RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 CAMSAP2Q08AD1 1489 aa7.73□□□□□ -1.17
HMGB3P7-201ENST00000400214 ADGBQ8N7X0 1667 aa7.73□□□□□ -1.17
HMGB3P7-201ENST00000400214 C9orf84Q5VXU9 1444 aa7.72□□□□□ -1.17
HMGB3P7-201ENST00000400214 CARNS1A5YM72 827 aa7.72□□□□□ -1.17
HMGB3P7-201ENST00000400214 TTLL12Q14166 644 aaPredicted RBP7.72□□□□□ -1.17
HMGB3P7-201ENST00000400214 SH3D19Q5HYK7 790 aa7.72□□□□□ -1.17
HMGB3P7-201ENST00000400214 DDX27Q96GQ7 796 aaKnown RBP7.72□□□□□ -1.17
HMGB3P7-201ENST00000400214 AGLP35573 1532 aa7.72□□□□□ -1.17
HMGB3P7-201ENST00000400214 ATP7AQ04656 1500 aa7.72□□□□□ -1.17
HMGB3P7-201ENST00000400214 RTEL1-TNFRSF6BF6WH68 1400 aa7.71□□□□□ -1.17
HMGB3P7-201ENST00000400214 HNRNPMP52272 730 aaKnown RBP eCLIP7.71□□□□□ -1.18
HMGB3P7-201ENST00000400214 FBXO22Q8NEZ5 403 aa7.71□□□□□ -1.18
HMGB3P7-201ENST00000400214 OXER1Q8TDS5 423 aa7.71□□□□□ -1.18
HMGB3P7-201ENST00000400214 SETD1BQ9UPS6 1966 aaKnown RBP7.71□□□□□ -1.18
HMGB3P7-201ENST00000400214 ZNF644Q9H582 1327 aaPredicted RBP7.71□□□□□ -1.18
HMGB3P7-201ENST00000400214 FER1L4A9Z1Z3 1794 aa7.71□□□□□ -1.18
HMGB3P7-201ENST00000400214 MAST1Q9Y2H9 1570 aa7.71□□□□□ -1.18
HMGB3P7-201ENST00000400214 CROCC2H7BZ55 1655 aa7.7□□□□□ -1.18
HMGB3P7-201ENST00000400214 CCDC141Q6ZP82 1450 aa7.7□□□□□ -1.18
HMGB3P7-201ENST00000400214 PLXNC1O60486 1568 aa7.7□□□□□ -1.18
HMGB3P7-201ENST00000400214 SPAG9O60271 1321 aaKnown RBP7.7□□□□□ -1.18
HMGB3P7-201ENST00000400214 MADDQ8WXG6 1647 aa7.7□□□□□ -1.18
HMGB3P7-201ENST00000400214 PTPN23Q9H3S7 1636 aa7.7□□□□□ -1.18
HMGB3P7-201ENST00000400214 TCOF1Q13428 1488 aaKnown RBP7.69□□□□□ -1.18
HMGB3P7-201ENST00000400214 RBM47A0AV96 593 aaKnown RBP7.69□□□□□ -1.18
HMGB3P7-201ENST00000400214 ARSIQ5FYB1 569 aa7.69□□□□□ -1.18
HMGB3P7-201ENST00000400214 GIGYF2Q6Y7W6 1299 aaKnown RBP7.69□□□□□ -1.18
HMGB3P7-201ENST00000400214 CRISPLD2Q9H0B8 497 aa7.69□□□□□ -1.18
HMGB3P7-201ENST00000400214 USTQ9Y2C2 406 aa7.69□□□□□ -1.18
HMGB3P7-201ENST00000400214 FGD6Q6ZV73 1430 aa7.69□□□□□ -1.18
HMGB3P7-201ENST00000400214 RIMS1Q86UR5 1692 aaKnown RBP7.68□□□□□ -1.18
HMGB3P7-201ENST00000400214 SPDYE5A6NIY4 337 aa7.68□□□□□ -1.18
HMGB3P7-201ENST00000400214 SMARCA5O60264 1052 aaPredicted RBP7.68□□□□□ -1.18
HMGB3P7-201ENST00000400214 CALR3Q96L12 384 aaKnown RBP7.68□□□□□ -1.18
HMGB3P7-201ENST00000400214 KIAA1522Q9P206 1035 aaPredicted RBP7.68□□□□□ -1.18
HMGB3P7-201ENST00000400214 HCSTQ9UBK5 93 aa7.68□□□□□ -1.18
HMGB3P7-201ENST00000400214 DNMT1P26358 1616 aaKnown RBP7.67□□□□□ -1.18
HMGB3P7-201ENST00000400214 PBX2P40425 430 aa7.67□□□□□ -1.18
HMGB3P7-201ENST00000400214 EFCAB3Q8N7B9 438 aa7.67□□□□□ -1.18
HMGB3P7-201ENST00000400214 A2MP01023 1474 aa7.67□□□□□ -1.18
HMGB3P7-201ENST00000400214 PTPRMP28827 1452 aa7.67□□□□□ -1.18
HMGB3P7-201ENST00000400214 SHANK2Q9UPX8 1470 aa7.67□□□□□ -1.18
HMGB3P7-201ENST00000400214 MROH2AA6NES4 1674 aa7.67□□□□□ -1.18
HMGB3P7-201ENST00000400214 CANXP27824 592 aaKnown RBP7.66□□□□□ -1.18
HMGB3P7-201ENST00000400214 PROCA1Q8NCQ7 364 aaPredicted RBP7.66□□□□□ -1.18
HMGB3P7-201ENST00000400214 PBXIP1Q96AQ6 731 aa7.66□□□□□ -1.18
HMGB3P7-201ENST00000400214 SNRKQ9NRH2 765 aa7.66□□□□□ -1.18
HMGB3P7-201ENST00000400214 ARID4BQ4LE39 1312 aaPredicted RBP7.66□□□□□ -1.18
HMGB3P7-201ENST00000400214 TBC1D12O60347 775 aa7.65□□□□□ -1.18
HMGB3P7-201ENST00000400214 CSB-PGBD3P0DP91 1061 aa7.65□□□□□ -1.18
HMGB3P7-201ENST00000400214 NLRP6P59044 892 aa7.65□□□□□ -1.18
HMGB3P7-201ENST00000400214 SKIV2LQ15477 1246 aaKnown RBP7.65□□□□□ -1.18
HMGB3P7-201ENST00000400214 DHX29Q7Z478 1369 aaKnown RBP7.65□□□□□ -1.18
HMGB3P7-201ENST00000400214 KHSRPQ92945 711 aaKnown RBP eCLIP7.65□□□□□ -1.18
HMGB3P7-201ENST00000400214 MRRFQ96E11 262 aaKnown RBP7.65□□□□□ -1.18
HMGB3P7-201ENST00000400214 SPATA32Q96LK8 384 aa7.65□□□□□ -1.18
HMGB3P7-201ENST00000400214 REPIN1Q9BWE0 567 aaKnown RBP7.65□□□□□ -1.18
HMGB3P7-201ENST00000400214 PHF8Q9UPP1 1060 aa7.65□□□□□ -1.18
HMGB3P7-201ENST00000400214 C3P01024 1663 aa7.64□□□□□ -1.19
HMGB3P7-201ENST00000400214 EIF2AK4Q9P2K8 1649 aaKnown RBP7.64□□□□□ -1.19
HMGB3P7-201ENST00000400214 ABCC5O15440 1437 aa7.64□□□□□ -1.19
HMGB3P7-201ENST00000400214 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.64□□□□□ -1.19
HMGB3P7-201ENST00000400214 POM121CA8CG34 1229 aa7.64□□□□□ -1.19
HMGB3P7-201ENST00000400214 TSPY4P0CV99 314 aa7.64□□□□□ -1.19
HMGB3P7-201ENST00000400214 TSPY10P0CW01 314 aa7.64□□□□□ -1.19
HMGB3P7-201ENST00000400214 FECHP22830 423 aa7.64□□□□□ -1.19
HMGB3P7-201ENST00000400214 POTEEQ6S8J3 1075 aa7.64□□□□□ -1.19
HMGB3P7-201ENST00000400214 CERS3Q8IU89 383 aa7.64□□□□□ -1.19
HMGB3P7-201ENST00000400214 GLMNQ92990 594 aa7.64□□□□□ -1.19
HMGB3P7-201ENST00000400214 RNF17Q9BXT8 1623 aaKnown RBP7.63□□□□□ -1.19
HMGB3P7-201ENST00000400214 FAM135AQ9P2D6 1515 aa7.63□□□□□ -1.19
HMGB3P7-201ENST00000400214 DAPK1P53355 1430 aa7.63□□□□□ -1.19
HMGB3P7-201ENST00000400214 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.63□□□□□ -1.19
HMGB3P7-201ENST00000400214 CNTLNQ9NXG0 1405 aa7.62□□□□□ -1.19
HMGB3P7-201ENST00000400214 NUTM2FA1L443 756 aa7.62□□□□□ -1.19
HMGB3P7-201ENST00000400214 DPYSL4O14531 572 aa7.62□□□□□ -1.19
HMGB3P7-201ENST00000400214 DRC1Q96MC2 740 aa7.62□□□□□ -1.19
HMGB3P7-201ENST00000400214 GDPD2Q9HCC8 539 aa7.62□□□□□ -1.19
HMGB3P7-201ENST00000400214 CLTCQ00610 1675 aaKnown RBP7.62□□□□□ -1.19
HMGB3P7-201ENST00000400214 DUOX2Q9NRD8 1548 aa7.62□□□□□ -1.19
HMGB3P7-201ENST00000400214 ADGRL2O95490 1459 aa7.62□□□□□ -1.19
HMGB3P7-201ENST00000400214 PREX1Q8TCU6 1659 aa7.61□□□□□ -1.19
HMGB3P7-201ENST00000400214 GNPATO15228 680 aa7.61□□□□□ -1.19
HMGB3P7-201ENST00000400214 RFX1P22670 979 aa7.61□□□□□ -1.19
HMGB3P7-201ENST00000400214 MS4A4AQ96JQ5 239 aa7.61□□□□□ -1.19
HMGB3P7-201ENST00000400214 ZC3H13Q5T200 1668 aaKnown RBP7.6□□□□□ -1.19
HMGB3P7-201ENST00000400214 DEPDC5O75140 1603 aa7.6□□□□□ -1.19
HMGB3P7-201ENST00000400214 MLECQ14165 292 aa7.6□□□□□ -1.19
HMGB3P7-201ENST00000400214 PDIA6Q15084 440 aa7.6□□□□□ -1.19
HMGB3P7-201ENST00000400214 TXNDC2Q86VQ3 553 aa7.6□□□□□ -1.19
HMGB3P7-201ENST00000400214 NCOA1Q15788 1441 aa7.6□□□□□ -1.19
HMGB3P7-201ENST00000400214 ERBINQ96RT1 1412 aa7.6□□□□□ -1.19
HMGB3P7-201ENST00000400214 RRBP1Q9P2E9 1410 aaKnown RBP7.6□□□□□ -1.19
HMGB3P7-201ENST00000400214 MROH1Q8NDA8 1641 aa7.6□□□□□ -1.19
HMGB3P7-201ENST00000400214 POLR3EQ9NVU0 708 aa7.59□□□□□ -1.19
HMGB3P7-201ENST00000400214 CFAP65Q6ZU64 1925 aaKnown RBP7.58□□□□□ -1.2
HMGB3P7-201ENST00000400214 KDM5DQ9BY66 1539 aa7.58□□□□□ -1.2
HMGB3P7-201ENST00000400214 LMTK3Q96Q04 1460 aa7.58□□□□□ -1.2
HMGB3P7-201ENST00000400214 SPDYE16A6NNV3 312 aaPredicted RBP7.58□□□□□ -1.2
HMGB3P7-201ENST00000400214 KDM4AO75164 1064 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms