RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 HDAC1Q13547 482 aaPredicted RBP17.59■□□□□ 0.41
APOB-202ENST00000399256 CHGAP10645 457 aaKnown RBP17.58■□□□□ 0.41
APOB-202ENST00000399256 AGLP35573 1532 aa17.58■□□□□ 0.4
APOB-202ENST00000399256 SBNO2Q9Y2G9 1366 aa17.58■□□□□ 0.4
APOB-202ENST00000399256 ESPNB1AK53 854 aa17.58■□□□□ 0.4
APOB-202ENST00000399256 SSH1Q8WYL5 1049 aa17.58■□□□□ 0.4
APOB-202ENST00000399256 TNPO1Q92973 898 aaKnown RBP17.57■□□□□ 0.4
APOB-202ENST00000399256 DDX19BQ9UMR2 479 aa17.57■□□□□ 0.4
APOB-202ENST00000399256 MYO3AQ8NEV4 1616 aa17.57■□□□□ 0.4
APOB-202ENST00000399256 HSP90AA2PQ14568 343 aaPredicted RBP17.56■□□□□ 0.4
APOB-202ENST00000399256 ZC3H13Q5T200 1668 aaKnown RBP17.56■□□□□ 0.4
APOB-202ENST00000399256 NOB1Q9ULX3 412 aaKnown RBP17.56■□□□□ 0.4
APOB-202ENST00000399256 CAMSAP1Q5T5Y3 1602 aa17.56■□□□□ 0.4
APOB-202ENST00000399256 HSP90AB1P08238 724 aaKnown RBP17.56■□□□□ 0.4
APOB-202ENST00000399256 DDIT3P35638 169 aa17.56■□□□□ 0.4
APOB-202ENST00000399256 GLIPR1L2Q4G1C9 344 aa17.56■□□□□ 0.4
APOB-202ENST00000399256 GAS2L3Q86XJ1 694 aa17.56■□□□□ 0.4
APOB-202ENST00000399256 FOXD4L1Q9NU39 408 aa17.56■□□□□ 0.4
APOB-202ENST00000399256 TMEM132EQ6IEE7 984 aa17.55■□□□□ 0.4
APOB-202ENST00000399256 ATF7IPQ6VMQ6 1270 aa17.55■□□□□ 0.4
APOB-202ENST00000399256 SMC5Q8IY18 1101 aa17.55■□□□□ 0.4
APOB-202ENST00000399256 TMEM57Q8N5G2 664 aa17.55■□□□□ 0.4
APOB-202ENST00000399256 NOS1P29475 1434 aa17.55■□□□□ 0.4
APOB-202ENST00000399256 NCOA3Q9Y6Q9 1424 aa17.55■□□□□ 0.4
APOB-202ENST00000399256 LNPKQ9C0E8 428 aa17.55■□□□□ 0.4
APOB-202ENST00000399256 MROH2AA6NES4 1674 aa17.54■□□□□ 0.4
APOB-202ENST00000399256 TRIM44Q96DX7 344 aaPredicted RBP17.54■□□□□ 0.4
APOB-202ENST00000399256 U2SURPO15042 1029 aaKnown RBP17.54■□□□□ 0.4
APOB-202ENST00000399256 NPATQ14207 1427 aa17.53■□□□□ 0.4
APOB-202ENST00000399256 RBM25P49756 843 aaKnown RBP17.53■□□□□ 0.4
APOB-202ENST00000399256 KIF1BO60333 1816 aa17.53■□□□□ 0.4
APOB-202ENST00000399256 CT47B1P0C2W7 299 aaPredicted RBP17.52■□□□□ 0.4
APOB-202ENST00000399256 SNX21Q969T3 373 aa17.52■□□□□ 0.4
APOB-202ENST00000399256 VSIG10Q8N0Z9 540 aa17.52■□□□□ 0.39
APOB-202ENST00000399256 ISY1Q9ULR0 285 aaKnown RBP17.52■□□□□ 0.39
APOB-202ENST00000399256 NEURL4Q96JN8 1562 aa17.52■□□□□ 0.39
APOB-202ENST00000399256 QRICH2Q9H0J4 1663 aa17.51■□□□□ 0.39
APOB-202ENST00000399256 IFT172Q9UG01 1749 aa17.51■□□□□ 0.39
APOB-202ENST00000399256 GBP4Q96PP9 640 aa17.51■□□□□ 0.39
APOB-202ENST00000399256 ZBTB40Q9NUA8 1239 aa17.51■□□□□ 0.39
APOB-202ENST00000399256 RRP9O43818 475 aaKnown RBP17.5■□□□□ 0.39
APOB-202ENST00000399256 NUCB1Q02818 461 aa17.5■□□□□ 0.39
APOB-202ENST00000399256 TRIM35Q9UPQ4 493 aa17.5■□□□□ 0.39
APOB-202ENST00000399256 ADGRB2O60241 1585 aa17.5■□□□□ 0.39
APOB-202ENST00000399256 NRXN1Q9ULB1 1477 aa17.5■□□□□ 0.39
APOB-202ENST00000399256 TMPOP42166 694 aaKnown RBP17.5■□□□□ 0.39
APOB-202ENST00000399256 RAB3GAP1Q15042 981 aa17.5■□□□□ 0.39
APOB-202ENST00000399256 CD2BP2O95400 341 aaKnown RBP17.5■□□□□ 0.39
APOB-202ENST00000399256 CFAP65Q6ZU64 1925 aaKnown RBP17.49■□□□□ 0.39
APOB-202ENST00000399256 CHD1LQ86WJ1 897 aa17.48■□□□□ 0.39
APOB-202ENST00000399256 ARHGAP31Q2M1Z3 1444 aa17.48■□□□□ 0.39
APOB-202ENST00000399256 PKNOX2Q96KN3 472 aa17.48■□□□□ 0.39
APOB-202ENST00000399256 CIZ1Q9ULV3 898 aaPredicted RBP17.48■□□□□ 0.39
APOB-202ENST00000399256 NCBP3Q53F19 620 aaKnown RBP17.47■□□□□ 0.39
APOB-202ENST00000399256 PLEKHF1Q96S99 279 aa17.47■□□□□ 0.39
APOB-202ENST00000399256 KIF2CQ99661 725 aa17.47■□□□□ 0.39
APOB-202ENST00000399256 USP32Q8NFA0 1604 aa17.47■□□□□ 0.39
APOB-202ENST00000399256 RBM42Q9BTD8 480 aaKnown RBP17.46■□□□□ 0.39
APOB-202ENST00000399256 C14orf93Q9H972 538 aaKnown RBP17.46■□□□□ 0.39
APOB-202ENST00000399256 SETBP1Q9Y6X0 1596 aa17.46■□□□□ 0.39
APOB-202ENST00000399256 SKOR2Q2VWA4 1001 aaPredicted RBP17.45■□□□□ 0.38
APOB-202ENST00000399256 CABP2Q9NPB3 220 aa17.45■□□□□ 0.38
APOB-202ENST00000399256 SSFA2P28290 1259 aa17.45■□□□□ 0.38
APOB-202ENST00000399256 ANKRD45Q5TZF3 282 aa17.45■□□□□ 0.38
APOB-202ENST00000399256 RIPK4P57078 832 aa17.44■□□□□ 0.38
APOB-202ENST00000399256 SAFB2Q14151 953 aaKnown RBP eCLIP17.44■□□□□ 0.38
APOB-202ENST00000399256 CLTCQ00610 1675 aaKnown RBP17.44■□□□□ 0.38
APOB-202ENST00000399256 ANKRD36BQ8N2N9 1353 aa17.44■□□□□ 0.38
APOB-202ENST00000399256 KIF16BQ96L93 1317 aa17.44■□□□□ 0.38
APOB-202ENST00000399256 IPO8O15397 1037 aaKnown RBP17.44■□□□□ 0.38
APOB-202ENST00000399256 NUTM2DQ5VT03 806 aaPredicted RBP17.44■□□□□ 0.38
APOB-202ENST00000399256 GGNBP2Q9H3C7 697 aa17.44■□□□□ 0.38
APOB-202ENST00000399256 C1orf115Q9H7X2 142 aa17.44■□□□□ 0.38
APOB-202ENST00000399256 PPP6R1Q9UPN7 881 aa17.44■□□□□ 0.38
APOB-202ENST00000399256 BMP2KLQ5H9B9 411 aa17.43■□□□□ 0.38
APOB-202ENST00000399256 ZMYND15Q9H091 742 aa17.43■□□□□ 0.38
APOB-202ENST00000399256 ABCC11Q96J66 1382 aa17.43■□□□□ 0.38
APOB-202ENST00000399256 K7ELQ4 463 aaPredicted RBP17.43■□□□□ 0.38
APOB-202ENST00000399256 EVC2Q86UK5 1308 aa17.43■□□□□ 0.38
APOB-202ENST00000399256 ADGRB1O14514 1584 aa17.43■□□□□ 0.38
APOB-202ENST00000399256 GAS2L2Q8NHY3 880 aa17.42■□□□□ 0.38
APOB-202ENST00000399256 ADGRB3O60242 1522 aa17.42■□□□□ 0.38
APOB-202ENST00000399256 PREX1Q8TCU6 1659 aa17.42■□□□□ 0.38
APOB-202ENST00000399256 NSD2O96028 1365 aa17.42■□□□□ 0.38
APOB-202ENST00000399256 PIK3C2BO00750 1634 aa17.41■□□□□ 0.38
APOB-202ENST00000399256 TBC1D9Q6ZT07 1266 aa17.41■□□□□ 0.38
APOB-202ENST00000399256 SENP3Q9H4L4 574 aaPredicted RBP17.41■□□□□ 0.38
APOB-202ENST00000399256 NASPP49321 788 aaPredicted RBP17.41■□□□□ 0.38
APOB-202ENST00000399256 MLECQ14165 292 aa17.41■□□□□ 0.38
APOB-202ENST00000399256 PTMSP20962 102 aa17.4■□□□□ 0.38
APOB-202ENST00000399256 TULP4Q9NRJ4 1543 aa17.4■□□□□ 0.38
APOB-202ENST00000399256 CCDC173Q0VFZ6 552 aa17.39■□□□□ 0.37
APOB-202ENST00000399256 IL16Q14005 1332 aa17.39■□□□□ 0.37
APOB-202ENST00000399256 DDX49Q9Y6V7 483 aaKnown RBP17.39■□□□□ 0.37
APOB-202ENST00000399256 PPIP5K1Q6PFW1 1433 aa17.39■□□□□ 0.37
APOB-202ENST00000399256 GOLGA6L22H0YM25 854 aa17.38■□□□□ 0.37
APOB-202ENST00000399256 TPM2P07951 284 aa17.38■□□□□ 0.37
APOB-202ENST00000399256 KIAA1211Q6ZU35 1233 aa17.38■□□□□ 0.37
APOB-202ENST00000399256 A0A1W2PP64 1363 aa17.37■□□□□ 0.37
APOB-202ENST00000399256 COL3A1P02461 1466 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms