■□□□□ 0.94
CHRFAM7A-203ENST00000401522 GGNBP2Q9H3C7 697 aa20.92■□□□□ 0.94
CHRFAM7A-203ENST00000401522 KIF20BQ96Q89 1820 aa20.92■□□□□ 0.94
CHRFAM7A-203ENST00000401522 USP31Q70CQ4 1352 aa20.91■□□□□ 0.94
CHRFAM7A-203ENST00000401522 EXOC6Q8TAG9 804 aa20.91■□□□□ 0.94
CHRFAM7A-203ENST00000401522 SPATA31A3Q5VYP0 1347 aa20.9■□□□□ 0.94
CHRFAM7A-203ENST00000401522 PIK3C2AO00443 1686 aa20.9■□□□□ 0.94
CHRFAM7A-203ENST00000401522 ALS2Q96Q42 1657 aa20.89■□□□□ 0.94
CHRFAM7A-203ENST00000401522 CDCA7LQ96GN5 454 aa20.89■□□□□ 0.93
CHRFAM7A-203ENST00000401522 ZRANB1Q9UGI0 708 aa20.89■□□□□ 0.93
CHRFAM7A-203ENST00000401522 TNS3Q68CZ2 1445 aa20.89■□□□□ 0.93
CHRFAM7A-203ENST00000401522 PPP2R1AP30153 589 aa20.88■□□□□ 0.93
CHRFAM7A-203ENST00000401522 COG3Q96JB2 828 aa20.88■□□□□ 0.93
CHRFAM7A-203ENST00000401522 ANKRD26Q9UPS8 1709 aa20.88■□□□□ 0.93
CHRFAM7A-203ENST00000401522 OVOS2A0A0J9YW53 1432 aa20.88■□□□□ 0.93
CHRFAM7A-203ENST00000401522 OVOS2Q6IE36 1432 aa20.88■□□□□ 0.93
CHRFAM7A-203ENST00000401522 NLRP6P59044 892 aa20.88■□□□□ 0.93
CHRFAM7A-203ENST00000401522 MORC1Q86VD1 984 aa20.87■□□□□ 0.93
CHRFAM7A-203ENST00000401522 LRRC59Q96AG4 307 aaKnown RBP20.87■□□□□ 0.93
CHRFAM7A-203ENST00000401522 USP54Q70EL1 1684 aa20.87■□□□□ 0.93
CHRFAM7A-203ENST00000401522 ARHGEF10O15013 1369 aa20.86■□□□□ 0.93
CHRFAM7A-203ENST00000401522 LMOD2Q6P5Q4 547 aa20.86■□□□□ 0.93
CHRFAM7A-203ENST00000401522 PHLPP1O60346 1717 aa20.86■□□□□ 0.93
CHRFAM7A-203ENST00000401522 TCERG1O14776 1098 aaKnown RBP20.85■□□□□ 0.93
CHRFAM7A-203ENST00000401522 NUTM2GQ5VZR2 741 aa20.85■□□□□ 0.93
CHRFAM7A-203ENST00000401522 ADAMTS8Q9UP79 889 aa20.85■□□□□ 0.93
CHRFAM7A-203ENST00000401522 NOP58Q9Y2X3 529 aaKnown RBP20.85■□□□□ 0.93
CHRFAM7A-203ENST00000401522 COL16A1Q07092 1604 aaPredicted RBP20.84■□□□□ 0.93
CHRFAM7A-203ENST00000401522 ANP32AP39687 249 aaKnown RBP20.84■□□□□ 0.93
CHRFAM7A-203ENST00000401522 WDR43Q15061 677 aaKnown RBP eCLIP20.84■□□□□ 0.93
CHRFAM7A-203ENST00000401522 MARF1Q9Y4F3 1742 aaKnown RBP20.84■□□□□ 0.93
CHRFAM7A-203ENST00000401522 USP19O94966 1318 aa20.82■□□□□ 0.92
CHRFAM7A-203ENST00000401522 MS4A1P11836 297 aa20.8■□□□□ 0.92
CHRFAM7A-203ENST00000401522 AATKQ6ZMQ8 1374 aa20.8■□□□□ 0.92
CHRFAM7A-203ENST00000401522 TNNT2P45379 298 aaPredicted RBP20.79■□□□□ 0.92
CHRFAM7A-203ENST00000401522 MED1Q15648 1581 aaPredicted RBP20.79■□□□□ 0.92
CHRFAM7A-203ENST00000401522 KCNH5Q8NCM2 988 aa20.78■□□□□ 0.92
CHRFAM7A-203ENST00000401522 IPO9Q96P70 1041 aaKnown RBP20.78■□□□□ 0.92
CHRFAM7A-203ENST00000401522 SLIT3O75094 1523 aa20.78■□□□□ 0.92
CHRFAM7A-203ENST00000401522 ZNF521Q96K83 1311 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms