RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 GOLGA6L4A6NEF3 574 aa13.63□□□□□ -0.23
CSGALNACT1-202ENST00000397998 TRMT2AQ8IZ69 625 aaKnown RBP13.63□□□□□ -0.23
CSGALNACT1-202ENST00000397998 PRAM1Q96QH2 718 aa13.63□□□□□ -0.23
CSGALNACT1-202ENST00000397998 NEK4P51957 841 aa13.63□□□□□ -0.23
CSGALNACT1-202ENST00000397998 POLR3AO14802 1390 aaPredicted RBP13.63□□□□□ -0.23
CSGALNACT1-202ENST00000397998 HDAC1Q13547 482 aaPredicted RBP13.62□□□□□ -0.23
CSGALNACT1-202ENST00000397998 DRC7Q8IY82 874 aa13.62□□□□□ -0.23
CSGALNACT1-202ENST00000397998 COG3Q96JB2 828 aa13.62□□□□□ -0.23
CSGALNACT1-202ENST00000397998 TBC1D9Q6ZT07 1266 aa13.62□□□□□ -0.23
CSGALNACT1-202ENST00000397998 ZSCAN30Q86W11 494 aa13.62□□□□□ -0.23
CSGALNACT1-202ENST00000397998 CABP1Q9NZU7 370 aa13.62□□□□□ -0.23
CSGALNACT1-202ENST00000397998 LRRIQ1Q96JM4 1722 aa13.61□□□□□ -0.23
CSGALNACT1-202ENST00000397998 NECTIN2Q92692 538 aa13.61□□□□□ -0.23
CSGALNACT1-202ENST00000397998 USP19O94966 1318 aa13.61□□□□□ -0.23
CSGALNACT1-202ENST00000397998 PHF14O94880 888 aa13.6□□□□□ -0.23
CSGALNACT1-202ENST00000397998 BMP2KLQ5H9B9 411 aa13.6□□□□□ -0.23
CSGALNACT1-202ENST00000397998 FBLN1P23142 703 aa13.59□□□□□ -0.23
CSGALNACT1-202ENST00000397998 NUCB1Q02818 461 aa13.59□□□□□ -0.23
CSGALNACT1-202ENST00000397998 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.59□□□□□ -0.23
CSGALNACT1-202ENST00000397998 BAG4O95429 457 aaKnown RBP13.58□□□□□ -0.24
CSGALNACT1-202ENST00000397998 CCDC27Q2M243 656 aa13.58□□□□□ -0.24
CSGALNACT1-202ENST00000397998 SMC5Q8IY18 1101 aa13.58□□□□□ -0.24
CSGALNACT1-202ENST00000397998 NOS1P29475 1434 aa13.58□□□□□ -0.24
CSGALNACT1-202ENST00000397998 CSPP1Q1MSJ5 1256 aa13.58□□□□□ -0.24
CSGALNACT1-202ENST00000397998 NPC1L1Q9UHC9 1359 aa13.57□□□□□ -0.24
CSGALNACT1-202ENST00000397998 ANTXR1Q9H6X2 564 aa13.57□□□□□ -0.24
CSGALNACT1-202ENST00000397998 EIF2AK4Q9P2K8 1649 aaKnown RBP13.57□□□□□ -0.24
CSGALNACT1-202ENST00000397998 FCHSD2O94868 740 aa13.57□□□□□ -0.24
CSGALNACT1-202ENST00000397998 ADGBQ8N7X0 1667 aa13.57□□□□□ -0.24
CSGALNACT1-202ENST00000397998 SMARCA5O60264 1052 aaPredicted RBP13.56□□□□□ -0.24
CSGALNACT1-202ENST00000397998 DCTN1Q14203 1278 aa13.56□□□□□ -0.24
CSGALNACT1-202ENST00000397998 SYCE3A1L190 88 aa13.56□□□□□ -0.24
CSGALNACT1-202ENST00000397998 FGD1P98174 961 aa13.56□□□□□ -0.24
CSGALNACT1-202ENST00000397998 XPCQ01831 940 aaPredicted RBP13.56□□□□□ -0.24
CSGALNACT1-202ENST00000397998 ALDH1L2Q3SY69 923 aa13.56□□□□□ -0.24
CSGALNACT1-202ENST00000397998 GAS2L2Q8NHY3 880 aa13.56□□□□□ -0.24
CSGALNACT1-202ENST00000397998 CHMP3Q9Y3E7 222 aa13.56□□□□□ -0.24
CSGALNACT1-202ENST00000397998 PBRM1Q86U86 1689 aa13.56□□□□□ -0.24
CSGALNACT1-202ENST00000397998 CDK19Q9BWU1 502 aa13.56□□□□□ -0.24
CSGALNACT1-202ENST00000397998 ZBTB40Q9NUA8 1239 aa13.56□□□□□ -0.24
CSGALNACT1-202ENST00000397998 WDR7Q9Y4E6 1490 aa13.55□□□□□ -0.24
CSGALNACT1-202ENST00000397998 TARBP1Q13395 1621 aaKnown RBP13.55□□□□□ -0.24
CSGALNACT1-202ENST00000397998 ZMYND15Q9H091 742 aa13.55□□□□□ -0.24
CSGALNACT1-202ENST00000397998 CCDC39Q9UFE4 941 aa13.55□□□□□ -0.24
CSGALNACT1-202ENST00000397998 TAOK2Q9UL54 1235 aa13.55□□□□□ -0.24
CSGALNACT1-202ENST00000397998 NFE2L2Q16236 605 aa13.55□□□□□ -0.24
CSGALNACT1-202ENST00000397998 SNX21Q969T3 373 aa13.55□□□□□ -0.24
CSGALNACT1-202ENST00000397998 C14orf93Q9H972 538 aaKnown RBP13.55□□□□□ -0.24
CSGALNACT1-202ENST00000397998 CWC22Q9HCG8 908 aaKnown RBP13.55□□□□□ -0.24
CSGALNACT1-202ENST00000397998 TRAPPC8Q9Y2L5 1435 aa13.55□□□□□ -0.24
CSGALNACT1-202ENST00000397998 FKBP5Q13451 457 aaPredicted RBP13.55□□□□□ -0.24
CSGALNACT1-202ENST00000397998 DUOX2Q9NRD8 1548 aa13.54□□□□□ -0.24
CSGALNACT1-202ENST00000397998 MBD3O95983 291 aa13.54□□□□□ -0.24
CSGALNACT1-202ENST00000397998 NAP1L2Q9ULW6 460 aaPredicted RBP13.54□□□□□ -0.24
CSGALNACT1-202ENST00000397998 UQCRHLA0A096LP55 91 aa13.54□□□□□ -0.24
CSGALNACT1-202ENST00000397998 UQCRHP07919 91 aa13.54□□□□□ -0.24
CSGALNACT1-202ENST00000397998 RAB3GAP1Q15042 981 aa13.54□□□□□ -0.24
CSGALNACT1-202ENST00000397998 ZNF428Q96B54 188 aa13.54□□□□□ -0.24
CSGALNACT1-202ENST00000397998 PLA2R1Q13018 1463 aa13.54□□□□□ -0.24
CSGALNACT1-202ENST00000397998 ERC2O15083 957 aa13.54□□□□□ -0.24
CSGALNACT1-202ENST00000397998 KLHL40Q2TBA0 621 aa13.54□□□□□ -0.24
CSGALNACT1-202ENST00000397998 RBM27Q9P2N5 1060 aaKnown RBP13.54□□□□□ -0.24
CSGALNACT1-202ENST00000397998 ABCC11Q96J66 1382 aa13.53□□□□□ -0.24
CSGALNACT1-202ENST00000397998 ZRSR1Q15695 479 aaKnown RBP13.53□□□□□ -0.24
CSGALNACT1-202ENST00000397998 RRS1Q15050 365 aaKnown RBP13.53□□□□□ -0.24
CSGALNACT1-202ENST00000397998 LTV1Q96GA3 475 aaPredicted RBP13.53□□□□□ -0.24
CSGALNACT1-202ENST00000397998 SLC4A2P04920 1241 aa13.52□□□□□ -0.24
CSGALNACT1-202ENST00000397998 KDM5DQ9BY66 1539 aa13.52□□□□□ -0.24
CSGALNACT1-202ENST00000397998 TSPY26PQ9H489 355 aa13.52□□□□□ -0.25
CSGALNACT1-202ENST00000397998 TSPYL4Q9UJ04 414 aa13.52□□□□□ -0.25
CSGALNACT1-202ENST00000397998 ABCC10Q5T3U5 1492 aa13.52□□□□□ -0.25
CSGALNACT1-202ENST00000397998 CEP170Q5SW79 1584 aa13.52□□□□□ -0.25
CSGALNACT1-202ENST00000397998 AMPHP49418 695 aa13.51□□□□□ -0.25
CSGALNACT1-202ENST00000397998 SULT6B1Q6IMI4 303 aa13.51□□□□□ -0.25
CSGALNACT1-202ENST00000397998 EMILIN1Q9Y6C2 1016 aa13.51□□□□□ -0.25
CSGALNACT1-202ENST00000397998 RBM25P49756 843 aaKnown RBP13.5□□□□□ -0.25
CSGALNACT1-202ENST00000397998 MAP7D2Q96T17 732 aa13.5□□□□□ -0.25
CSGALNACT1-202ENST00000397998 FYB1O15117 783 aa13.5□□□□□ -0.25
CSGALNACT1-202ENST00000397998 GAS2L3Q86XJ1 694 aa13.5□□□□□ -0.25
CSGALNACT1-202ENST00000397998 C16orf71Q8IYS4 520 aaPredicted RBP13.5□□□□□ -0.25
CSGALNACT1-202ENST00000397998 TSPYL6Q8N831 410 aa13.5□□□□□ -0.25
CSGALNACT1-202ENST00000397998 VPS37CA5D8V6 355 aaPredicted RBP13.5□□□□□ -0.25
CSGALNACT1-202ENST00000397998 UPF3BQ9BZI7 483 aaKnown RBP13.5□□□□□ -0.25
CSGALNACT1-202ENST00000397998 EXOC6BQ9Y2D4 811 aa13.5□□□□□ -0.25
CSGALNACT1-202ENST00000397998 RPGRIP1LQ68CZ1 1315 aa13.5□□□□□ -0.25
CSGALNACT1-202ENST00000397998 FSD2A1L4K1 749 aa13.49□□□□□ -0.25
CSGALNACT1-202ENST00000397998 ZSCAN23Q3MJ62 389 aa13.49□□□□□ -0.25
CSGALNACT1-202ENST00000397998 FAM83GA6ND36 823 aa13.49□□□□□ -0.25
CSGALNACT1-202ENST00000397998 GOLGA6L6A8MZA4 724 aa13.49□□□□□ -0.25
CSGALNACT1-202ENST00000397998 ATAD2Q6PL18 1390 aa13.49□□□□□ -0.25
CSGALNACT1-202ENST00000397998 IL16Q14005 1332 aa13.49□□□□□ -0.25
CSGALNACT1-202ENST00000397998 PDCL3Q9H2J4 239 aa13.49□□□□□ -0.25
CSGALNACT1-202ENST00000397998 SMC3Q9UQE7 1217 aa13.49□□□□□ -0.25
CSGALNACT1-202ENST00000397998 ATP6V1DQ9Y5K8 247 aa13.49□□□□□ -0.25
CSGALNACT1-202ENST00000397998 PLCH2O75038 1416 aa13.49□□□□□ -0.25
CSGALNACT1-202ENST00000397998 FIBPO43427 364 aa13.48□□□□□ -0.25
CSGALNACT1-202ENST00000397998 RPAP2Q8IXW5 612 aaPredicted RBP13.48□□□□□ -0.25
CSGALNACT1-202ENST00000397998 GDPD2Q9HCC8 539 aa13.48□□□□□ -0.25
CSGALNACT1-202ENST00000397998 MBIPQ9NS73 344 aa13.48□□□□□ -0.25
CSGALNACT1-202ENST00000397998 TRIM35Q9UPQ4 493 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms