RNA–Protein interactions for RNA: ENST00000399595.5

CACNA1C-206, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-206ENST00000399595 ZSCAN29Q8IWY8 852 aaPredicted RBP13.36□□□□□ -0.27
CACNA1C-206ENST00000399595 CEP162Q5TB80 1403 aa13.36□□□□□ -0.27
CACNA1C-206ENST00000399595 RRP9O43818 475 aaKnown RBP13.35□□□□□ -0.27
CACNA1C-206ENST00000399595 CLEC11AQ9Y240 323 aa13.35□□□□□ -0.27
CACNA1C-206ENST00000399595 VPS37CA5D8V6 355 aaPredicted RBP13.35□□□□□ -0.27
CACNA1C-206ENST00000399595 RNF214Q8ND24 703 aa13.35□□□□□ -0.27
CACNA1C-206ENST00000399595 PDCL3Q9H2J4 239 aa13.35□□□□□ -0.27
CACNA1C-206ENST00000399595 CPLX1O14810 134 aa13.35□□□□□ -0.27
CACNA1C-206ENST00000399595 EIF3JO75822 258 aaKnown RBP13.35□□□□□ -0.27
CACNA1C-206ENST00000399595 HSPA5P11021 654 aaKnown RBP13.34□□□□□ -0.27
CACNA1C-206ENST00000399595 BICDL1Q6ZP65 573 aa13.34□□□□□ -0.27
CACNA1C-206ENST00000399595 SSR1P43307 286 aaKnown RBP13.34□□□□□ -0.27
CACNA1C-206ENST00000399595 CCDC73Q6ZRK6 1079 aa13.34□□□□□ -0.27
CACNA1C-206ENST00000399595 IPO4Q8TEX9 1081 aaKnown RBP13.34□□□□□ -0.27
CACNA1C-206ENST00000399595 GBP2P32456 591 aaPredicted RBP13.34□□□□□ -0.27
CACNA1C-206ENST00000399595 EZRP15311 586 aaKnown RBP13.34□□□□□ -0.27
CACNA1C-206ENST00000399595 POGZQ7Z3K3 1410 aa13.34□□□□□ -0.27
CACNA1C-206ENST00000399595 NFKBIBQ15653 356 aa13.34□□□□□ -0.27
CACNA1C-206ENST00000399595 NEUROD6Q96NK8 337 aa13.33□□□□□ -0.27
CACNA1C-206ENST00000399595 SRRTQ9BXP5 876 aaKnown RBP13.33□□□□□ -0.27
CACNA1C-206ENST00000399595 TRIM5Q9C035 493 aa13.33□□□□□ -0.28
CACNA1C-206ENST00000399595 ZHX3Q9H4I2 956 aa13.33□□□□□ -0.28
CACNA1C-206ENST00000399595 RRP7AQ9Y3A4 280 aaKnown RBP13.33□□□□□ -0.28
CACNA1C-206ENST00000399595 SPC24Q8NBT2 197 aa13.33□□□□□ -0.28
CACNA1C-206ENST00000399595 SMARCE1Q969G3 411 aa13.33□□□□□ -0.28
CACNA1C-206ENST00000399595 TSPY26PQ9H489 355 aa13.33□□□□□ -0.28
CACNA1C-206ENST00000399595 CGNL1Q0VF96 1302 aa13.33□□□□□ -0.28
CACNA1C-206ENST00000399595 TATP17735 454 aaPredicted RBP13.33□□□□□ -0.28
CACNA1C-206ENST00000399595 G3BP1Q13283 466 aaKnown RBP eCLIP13.33□□□□□ -0.28
CACNA1C-206ENST00000399595 PRDM11Q9NQV5 511 aa13.33□□□□□ -0.28
CACNA1C-206ENST00000399595 UBAP1LF5GYI3 381 aa13.33□□□□□ -0.28
CACNA1C-206ENST00000399595 IFIT2P09913 472 aaKnown RBP13.33□□□□□ -0.28
CACNA1C-206ENST00000399595 TMOD2Q9NZR1 351 aa13.32□□□□□ -0.28
CACNA1C-206ENST00000399595 HSP90AB4PQ58FF6 505 aa13.32□□□□□ -0.28
CACNA1C-206ENST00000399595 CCDC112Q8NEF3 446 aa13.32□□□□□ -0.28
CACNA1C-206ENST00000399595 SMC3Q9UQE7 1217 aa13.32□□□□□ -0.28
CACNA1C-206ENST00000399595 MAP3K9P80192 1104 aa13.32□□□□□ -0.28
CACNA1C-206ENST00000399595 FLIIQ13045 1269 aa13.32□□□□□ -0.28
CACNA1C-206ENST00000399595 FAM177A1Q8N128 213 aaPredicted RBP13.31□□□□□ -0.28
CACNA1C-206ENST00000399595 ATP2B1P20020 1258 aa13.31□□□□□ -0.28
CACNA1C-206ENST00000399595 ZNF219Q9P2Y4 722 aaPredicted RBP13.31□□□□□ -0.28
CACNA1C-206ENST00000399595 TMCO5BA8MYB1 307 aa13.31□□□□□ -0.28
CACNA1C-206ENST00000399595 LETM1O95202 739 aaPredicted RBP13.31□□□□□ -0.28
CACNA1C-206ENST00000399595 KRT18P05783 430 aaKnown RBP13.31□□□□□ -0.28
CACNA1C-206ENST00000399595 RABEP1Q15276 862 aa13.31□□□□□ -0.28
CACNA1C-206ENST00000399595 NUCB2P80303 420 aa13.31□□□□□ -0.28
CACNA1C-206ENST00000399595 LRRCC1Q9C099 1032 aa13.3□□□□□ -0.28
CACNA1C-206ENST00000399595 GRIPAP1Q4V328 841 aa13.3□□□□□ -0.28
CACNA1C-206ENST00000399595 ERLIN1O75477 346 aa13.3□□□□□ -0.28
CACNA1C-206ENST00000399595 DZIP1Q86YF9 867 aaKnown RBP13.3□□□□□ -0.28
CACNA1C-206ENST00000399595 CCDC102AQ96A19 550 aa13.3□□□□□ -0.28
CACNA1C-206ENST00000399595 CABP4P57796 275 aa13.3□□□□□ -0.28
CACNA1C-206ENST00000399595 WASHC4Q2M389 1173 aa13.3□□□□□ -0.28
CACNA1C-206ENST00000399595 CCDC18Q5T9S5 1454 aa13.3□□□□□ -0.28
CACNA1C-206ENST00000399595 ZWINTO95229 277 aa13.3□□□□□ -0.28
CACNA1C-206ENST00000399595 CCDC181Q5TID7 509 aa13.3□□□□□ -0.28
CACNA1C-206ENST00000399595 CA8P35219 290 aa13.29□□□□□ -0.28
CACNA1C-206ENST00000399595 CCDC113Q9H0I3 377 aa13.29□□□□□ -0.28
CACNA1C-206ENST00000399595 CFAP45Q9UL16 551 aa13.29□□□□□ -0.28
CACNA1C-206ENST00000399595 GNL3LQ9NVN8 582 aaKnown RBP13.29□□□□□ -0.28
CACNA1C-206ENST00000399595 SMG6Q86US8 1419 aaKnown RBP13.29□□□□□ -0.28
CACNA1C-206ENST00000399595 SLC3A2P08195 630 aaKnown RBP13.29□□□□□ -0.28
CACNA1C-206ENST00000399595 SMC1AQ14683 1233 aaKnown RBP13.29□□□□□ -0.28
CACNA1C-206ENST00000399595 FMN1Q68DA7 1419 aa13.29□□□□□ -0.28
CACNA1C-206ENST00000399595 CLGNO14967 610 aa13.29□□□□□ -0.28
CACNA1C-206ENST00000399595 UBE4AQ14139 1066 aa13.29□□□□□ -0.28
CACNA1C-206ENST00000399595 BAZ1AQ9NRL2 1556 aaPredicted RBP13.28□□□□□ -0.28
CACNA1C-206ENST00000399595 ZNF428Q96B54 188 aa13.28□□□□□ -0.28
CACNA1C-206ENST00000399595 COMMD10Q9Y6G5 202 aa13.28□□□□□ -0.28
CACNA1C-206ENST00000399595 E9PSI1 815 aa13.28□□□□□ -0.28
CACNA1C-206ENST00000399595 FMNL2Q96PY5 1086 aa13.28□□□□□ -0.28
CACNA1C-206ENST00000399595 SLC26A8Q96RN1 970 aa13.28□□□□□ -0.28
CACNA1C-206ENST00000399595 MPHOSPH9Q99550 1183 aa13.28□□□□□ -0.28
CACNA1C-206ENST00000399595 TRERF1Q96PN7 1200 aa13.28□□□□□ -0.28
CACNA1C-206ENST00000399595 BEGAINQ9BUH8 593 aa13.28□□□□□ -0.28
CACNA1C-206ENST00000399595 TANGO6Q9C0B7 1094 aa13.28□□□□□ -0.28
CACNA1C-206ENST00000399595 CDK5RAP3Q96JB5 506 aa13.28□□□□□ -0.28
CACNA1C-206ENST00000399595 CRBNQ96SW2 442 aa13.28□□□□□ -0.28
CACNA1C-206ENST00000399595 CAVIN1Q6NZI2 390 aaKnown RBP13.28□□□□□ -0.28
CACNA1C-206ENST00000399595 MPNDQ8N594 471 aa13.27□□□□□ -0.28
CACNA1C-206ENST00000399595 CNNM1Q9NRU3 951 aa13.27□□□□□ -0.28
CACNA1C-206ENST00000399595 RUFY2Q8WXA3 655 aa13.27□□□□□ -0.28
CACNA1C-206ENST00000399595 DDX11Q96FC9 970 aa13.27□□□□□ -0.28
CACNA1C-206ENST00000399595 ZKSCAN1P17029 563 aaPredicted RBP13.27□□□□□ -0.29
CACNA1C-206ENST00000399595 SHTN1A0MZ66 631 aa13.27□□□□□ -0.29
CACNA1C-206ENST00000399595 MAGEC2Q9UBF1 373 aaPredicted RBP13.27□□□□□ -0.29
CACNA1C-206ENST00000399595 TSPYL4Q9UJ04 414 aa13.27□□□□□ -0.29
CACNA1C-206ENST00000399595 ZPR1O75312 459 aa13.26□□□□□ -0.29
CACNA1C-206ENST00000399595 REC8O95072 547 aa13.26□□□□□ -0.29
CACNA1C-206ENST00000399595 MAP2K1Q02750 393 aaPredicted RBP13.26□□□□□ -0.29
CACNA1C-206ENST00000399595 TRAK2O60296 914 aa13.26□□□□□ -0.29
CACNA1C-206ENST00000399595 EXOC6Q8TAG9 804 aa13.26□□□□□ -0.29
CACNA1C-206ENST00000399595 CGNQ9P2M7 1197 aaKnown RBP13.26□□□□□ -0.29
CACNA1C-206ENST00000399595 TBC1D2BQ9UPU7 963 aa13.26□□□□□ -0.29
CACNA1C-206ENST00000399595 FILIP1LQ4L180 1135 aa13.26□□□□□ -0.29
CACNA1C-206ENST00000399595 CCDC175P0C221 793 aa13.26□□□□□ -0.29
CACNA1C-206ENST00000399595 FKBP5Q13451 457 aaPredicted RBP13.26□□□□□ -0.29
CACNA1C-206ENST00000399595 PLEKHO1Q53GL0 409 aaPredicted RBP13.25□□□□□ -0.29
CACNA1C-206ENST00000399595 APBB1IPQ7Z5R6 666 aaPredicted RBP13.25□□□□□ -0.29
CACNA1C-206ENST00000399595 CEBPZQ03701 1054 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms