RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 KTN1Q86UP2 1357 aaKnown RBP24.11■■□□□ 1.45
CSNK1D-204ENST00000398519 PNPLA6Q8IY17 1366 aa24.11■■□□□ 1.45
CSNK1D-204ENST00000398519 TERF2IPQ9NYB0 399 aa24.11■■□□□ 1.45
CSNK1D-204ENST00000398519 ANKRD36BQ8N2N9 1353 aa24.1■■□□□ 1.45
CSNK1D-204ENST00000398519 HDGFL2Q7Z4V5 671 aaPredicted RBP24.1■■□□□ 1.45
CSNK1D-204ENST00000398519 CCDC7Q96M83 1385 aa24.1■■□□□ 1.45
CSNK1D-204ENST00000398519 WASHC2AQ641Q2 1341 aa24.09■■□□□ 1.45
CSNK1D-204ENST00000398519 BRD4O60885 1362 aaPredicted RBP24.09■■□□□ 1.45
CSNK1D-204ENST00000398519 COL22A1Q8NFW1 1626 aaPredicted RBP24.09■■□□□ 1.45
CSNK1D-204ENST00000398519 PAK3O75914 559 aaPredicted RBP24.08■■□□□ 1.45
CSNK1D-204ENST00000398519 ARHGEF10O15013 1369 aa24.06■■□□□ 1.44
CSNK1D-204ENST00000398519 EDC4Q6P2E9 1401 aaKnown RBP24.05■■□□□ 1.44
CSNK1D-204ENST00000398519 LMOD2Q6P5Q4 547 aa24.04■■□□□ 1.44
CSNK1D-204ENST00000398519 TTC21BQ7Z4L5 1316 aa24.04■■□□□ 1.44
CSNK1D-204ENST00000398519 PIK3C2AO00443 1686 aa24.04■■□□□ 1.44
CSNK1D-204ENST00000398519 SPATA31A6Q5VVP1 1343 aa24.02■■□□□ 1.44
CSNK1D-204ENST00000398519 MED1Q15648 1581 aaPredicted RBP24.01■■□□□ 1.43
CSNK1D-204ENST00000398519 TTC21AQ8NDW8 1320 aa24.01■■□□□ 1.43
CSNK1D-204ENST00000398519 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24■■□□□ 1.432e-7■■□□□ 13.2
CSNK1D-204ENST00000398519 ABTB2Q8N961 1025 aa24■■□□□ 1.43
CSNK1D-204ENST00000398519 CARD14Q9BXL6 1004 aa24■■□□□ 1.43
CSNK1D-204ENST00000398519 ABCA3Q99758 1704 aa24■■□□□ 1.43
CSNK1D-204ENST00000398519 CRYBG1Q9Y4K1 1723 aa24■■□□□ 1.43
CSNK1D-204ENST00000398519 LRP6O75581 1613 aa23.99■■□□□ 1.43
CSNK1D-204ENST00000398519 NUTM2GQ5VZR2 741 aa23.99■■□□□ 1.43
CSNK1D-204ENST00000398519 PANK3Q9H999 370 aa23.99■■□□□ 1.43
CSNK1D-204ENST00000398519 NSD3Q9BZ95 1437 aa23.98■■□□□ 1.43
CSNK1D-204ENST00000398519 CABLES1Q8TDN4 633 aa23.97■■□□□ 1.43
CSNK1D-204ENST00000398519 MARF1Q9Y4F3 1742 aaKnown RBP23.96■■□□□ 1.43
CSNK1D-204ENST00000398519 PLEKHG5O94827 1062 aa23.96■■□□□ 1.43
CSNK1D-204ENST00000398519 PHRF1Q9P1Y6 1649 aaKnown RBP23.96■■□□□ 1.43
CSNK1D-204ENST00000398519 NUTM2BA6NNL0 878 aaPredicted RBP23.95■■□□□ 1.43
CSNK1D-204ENST00000398519 NUTM2EB1AL46 878 aaPredicted RBP23.95■■□□□ 1.43
CSNK1D-204ENST00000398519 NME9Q86XW9 330 aa23.95■■□□□ 1.43
CSNK1D-204ENST00000398519 NUTM2AQ8IVF1 878 aaPredicted RBP23.95■■□□□ 1.43
CSNK1D-204ENST00000398519 USP54Q70EL1 1684 aa23.95■■□□□ 1.42
CSNK1D-204ENST00000398519 USP19O94966 1318 aa23.94■■□□□ 1.42
CSNK1D-204ENST00000398519 NLRP6P59044 892 aa23.94■■□□□ 1.42
CSNK1D-204ENST00000398519 NLRP13Q86W25 1043 aa23.93■■□□□ 1.42
CSNK1D-204ENST00000398519 ZRANB1Q9UGI0 708 aa23.93■■□□□ 1.42
CSNK1D-204ENST00000398519 USP31Q70CQ4 1352 aa23.92■■□□□ 1.42
CSNK1D-204ENST00000398519 KIF20BQ96Q89 1820 aa23.92■■□□□ 1.42
CSNK1D-204ENST00000398519 SLIT3O75094 1523 aa23.91■■□□□ 1.42
CSNK1D-204ENST00000398519 OVOS2A0A0J9YW53 1432 aa23.9■■□□□ 1.42
CSNK1D-204ENST00000398519 OVOS2Q6IE36 1432 aa23.9■■□□□ 1.42
CSNK1D-204ENST00000398519 FYB1O15117 783 aa23.9■■□□□ 1.42
CSNK1D-204ENST00000398519 ADAMTS2O95450 1211 aa23.88■■□□□ 1.41
CSNK1D-204ENST00000398519 HAP1P54257 671 aaPredicted RBP23.88■■□□□ 1.41
CSNK1D-204ENST00000398519 CGNL1Q0VF96 1302 aa23.87■■□□□ 1.41
CSNK1D-204ENST00000398519 GGNBP2Q9H3C7 697 aa23.86■■□□□ 1.41
CSNK1D-204ENST00000398519 PER1O15534 1290 aaPredicted RBP23.86■■□□□ 1.41
CSNK1D-204ENST00000398519 GCP02774 474 aa23.86■■□□□ 1.41
CSNK1D-204ENST00000398519 ZNF316A6NFI3 1004 aaPredicted RBP23.85■■□□□ 1.41
CSNK1D-204ENST00000398519 MEX3CQ5U5Q3 659 aaKnown RBP23.84■■□□□ 1.41
CSNK1D-204ENST00000398519 KNSTRNQ9Y448 316 aa23.84■■□□□ 1.41
CSNK1D-204ENST00000398519 NFAT5O94916 1531 aa23.84■■□□□ 1.41
CSNK1D-204ENST00000398519 COG3Q96JB2 828 aa23.83■■□□□ 1.41
CSNK1D-204ENST00000398519 ANKRD26Q9UPS8 1709 aa23.82■■□□□ 1.4
CSNK1D-204ENST00000398519 C8orf37Q96NL8 207 aa23.82■■□□□ 1.4
CSNK1D-204ENST00000398519 KIAA0232Q92628 1395 aa23.81■■□□□ 1.4
CSNK1D-204ENST00000398519 SOX12O15370 315 aa23.81■■□□□ 1.4
CSNK1D-204ENST00000398519 ZC3H6P61129 1189 aaKnown RBP23.81■■□□□ 1.4
CSNK1D-204ENST00000398519 KCNH5Q8NCM2 988 aa23.81■■□□□ 1.4
CSNK1D-204ENST00000398519 CPDO75976 1380 aa23.8■■□□□ 1.4
CSNK1D-204ENST00000398519 AMER1Q5JTC6 1135 aaPredicted RBP23.8■■□□□ 1.4
CSNK1D-204ENST00000398519 NSD2O96028 1365 aa23.8■■□□□ 1.4
CSNK1D-204ENST00000398519 DDX10Q13206 875 aaKnown RBP23.78■■□□□ 1.4
CSNK1D-204ENST00000398519 COL14A1Q05707 1796 aaKnown RBP23.78■■□□□ 1.4
CSNK1D-204ENST00000398519 FAM83GA6ND36 823 aa23.78■■□□□ 1.4
CSNK1D-204ENST00000398519 PLCH1Q4KWH8 1693 aa23.77■■□□□ 1.4
CSNK1D-204ENST00000398519 NGLY1Q96IV0 654 aa23.77■■□□□ 1.4
CSNK1D-204ENST00000398519 PRDM11Q9NQV5 511 aa23.77■■□□□ 1.4
CSNK1D-204ENST00000398519 SLIT2O94813 1529 aa23.75■■□□□ 1.39
CSNK1D-204ENST00000398519 CHRNA2Q15822 529 aa23.74■■□□□ 1.39
CSNK1D-204ENST00000398519 ARHGEF25Q86VW2 580 aa23.74■■□□□ 1.39
CSNK1D-204ENST00000398519 AFF2P51816 1311 aa23.74■■□□□ 1.39
CSNK1D-204ENST00000398519 LMO7Q8WWI1 1683 aa23.74■■□□□ 1.39
CSNK1D-204ENST00000398519 LTN1O94822 1766 aa23.74■■□□□ 1.39
CSNK1D-204ENST00000398519 NPC1L1Q9UHC9 1359 aa23.74■■□□□ 1.39
CSNK1D-204ENST00000398519 FBLN1P23142 703 aa23.74■■□□□ 1.39
CSNK1D-204ENST00000398519 FNBP4Q8N3X1 1017 aaPredicted RBP23.74■■□□□ 1.39
CSNK1D-204ENST00000398519 COL18A1P39060 1754 aa23.72■■□□□ 1.39
CSNK1D-204ENST00000398519 NWD2Q9ULI1 1742 aa23.72■■□□□ 1.39
CSNK1D-204ENST00000398519 ZBTB7CA1YPR0 619 aa23.72■■□□□ 1.39
CSNK1D-204ENST00000398519 CC2D1BQ5T0F9 858 aaKnown RBP23.72■■□□□ 1.39
CSNK1D-204ENST00000398519 BCL9LQ86UU0 1499 aa23.71■■□□□ 1.39
CSNK1D-204ENST00000398519 PHF23Q9BUL5 403 aaPredicted RBP23.71■■□□□ 1.39
CSNK1D-204ENST00000398519 AATKQ6ZMQ8 1374 aa23.71■■□□□ 1.39
CSNK1D-204ENST00000398519 RGS17Q9UGC6 210 aaPredicted RBP23.7■■□□□ 1.38
CSNK1D-204ENST00000398519 NRAPQ86VF7 1730 aa23.7■■□□□ 1.38
CSNK1D-204ENST00000398519 MORC1Q86VD1 984 aa23.69■■□□□ 1.38
CSNK1D-204ENST00000398519 BTG4Q9NY30 223 aa23.69■■□□□ 1.38
CSNK1D-204ENST00000398519 CAMTA1Q9Y6Y1 1673 aa23.69■■□□□ 1.38
CSNK1D-204ENST00000398519 MAP3K19Q56UN5 1328 aa23.69■■□□□ 1.38
CSNK1D-204ENST00000398519 ABCC6O95255 1503 aa23.69■■□□□ 1.38
CSNK1D-204ENST00000398519 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.69■■□□□ 1.38
CSNK1D-204ENST00000398519 RRS1Q15050 365 aaKnown RBP23.69■■□□□ 1.38
CSNK1D-204ENST00000398519 USP21Q9UK80 565 aa23.69■■□□□ 1.38
CSNK1D-204ENST00000398519 TNNT2P45379 298 aaPredicted RBP23.68■■□□□ 1.38
CSNK1D-204ENST00000398519 CNGB1Q14028 1251 aaPredicted RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms