RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 PPP4R3CPQ6ZMV5 832 aa17.29■□□□□ 0.36
HLA-DQB1-203ENST00000399082 SBNO1A3KN83 1393 aa17.28■□□□□ 0.36
HLA-DQB1-203ENST00000399082 SHPRHQ149N8 1683 aa17.28■□□□□ 0.36
HLA-DQB1-203ENST00000399082 TNS3Q68CZ2 1445 aa17.28■□□□□ 0.36
HLA-DQB1-203ENST00000399082 ANKRD36BQ8N2N9 1353 aa17.28■□□□□ 0.36
HLA-DQB1-203ENST00000399082 SPATA31A3Q5VYP0 1347 aa17.27■□□□□ 0.36
HLA-DQB1-203ENST00000399082 PSME1Q06323 249 aa17.27■□□□□ 0.36
HLA-DQB1-203ENST00000399082 POLR3GLQ9BT43 218 aa17.27■□□□□ 0.36
HLA-DQB1-203ENST00000399082 COL22A1Q8NFW1 1626 aaPredicted RBP17.27■□□□□ 0.36
HLA-DQB1-203ENST00000399082 PNPLA6Q8IY17 1366 aa17.27■□□□□ 0.35
HLA-DQB1-203ENST00000399082 PIK3C2AO00443 1686 aa17.26■□□□□ 0.35
HLA-DQB1-203ENST00000399082 KTN1Q86UP2 1357 aaKnown RBP17.26■□□□□ 0.35
HLA-DQB1-203ENST00000399082 MARF1Q9Y4F3 1742 aaKnown RBP17.25■□□□□ 0.35
HLA-DQB1-203ENST00000399082 CRYBG1Q9Y4K1 1723 aa17.25■□□□□ 0.35
HLA-DQB1-203ENST00000399082 LRRC59Q96AG4 307 aaKnown RBP17.24■□□□□ 0.35
HLA-DQB1-203ENST00000399082 CARD14Q9BXL6 1004 aa17.24■□□□□ 0.35
HLA-DQB1-203ENST00000399082 BRD4O60885 1362 aaPredicted RBP17.24■□□□□ 0.35
HLA-DQB1-203ENST00000399082 ABCA3Q99758 1704 aa17.24■□□□□ 0.35
HLA-DQB1-203ENST00000399082 MED1Q15648 1581 aaPredicted RBP17.23■□□□□ 0.35
HLA-DQB1-203ENST00000399082 EDC4Q6P2E9 1401 aaKnown RBP17.23■□□□□ 0.35
HLA-DQB1-203ENST00000399082 HOXD11P31277 338 aaPredicted RBP17.23■□□□□ 0.35
HLA-DQB1-203ENST00000399082 ZNF692Q9BU19 519 aaPredicted RBP17.23■□□□□ 0.35
HLA-DQB1-203ENST00000399082 TERF2IPQ9NYB0 399 aa17.23■□□□□ 0.35
HLA-DQB1-203ENST00000399082 JCADQ9P266 1359 aa17.23■□□□□ 0.35
HLA-DQB1-203ENST00000399082 TTC21BQ7Z4L5 1316 aa17.22■□□□□ 0.35
HLA-DQB1-203ENST00000399082 HDGFL2Q7Z4V5 671 aaPredicted RBP17.22■□□□□ 0.35
HLA-DQB1-203ENST00000399082 USP54Q70EL1 1684 aa17.21■□□□□ 0.35
HLA-DQB1-203ENST00000399082 NSD3Q9BZ95 1437 aa17.21■□□□□ 0.34
HLA-DQB1-203ENST00000399082 LRP6O75581 1613 aa17.2■□□□□ 0.34
HLA-DQB1-203ENST00000399082 ARHGEF10O15013 1369 aa17.19■□□□□ 0.34
HLA-DQB1-203ENST00000399082 PHRF1Q9P1Y6 1649 aaKnown RBP17.19■□□□□ 0.34
HLA-DQB1-203ENST00000399082 PAK3O75914 559 aaPredicted RBP17.19■□□□□ 0.34
HLA-DQB1-203ENST00000399082 PANK3Q9H999 370 aa17.19■□□□□ 0.34
HLA-DQB1-203ENST00000399082 TTC21AQ8NDW8 1320 aa17.19■□□□□ 0.34
HLA-DQB1-203ENST00000399082 ZRANB1Q9UGI0 708 aa17.18■□□□□ 0.34
HLA-DQB1-203ENST00000399082 KIF20BQ96Q89 1820 aa17.17■□□□□ 0.34
HLA-DQB1-203ENST00000399082 DCAF8L1A6NGE4 600 aa17.17■□□□□ 0.34
HLA-DQB1-203ENST00000399082 NUTM2GQ5VZR2 741 aa17.17■□□□□ 0.34
HLA-DQB1-203ENST00000399082 NME9Q86XW9 330 aa17.17■□□□□ 0.34
HLA-DQB1-203ENST00000399082 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.17■□□□□ 0.34
HLA-DQB1-203ENST00000399082 USP19O94966 1318 aa17.17■□□□□ 0.34
HLA-DQB1-203ENST00000399082 SLIT3O75094 1523 aa17.16■□□□□ 0.34
HLA-DQB1-203ENST00000399082 USP31Q70CQ4 1352 aa17.16■□□□□ 0.34
HLA-DQB1-203ENST00000399082 OVOS2A0A0J9YW53 1432 aa17.16■□□□□ 0.34
HLA-DQB1-203ENST00000399082 OVOS2Q6IE36 1432 aa17.16■□□□□ 0.34
HLA-DQB1-203ENST00000399082 LMOD2Q6P5Q4 547 aa17.15■□□□□ 0.34
HLA-DQB1-203ENST00000399082 ABTB2Q8N961 1025 aa17.15■□□□□ 0.34
HLA-DQB1-203ENST00000399082 CABLES1Q8TDN4 633 aa17.15■□□□□ 0.34
HLA-DQB1-203ENST00000399082 PER1O15534 1290 aaPredicted RBP17.14■□□□□ 0.33
HLA-DQB1-203ENST00000399082 SPATA31A6Q5VVP1 1343 aa17.14■□□□□ 0.33
HLA-DQB1-203ENST00000399082 ZNF316A6NFI3 1004 aaPredicted RBP17.13■□□□□ 0.33
HLA-DQB1-203ENST00000399082 FYB1O15117 783 aa17.13■□□□□ 0.33
HLA-DQB1-203ENST00000399082 NFAT5O94916 1531 aa17.12■□□□□ 0.33
HLA-DQB1-203ENST00000399082 PLEKHG5O94827 1062 aa17.12■□□□□ 0.33
HLA-DQB1-203ENST00000399082 NLRP6P59044 892 aa17.12■□□□□ 0.33
HLA-DQB1-203ENST00000399082 ANKRD26Q9UPS8 1709 aa17.12■□□□□ 0.33
HLA-DQB1-203ENST00000399082 AMER1Q5JTC6 1135 aaPredicted RBP17.1■□□□□ 0.33
HLA-DQB1-203ENST00000399082 NLRP13Q86W25 1043 aa17.1■□□□□ 0.33
HLA-DQB1-203ENST00000399082 GGNBP2Q9H3C7 697 aa17.1■□□□□ 0.33
HLA-DQB1-203ENST00000399082 NUTM2BA6NNL0 878 aaPredicted RBP17.09■□□□□ 0.33
HLA-DQB1-203ENST00000399082 NUTM2EB1AL46 878 aaPredicted RBP17.09■□□□□ 0.33
HLA-DQB1-203ENST00000399082 NUTM2AQ8IVF1 878 aaPredicted RBP17.09■□□□□ 0.33
HLA-DQB1-203ENST00000399082 CGNL1Q0VF96 1302 aa17.07■□□□□ 0.32
HLA-DQB1-203ENST00000399082 GCP02774 474 aa17.07■□□□□ 0.32
HLA-DQB1-203ENST00000399082 DDX10Q13206 875 aaKnown RBP17.07■□□□□ 0.32
HLA-DQB1-203ENST00000399082 RNF39Q9H2S5 420 aa17.06■□□□□ 0.32
HLA-DQB1-203ENST00000399082 COL18A1P39060 1754 aa17.05■□□□□ 0.32
HLA-DQB1-203ENST00000399082 CPDO75976 1380 aa17.05■□□□□ 0.32
HLA-DQB1-203ENST00000399082 ADAMTS2O95450 1211 aa17.05■□□□□ 0.32
HLA-DQB1-203ENST00000399082 KNSTRNQ9Y448 316 aa17.05■□□□□ 0.32
HLA-DQB1-203ENST00000399082 NSD2O96028 1365 aa17.04■□□□□ 0.32
HLA-DQB1-203ENST00000399082 KIAA0232Q92628 1395 aa17.04■□□□□ 0.32
HLA-DQB1-203ENST00000399082 NPC1L1Q9UHC9 1359 aa17.04■□□□□ 0.32
HLA-DQB1-203ENST00000399082 PLCH1Q4KWH8 1693 aa17.04■□□□□ 0.32
HLA-DQB1-203ENST00000399082 LMO7Q8WWI1 1683 aa17.04■□□□□ 0.32
HLA-DQB1-203ENST00000399082 COG3Q96JB2 828 aa17.04■□□□□ 0.32
HLA-DQB1-203ENST00000399082 LTN1O94822 1766 aa17.03■□□□□ 0.32
HLA-DQB1-203ENST00000399082 FBLN1P23142 703 aa17.03■□□□□ 0.32
HLA-DQB1-203ENST00000399082 ZC3H6P61129 1189 aaKnown RBP17.03■□□□□ 0.32
HLA-DQB1-203ENST00000399082 COL14A1Q05707 1796 aaKnown RBP17.02■□□□□ 0.32
HLA-DQB1-203ENST00000399082 FAM83GA6ND36 823 aa17.02■□□□□ 0.32
HLA-DQB1-203ENST00000399082 SOX12O15370 315 aa17.02■□□□□ 0.32
HLA-DQB1-203ENST00000399082 CNKSR2Q8WXI2 1034 aa17.02■□□□□ 0.32
HLA-DQB1-203ENST00000399082 SLIT2O94813 1529 aa17.01■□□□□ 0.31
HLA-DQB1-203ENST00000399082 HAP1P54257 671 aaPredicted RBP17.01■□□□□ 0.31
HLA-DQB1-203ENST00000399082 ARHGEF25Q86VW2 580 aa17.01■□□□□ 0.31
HLA-DQB1-203ENST00000399082 KCNH5Q8NCM2 988 aa17.01■□□□□ 0.31
HLA-DQB1-203ENST00000399082 NRAPQ86VF7 1730 aa17.01■□□□□ 0.31
HLA-DQB1-203ENST00000399082 PEAK1Q9H792 1746 aa17.01■□□□□ 0.31
HLA-DQB1-203ENST00000399082 CHRNA2Q15822 529 aa17■□□□□ 0.31
HLA-DQB1-203ENST00000399082 CAMTA1Q9Y6Y1 1673 aa17■□□□□ 0.31
HLA-DQB1-203ENST00000399082 NWD2Q9ULI1 1742 aa16.99■□□□□ 0.31
HLA-DQB1-203ENST00000399082 C8orf37Q96NL8 207 aa16.99■□□□□ 0.31
HLA-DQB1-203ENST00000399082 RGPD5Q99666 1765 aa16.99■□□□□ 0.31
HLA-DQB1-203ENST00000399082 BCL9LQ86UU0 1499 aa16.99■□□□□ 0.31
HLA-DQB1-203ENST00000399082 MAP3K19Q56UN5 1328 aa16.98■□□□□ 0.31
HLA-DQB1-203ENST00000399082 ABCC6O95255 1503 aa16.98■□□□□ 0.31
HLA-DQB1-203ENST00000399082 CC2D1BQ5T0F9 858 aaKnown RBP16.98■□□□□ 0.31
HLA-DQB1-203ENST00000399082 PRDM11Q9NQV5 511 aa16.98■□□□□ 0.31
HLA-DQB1-203ENST00000399082 AATKQ6ZMQ8 1374 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms