RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 PLEKHF1Q96S99 279 aa14.63□□□□□ -0.07
C4orf3-201ENST00000399075 SPATA31D1Q6ZQQ2 1576 aa14.63□□□□□ -0.07
C4orf3-201ENST00000399075 PNPLA6Q8IY17 1366 aa14.62□□□□□ -0.07
C4orf3-201ENST00000399075 SETD1AO15047 1707 aaKnown RBP14.62□□□□□ -0.07
C4orf3-201ENST00000399075 SAFB2Q14151 953 aaKnown RBP eCLIP14.62□□□□□ -0.07
C4orf3-201ENST00000399075 IL16Q14005 1332 aa14.62□□□□□ -0.07
C4orf3-201ENST00000399075 FYB1O15117 783 aa14.61□□□□□ -0.07
C4orf3-201ENST00000399075 FRAT1Q92837 279 aaPredicted RBP14.61□□□□□ -0.07
C4orf3-201ENST00000399075 POGKQ9P215 609 aa14.61□□□□□ -0.07
C4orf3-201ENST00000399075 ATP7BP35670 1465 aa14.6□□□□□ -0.07
C4orf3-201ENST00000399075 MINK1Q8N4C8 1332 aaPredicted RBP14.6□□□□□ -0.07
C4orf3-201ENST00000399075 HDGFL2Q7Z4V5 671 aaPredicted RBP14.6□□□□□ -0.07
C4orf3-201ENST00000399075 GGNBP2Q9H3C7 697 aa14.6□□□□□ -0.07
C4orf3-201ENST00000399075 A2ML1A8K2U0 1454 aa14.6□□□□□ -0.07
C4orf3-201ENST00000399075 LAS1LQ9Y4W2 734 aaKnown RBP14.59□□□□□ -0.07
C4orf3-201ENST00000399075 RLBP1P12271 317 aa14.59□□□□□ -0.07
C4orf3-201ENST00000399075 FBXO31Q5XUX0 539 aaPredicted RBP14.59□□□□□ -0.07
C4orf3-201ENST00000399075 PNNQ9H307 717 aaKnown RBP14.59□□□□□ -0.07
C4orf3-201ENST00000399075 NEFMP07197 916 aa14.58□□□□□ -0.07
C4orf3-201ENST00000399075 TMPOP42166 694 aaKnown RBP14.58□□□□□ -0.07
C4orf3-201ENST00000399075 RIMBP3CA6NJZ7 1639 aa14.58□□□□□ -0.07
C4orf3-201ENST00000399075 RIMBP3BA6NNM3 1639 aa14.58□□□□□ -0.07
C4orf3-201ENST00000399075 RIMBP3Q9UFD9 1639 aa14.58□□□□□ -0.07
C4orf3-201ENST00000399075 ZKSCAN2Q63HK3 967 aa14.57□□□□□ -0.08
C4orf3-201ENST00000399075 CDK19Q9BWU1 502 aa14.57□□□□□ -0.08
C4orf3-201ENST00000399075 TRIM35Q9UPQ4 493 aa14.57□□□□□ -0.08
C4orf3-201ENST00000399075 MVPQ14764 893 aaKnown RBP14.57□□□□□ -0.08
C4orf3-201ENST00000399075 A0A0U1RQG5 324 aaPredicted RBP14.56□□□□□ -0.08
C4orf3-201ENST00000399075 PCDHB15Q9Y5E8 787 aa14.56□□□□□ -0.08
C4orf3-201ENST00000399075 U2SURPO15042 1029 aaKnown RBP14.56□□□□□ -0.08
C4orf3-201ENST00000399075 RWDD1Q9H446 243 aaPredicted RBP14.56□□□□□ -0.08
C4orf3-201ENST00000399075 RIMS2Q9UQ26 1411 aa14.56□□□□□ -0.08
C4orf3-201ENST00000399075 DIAPH1O60610 1272 aaKnown RBP14.55□□□□□ -0.08
C4orf3-201ENST00000399075 BCL2L13Q9BXK5 485 aa14.55□□□□□ -0.08
C4orf3-201ENST00000399075 STAG3Q9UJ98 1225 aa14.55□□□□□ -0.08
C4orf3-201ENST00000399075 FAM69CQ0P6D2 419 aa14.54□□□□□ -0.08
C4orf3-201ENST00000399075 DZIP1LQ8IYY4 767 aaKnown RBP14.54□□□□□ -0.08
C4orf3-201ENST00000399075 TNNQ9UQP3 1299 aa14.54□□□□□ -0.08
C4orf3-201ENST00000399075 USP19O94966 1318 aa14.54□□□□□ -0.08
C4orf3-201ENST00000399075 LRRC7Q96NW7 1537 aa14.54□□□□□ -0.08
C4orf3-201ENST00000399075 NRXN3Q9Y4C0 1643 aa14.54□□□□□ -0.08
C4orf3-201ENST00000399075 CABP1Q9NZU7 370 aa14.53□□□□□ -0.08
C4orf3-201ENST00000399075 KNDC1Q76NI1 1749 aa14.53□□□□□ -0.08
C4orf3-201ENST00000399075 FCHSD2O94868 740 aa14.53□□□□□ -0.08
C4orf3-201ENST00000399075 FAM135BQ49AJ0 1406 aa14.53□□□□□ -0.08
C4orf3-201ENST00000399075 EXOSC9Q06265 439 aaKnown RBP14.52□□□□□ -0.08
C4orf3-201ENST00000399075 CYB5RLQ6IPT4 315 aa14.52□□□□□ -0.08
C4orf3-201ENST00000399075 TSR2Q969E8 191 aaKnown RBP14.52□□□□□ -0.08
C4orf3-201ENST00000399075 FTSJ3Q8IY81 847 aaKnown RBP14.52□□□□□ -0.09
C4orf3-201ENST00000399075 PPIP5K1Q6PFW1 1433 aa14.52□□□□□ -0.09
C4orf3-201ENST00000399075 TSPOAP1O95153 1857 aa14.52□□□□□ -0.09
C4orf3-201ENST00000399075 SMC4Q9NTJ3 1288 aa14.52□□□□□ -0.09
C4orf3-201ENST00000399075 CPSF1Q10570 1443 aaKnown RBP14.51□□□□□ -0.09
C4orf3-201ENST00000399075 EDC4Q6P2E9 1401 aaKnown RBP14.51□□□□□ -0.09
C4orf3-201ENST00000399075 RIPK4P57078 832 aa14.51□□□□□ -0.09
C4orf3-201ENST00000399075 PDZRN3Q9UPQ7 1066 aa14.51□□□□□ -0.09
C4orf3-201ENST00000399075 ATF7IPQ6VMQ6 1270 aa14.5□□□□□ -0.09
C4orf3-201ENST00000399075 SSH1Q8WYL5 1049 aa14.5□□□□□ -0.09
C4orf3-201ENST00000399075 DDX19BQ9UMR2 479 aa14.5□□□□□ -0.09
C4orf3-201ENST00000399075 KIF16BQ96L93 1317 aa14.5□□□□□ -0.09
C4orf3-201ENST00000399075 TRIM27P14373 513 aa14.49□□□□□ -0.09
C4orf3-201ENST00000399075 HDAC1Q13547 482 aaPredicted RBP14.49□□□□□ -0.09
C4orf3-201ENST00000399075 ZNF428Q96B54 188 aa14.49□□□□□ -0.09
C4orf3-201ENST00000399075 CDK12Q9NYV4 1490 aaPredicted RBP14.49□□□□□ -0.09
C4orf3-201ENST00000399075 TECPR2O15040 1411 aa14.49□□□□□ -0.09
C4orf3-201ENST00000399075 SLC4A3P48751 1232 aa14.49□□□□□ -0.09
C4orf3-201ENST00000399075 ALDH1L2Q3SY69 923 aa14.49□□□□□ -0.09
C4orf3-201ENST00000399075 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.49□□□□□ -0.09
C4orf3-201ENST00000399075 MON2Q7Z3U7 1717 aa14.49□□□□□ -0.09
C4orf3-201ENST00000399075 NFKBIBQ15653 356 aa14.49□□□□□ -0.09
C4orf3-201ENST00000399075 RSPH6AQ9H0K4 717 aa14.49□□□□□ -0.09
C4orf3-201ENST00000399075 POLKQ9UBT6 870 aa14.49□□□□□ -0.09
C4orf3-201ENST00000399075 MAP2P11137 1827 aaKnown RBP14.48□□□□□ -0.09
C4orf3-201ENST00000399075 SIRT1Q96EB6 747 aa14.48□□□□□ -0.09
C4orf3-201ENST00000399075 SENP3Q9H4L4 574 aaPredicted RBP14.48□□□□□ -0.09
C4orf3-201ENST00000399075 AATKQ6ZMQ8 1374 aa14.48□□□□□ -0.09
C4orf3-201ENST00000399075 BRPF1P55201 1214 aaPredicted RBP14.48□□□□□ -0.09
C4orf3-201ENST00000399075 CPS1P31327 1500 aa14.48□□□□□ -0.09
C4orf3-201ENST00000399075 IPO8O15397 1037 aaKnown RBP14.47□□□□□ -0.09
C4orf3-201ENST00000399075 WAPLQ7Z5K2 1190 aa14.46□□□□□ -0.09
C4orf3-201ENST00000399075 WASLO00401 505 aaPredicted RBP14.46□□□□□ -0.09
C4orf3-201ENST00000399075 SEC24BO95487 1268 aa14.46□□□□□ -0.09
C4orf3-201ENST00000399075 ZMYND15Q9H091 742 aa14.46□□□□□ -0.09
C4orf3-201ENST00000399075 AKAP12Q02952 1782 aa14.46□□□□□ -0.1
C4orf3-201ENST00000399075 CALD1Q05682 793 aaKnown RBP14.46□□□□□ -0.1
C4orf3-201ENST00000399075 BECN1Q14457 450 aa14.46□□□□□ -0.1
C4orf3-201ENST00000399075 UPF2Q9HAU5 1272 aaKnown RBP14.46□□□□□ -0.1
C4orf3-201ENST00000399075 PRKAR2BP31323 418 aa14.45□□□□□ -0.1
C4orf3-201ENST00000399075 TBC1D32Q96NH3 1257 aa14.45□□□□□ -0.1
C4orf3-201ENST00000399075 NOB1Q9ULX3 412 aaKnown RBP14.45□□□□□ -0.1
C4orf3-201ENST00000399075 NFE2L2Q16236 605 aa14.44□□□□□ -0.1
C4orf3-201ENST00000399075 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.44□□□□□ -0.1
C4orf3-201ENST00000399075 C3P01024 1663 aa14.44□□□□□ -0.1
C4orf3-201ENST00000399075 ITPRIPQ8IWB1 547 aa14.44□□□□□ -0.1
C4orf3-201ENST00000399075 VSIG10Q8N0Z9 540 aa14.44□□□□□ -0.1
C4orf3-201ENST00000399075 ITSN1Q15811 1721 aa14.44□□□□□ -0.1
C4orf3-201ENST00000399075 METP08581 1390 aa14.44□□□□□ -0.1
C4orf3-201ENST00000399075 SMC5Q8IY18 1101 aa14.43□□□□□ -0.1
C4orf3-201ENST00000399075 ZBTB40Q9NUA8 1239 aa14.43□□□□□ -0.1
C4orf3-201ENST00000399075 IL13P35225 146 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms