RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 HSP90AA1P07900 732 aaKnown RBP10.47□□□□□ -0.73
PTPRD-204ENST00000397606 DIP2CQ9Y2E4 1556 aa10.47□□□□□ -0.73
PTPRD-204ENST00000397606 UBAP1LF5GYI3 381 aa10.46□□□□□ -0.73
PTPRD-204ENST00000397606 FYB1O15117 783 aa10.46□□□□□ -0.73
PTPRD-204ENST00000397606 ZNF530Q6P9A1 599 aaPredicted RBP10.46□□□□□ -0.73
PTPRD-204ENST00000397606 EIF2S2P20042 333 aaKnown RBP10.46□□□□□ -0.73
PTPRD-204ENST00000397606 EMILIN1Q9Y6C2 1016 aa10.46□□□□□ -0.73
PTPRD-204ENST00000397606 BCL2L13Q9BXK5 485 aa10.46□□□□□ -0.74
PTPRD-204ENST00000397606 HMMRO75330 724 aa10.46□□□□□ -0.74
PTPRD-204ENST00000397606 RGS3P49796 1198 aa10.46□□□□□ -0.74
PTPRD-204ENST00000397606 RTL5Q5HYW3 569 aaPredicted RBP10.46□□□□□ -0.74
PTPRD-204ENST00000397606 AGLP35573 1532 aa10.46□□□□□ -0.74
PTPRD-204ENST00000397606 HSP90AB1P08238 724 aaKnown RBP10.45□□□□□ -0.74
PTPRD-204ENST00000397606 AMER1Q5JTC6 1135 aaPredicted RBP10.45□□□□□ -0.74
PTPRD-204ENST00000397606 COL17A1Q9UMD9 1497 aaPredicted RBP10.45□□□□□ -0.74
PTPRD-204ENST00000397606 API5Q9BZZ5 524 aaKnown RBP10.45□□□□□ -0.74
PTPRD-204ENST00000397606 KDM5CP41229 1560 aa10.45□□□□□ -0.74
PTPRD-204ENST00000397606 LMTK2Q8IWU2 1503 aa10.45□□□□□ -0.74
PTPRD-204ENST00000397606 ASXL1Q8IXJ9 1541 aa10.45□□□□□ -0.74
PTPRD-204ENST00000397606 NPHP4O75161 1426 aaPredicted RBP10.45□□□□□ -0.74
PTPRD-204ENST00000397606 DDX58O95786 925 aaKnown RBP10.44□□□□□ -0.74
PTPRD-204ENST00000397606 NEXNQ0ZGT2 675 aa10.44□□□□□ -0.74
PTPRD-204ENST00000397606 CCDC184Q52MB2 194 aa10.44□□□□□ -0.74
PTPRD-204ENST00000397606 WDR63Q8IWG1 891 aa10.44□□□□□ -0.74
PTPRD-204ENST00000397606 KIF16BQ96L93 1317 aa10.44□□□□□ -0.74
PTPRD-204ENST00000397606 KIF1BO60333 1816 aa10.44□□□□□ -0.74
PTPRD-204ENST00000397606 SBNO2Q9Y2G9 1366 aa10.44□□□□□ -0.74
PTPRD-204ENST00000397606 LMTK3Q96Q04 1460 aa10.43□□□□□ -0.74
PTPRD-204ENST00000397606 RRP1P56182 461 aaKnown RBP10.43□□□□□ -0.74
PTPRD-204ENST00000397606 NFE2L2Q16236 605 aa10.43□□□□□ -0.74
PTPRD-204ENST00000397606 PIK3C2GO75747 1445 aa10.43□□□□□ -0.74
PTPRD-204ENST00000397606 ZFYVE9O95405 1425 aa10.43□□□□□ -0.74
PTPRD-204ENST00000397606 A0A1W2PP64 1363 aa10.42□□□□□ -0.74
PTPRD-204ENST00000397606 ARHGEF40Q8TER5 1519 aa10.42□□□□□ -0.74
PTPRD-204ENST00000397606 GTF2E1P29083 439 aaPredicted RBP10.42□□□□□ -0.74
PTPRD-204ENST00000397606 AMOTQ4VCS5 1084 aa10.42□□□□□ -0.74
PTPRD-204ENST00000397606 METP08581 1390 aa10.42□□□□□ -0.74
PTPRD-204ENST00000397606 DDX54Q8TDD1 881 aaKnown RBP10.42□□□□□ -0.74
PTPRD-204ENST00000397606 PIK3R4Q99570 1358 aa10.42□□□□□ -0.74
PTPRD-204ENST00000397606 RNF17Q9BXT8 1623 aaKnown RBP10.42□□□□□ -0.74
PTPRD-204ENST00000397606 ADAMTS2O95450 1211 aa10.42□□□□□ -0.74
PTPRD-204ENST00000397606 A2ML1A8K2U0 1454 aa10.41□□□□□ -0.74
PTPRD-204ENST00000397606 TMPOP42166 694 aaKnown RBP10.41□□□□□ -0.74
PTPRD-204ENST00000397606 ABCA6Q8N139 1617 aa10.41□□□□□ -0.74
PTPRD-204ENST00000397606 FKBP5Q13451 457 aaPredicted RBP10.41□□□□□ -0.74
PTPRD-204ENST00000397606 CABP4P57796 275 aa10.41□□□□□ -0.74
PTPRD-204ENST00000397606 NECTIN2Q92692 538 aa10.41□□□□□ -0.74
PTPRD-204ENST00000397606 KIDINS220Q9ULH0 1771 aa10.41□□□□□ -0.74
PTPRD-204ENST00000397606 TAF7LQ5H9L4 462 aa10.41□□□□□ -0.74
PTPRD-204ENST00000397606 GNAT3A8MTJ3 354 aa10.4□□□□□ -0.74
PTPRD-204ENST00000397606 CFAP44Q96MT7 982 aa10.4□□□□□ -0.74
PTPRD-204ENST00000397606 CARD14Q9BXL6 1004 aa10.4□□□□□ -0.74
PTPRD-204ENST00000397606 CHMP3Q9Y3E7 222 aa10.4□□□□□ -0.74
PTPRD-204ENST00000397606 CCDC30Q5VVM6 783 aa10.4□□□□□ -0.74
PTPRD-204ENST00000397606 DZIP1LQ8IYY4 767 aaKnown RBP10.4□□□□□ -0.74
PTPRD-204ENST00000397606 LRRC59Q96AG4 307 aaKnown RBP10.4□□□□□ -0.74
PTPRD-204ENST00000397606 PLEKHG3A1L390 1219 aa10.4□□□□□ -0.74
PTPRD-204ENST00000397606 CT47B1P0C2W7 299 aaPredicted RBP10.4□□□□□ -0.74
PTPRD-204ENST00000397606 NGLY1Q96IV0 654 aa10.4□□□□□ -0.74
PTPRD-204ENST00000397606 PHF23Q9BUL5 403 aaPredicted RBP10.4□□□□□ -0.74
PTPRD-204ENST00000397606 DDX19BQ9UMR2 479 aa10.4□□□□□ -0.74
PTPRD-204ENST00000397606 APBB1O00213 710 aa10.4□□□□□ -0.75
PTPRD-204ENST00000397606 CDCA7LQ96GN5 454 aa10.4□□□□□ -0.75
PTPRD-204ENST00000397606 TCERG1O14776 1098 aaKnown RBP10.39□□□□□ -0.75
PTPRD-204ENST00000397606 TMX4Q9H1E5 349 aaPredicted RBP10.39□□□□□ -0.75
PTPRD-204ENST00000397606 EDC4Q6P2E9 1401 aaKnown RBP10.39□□□□□ -0.75
PTPRD-204ENST00000397606 ZMYM4Q5VZL5 1548 aa10.39□□□□□ -0.75
PTPRD-204ENST00000397606 PLIN1O60240 522 aa10.39□□□□□ -0.75
PTPRD-204ENST00000397606 EXOSC9Q06265 439 aaKnown RBP10.39□□□□□ -0.75
PTPRD-204ENST00000397606 PARD3Q8TEW0 1356 aa10.39□□□□□ -0.75
PTPRD-204ENST00000397606 TWISTNBQ3B726 338 aaPredicted RBP10.39□□□□□ -0.75
PTPRD-204ENST00000397606 CLTCL1P53675 1640 aa10.38□□□□□ -0.75
PTPRD-204ENST00000397606 NPC1L1Q9UHC9 1359 aa10.38□□□□□ -0.75
PTPRD-204ENST00000397606 ORAI2Q96SN7 254 aa10.38□□□□□ -0.75
PTPRD-204ENST00000397606 SPHKAPQ2M3C7 1700 aa10.38□□□□□ -0.75
PTPRD-204ENST00000397606 MAP3K4Q9Y6R4 1608 aa10.38□□□□□ -0.75
PTPRD-204ENST00000397606 PLEKHH1Q9ULM0 1364 aa10.38□□□□□ -0.75
PTPRD-204ENST00000397606 PER1O15534 1290 aaPredicted RBP10.38□□□□□ -0.75
PTPRD-204ENST00000397606 ANKRD24Q8TF21 1146 aa10.38□□□□□ -0.75
PTPRD-204ENST00000397606 C9orf78Q9NZ63 289 aaPredicted RBP10.38□□□□□ -0.75
PTPRD-204ENST00000397606 SLAIN2Q9P270 581 aa10.38□□□□□ -0.75
PTPRD-204ENST00000397606 WWC1Q8IX03 1113 aa10.38□□□□□ -0.75
PTPRD-204ENST00000397606 COG6Q9Y2V7 657 aa10.38□□□□□ -0.75
PTPRD-204ENST00000397606 GCP02774 474 aa10.37□□□□□ -0.75
PTPRD-204ENST00000397606 HSP90AB2PQ58FF8 381 aa10.37□□□□□ -0.75
PTPRD-204ENST00000397606 USHBP1Q8N6Y0 703 aa10.37□□□□□ -0.75
PTPRD-204ENST00000397606 POLKQ9UBT6 870 aa10.37□□□□□ -0.75
PTPRD-204ENST00000397606 FLT4P35916 1363 aa10.37□□□□□ -0.75
PTPRD-204ENST00000397606 TMEM94Q12767 1356 aa10.37□□□□□ -0.75
PTPRD-204ENST00000397606 FAM135BQ49AJ0 1406 aa10.37□□□□□ -0.75
PTPRD-204ENST00000397606 CHRNA2Q15822 529 aa10.37□□□□□ -0.75
PTPRD-204ENST00000397606 TSR2Q969E8 191 aaKnown RBP10.37□□□□□ -0.75
PTPRD-204ENST00000397606 CAMSAP1Q5T5Y3 1602 aa10.37□□□□□ -0.75
PTPRD-204ENST00000397606 ZNF428Q96B54 188 aa10.36□□□□□ -0.75
PTPRD-204ENST00000397606 CEP152O94986 1710 aa10.36□□□□□ -0.75
PTPRD-204ENST00000397606 ADGRB3O60242 1522 aa10.36□□□□□ -0.75
PTPRD-204ENST00000397606 RBM42Q9BTD8 480 aaKnown RBP10.36□□□□□ -0.75
PTPRD-204ENST00000397606 AAMPQ13685 434 aa10.36□□□□□ -0.75
PTPRD-204ENST00000397606 HDGFL1Q5TGJ6 251 aa10.36□□□□□ -0.75
PTPRD-204ENST00000397606 ZRANB1Q9UGI0 708 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms