RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 NGLY1Q96IV0 654 aa23.32■■□□□ 1.32
TSPAN4-205ENST00000397406 PANK3Q9H999 370 aa23.31■■□□□ 1.32
TSPAN4-205ENST00000397406 ANKARQ7Z5J8 1434 aa23.3■■□□□ 1.32
TSPAN4-205ENST00000397406 PMFBP1Q8TBY8 1022 aa23.3■■□□□ 1.32
TSPAN4-205ENST00000397406 SLC12A5Q9H2X9 1139 aa23.3■■□□□ 1.32
TSPAN4-205ENST00000397406 PER1O15534 1290 aaPredicted RBP23.28■■□□□ 1.32
TSPAN4-205ENST00000397406 TMC1Q8TDI8 760 aa23.28■■□□□ 1.32
TSPAN4-205ENST00000397406 NUDT16Q96DE0 195 aaKnown RBP23.28■■□□□ 1.32
TSPAN4-205ENST00000397406 CDK12Q9NYV4 1490 aaPredicted RBP23.28■■□□□ 1.32
TSPAN4-205ENST00000397406 RGS12O14924 1447 aa23.27■■□□□ 1.32
TSPAN4-205ENST00000397406 BCL9LQ86UU0 1499 aa23.27■■□□□ 1.32
TSPAN4-205ENST00000397406 CD163L1Q9NR16 1453 aa23.27■■□□□ 1.32
TSPAN4-205ENST00000397406 AKAP12Q02952 1782 aa23.27■■□□□ 1.32
TSPAN4-205ENST00000397406 PPIP5K1Q6PFW1 1433 aa23.26■■□□□ 1.31
TSPAN4-205ENST00000397406 ANKRD36BQ8N2N9 1353 aa23.26■■□□□ 1.31
TSPAN4-205ENST00000397406 USP21Q9UK80 565 aa23.26■■□□□ 1.31
TSPAN4-205ENST00000397406 TNS3Q68CZ2 1445 aa23.26■■□□□ 1.31
TSPAN4-205ENST00000397406 SBNO1A3KN83 1393 aa23.25■■□□□ 1.31
TSPAN4-205ENST00000397406 RBM6P78332 1123 aaKnown RBP23.25■■□□□ 1.31
TSPAN4-205ENST00000397406 CABLES1Q8TDN4 633 aa23.25■■□□□ 1.31
TSPAN4-205ENST00000397406 ATRNO75882 1429 aa23.24■■□□□ 1.31
TSPAN4-205ENST00000397406 CCDC61Q9Y6R9 512 aa23.24■■□□□ 1.31
TSPAN4-205ENST00000397406 UPF1Q92900 1129 aaKnown RBP eCLIP23.23■■□□□ 1.312e-9■■■■■ 55.1
TSPAN4-205ENST00000397406 CABP1Q9NZU7 370 aa23.23■■□□□ 1.31
TSPAN4-205ENST00000397406 MON2Q7Z3U7 1717 aa23.23■■□□□ 1.31
TSPAN4-205ENST00000397406 A0A1W2PP64 1363 aa23.22■■□□□ 1.31
TSPAN4-205ENST00000397406 MIER1Q8N108 512 aa23.22■■□□□ 1.31
TSPAN4-205ENST00000397406 CARD14Q9BXL6 1004 aa23.22■■□□□ 1.31
TSPAN4-205ENST00000397406 PSME1Q06323 249 aa23.21■■□□□ 1.31
TSPAN4-205ENST00000397406 TRPM3Q9HCF6 1732 aaPredicted RBP23.19■■□□□ 1.3
TSPAN4-205ENST00000397406 CPSF1Q10570 1443 aaKnown RBP23.19■■□□□ 1.3
TSPAN4-205ENST00000397406 ANP32CO43423 234 aa23.19■■□□□ 1.3
TSPAN4-205ENST00000397406 SLIT2O94813 1529 aa23.19■■□□□ 1.3
TSPAN4-205ENST00000397406 NSD3Q9BZ95 1437 aa23.18■■□□□ 1.3
TSPAN4-205ENST00000397406 TERF2IPQ9NYB0 399 aa23.18■■□□□ 1.3
TSPAN4-205ENST00000397406 TRPC5Q9UL62 973 aaPredicted RBP23.18■■□□□ 1.3
TSPAN4-205ENST00000397406 MARF1Q9Y4F3 1742 aaKnown RBP23.18■■□□□ 1.3
TSPAN4-205ENST00000397406 PLEKHG3A1L390 1219 aa23.17■■□□□ 1.3
TSPAN4-205ENST00000397406 PLEKHG5O94827 1062 aa23.17■■□□□ 1.3
TSPAN4-205ENST00000397406 KNSTRNQ9Y448 316 aa23.16■■□□□ 1.3
TSPAN4-205ENST00000397406 NRKQ7Z2Y5 1582 aa23.16■■□□□ 1.3
TSPAN4-205ENST00000397406 NPC1L1Q9UHC9 1359 aa23.16■■□□□ 1.3
TSPAN4-205ENST00000397406 AMER1Q5JTC6 1135 aaPredicted RBP23.16■■□□□ 1.3
TSPAN4-205ENST00000397406 HDGFL2Q7Z4V5 671 aaPredicted RBP23.16■■□□□ 1.3
TSPAN4-205ENST00000397406 KIF20BQ96Q89 1820 aa23.15■■□□□ 1.3
TSPAN4-205ENST00000397406 PRKRIP1Q9H875 184 aaPredicted RBP23.15■■□□□ 1.3
TSPAN4-205ENST00000397406 ARHGEF10O15013 1369 aa23.14■■□□□ 1.29
TSPAN4-205ENST00000397406 LMOD2Q6P5Q4 547 aa23.14■■□□□ 1.29
TSPAN4-205ENST00000397406 ABCA3Q99758 1704 aa23.13■■□□□ 1.29
TSPAN4-205ENST00000397406 POLR3AO14802 1390 aaPredicted RBP23.13■■□□□ 1.29
TSPAN4-205ENST00000397406 ALS2Q96Q42 1657 aa23.13■■□□□ 1.29
TSPAN4-205ENST00000397406 ANKRD26Q9UPS8 1709 aa23.13■■□□□ 1.29
TSPAN4-205ENST00000397406 KTN1Q86UP2 1357 aaKnown RBP23.12■■□□□ 1.29
TSPAN4-205ENST00000397406 UNC5CLQ8IV45 518 aa23.12■■□□□ 1.29
TSPAN4-205ENST00000397406 ACEP12821 1306 aa23.12■■□□□ 1.29
TSPAN4-205ENST00000397406 FAM83GA6ND36 823 aa23.11■■□□□ 1.29
TSPAN4-205ENST00000397406 GJD4Q96KN9 370 aaPredicted RBP23.11■■□□□ 1.29
TSPAN4-205ENST00000397406 PARD3Q8TEW0 1356 aa23.11■■□□□ 1.29
TSPAN4-205ENST00000397406 EDC4Q6P2E9 1401 aaKnown RBP23.1■■□□□ 1.29
TSPAN4-205ENST00000397406 NGDNQ8NEJ9 315 aaKnown RBP23.1■■□□□ 1.29
TSPAN4-205ENST00000397406 ZNF692Q9BU19 519 aaPredicted RBP23.09■■□□□ 1.29
TSPAN4-205ENST00000397406 GLI3P10071 1580 aa23.09■■□□□ 1.29
TSPAN4-205ENST00000397406 CC2D1BQ5T0F9 858 aaKnown RBP23.08■■□□□ 1.29
TSPAN4-205ENST00000397406 USP6P35125 1406 aa23.08■■□□□ 1.29
TSPAN4-205ENST00000397406 CNGB1Q14028 1251 aaPredicted RBP23.08■■□□□ 1.28
TSPAN4-205ENST00000397406 CGNL1Q0VF96 1302 aa23.07■■□□□ 1.28
TSPAN4-205ENST00000397406 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.07■■□□□ 1.28
TSPAN4-205ENST00000397406 SSH2Q76I76 1423 aa23.06■■□□□ 1.28
TSPAN4-205ENST00000397406 RALBP1Q15311 655 aa23.06■■□□□ 1.28
TSPAN4-205ENST00000397406 NSD2O96028 1365 aa23.06■■□□□ 1.28
TSPAN4-205ENST00000397406 CRYBG1Q9Y4K1 1723 aa23.05■■□□□ 1.28
TSPAN4-205ENST00000397406 HAP1P54257 671 aaPredicted RBP23.05■■□□□ 1.28
TSPAN4-205ENST00000397406 PAK3O75914 559 aaPredicted RBP23.03■■□□□ 1.28
TSPAN4-205ENST00000397406 PLCH1Q4KWH8 1693 aa23.03■■□□□ 1.28
TSPAN4-205ENST00000397406 VPS72Q15906 364 aa23.02■■□□□ 1.28
TSPAN4-205ENST00000397406 CCER2I3L3R5 266 aa23.01■■□□□ 1.27
TSPAN4-205ENST00000397406 FYB1O15117 783 aa23.01■■□□□ 1.27
TSPAN4-205ENST00000397406 TTC21BQ7Z4L5 1316 aa23.01■■□□□ 1.27
TSPAN4-205ENST00000397406 NUTM2GQ5VZR2 741 aa23■■□□□ 1.27
TSPAN4-205ENST00000397406 PIK3C2AO00443 1686 aa23■■□□□ 1.27
TSPAN4-205ENST00000397406 MYBBP1AQ9BQG0 1328 aaKnown RBP23■■□□□ 1.27
TSPAN4-205ENST00000397406 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.99■■□□□ 1.27
TSPAN4-205ENST00000397406 USP54Q70EL1 1684 aa22.99■■□□□ 1.27
TSPAN4-205ENST00000397406 EP400Q96L91 3159 aa22.98■■□□□ 1.27
TSPAN4-205ENST00000397406 BRD4O60885 1362 aaPredicted RBP22.98■■□□□ 1.27
TSPAN4-205ENST00000397406 NWD2Q9ULI1 1742 aa22.98■■□□□ 1.27
TSPAN4-205ENST00000397406 ONECUT3O60422 494 aaPredicted RBP22.98■■□□□ 1.27
TSPAN4-205ENST00000397406 BTG4Q9NY30 223 aa22.98■■□□□ 1.27
TSPAN4-205ENST00000397406 NRAPQ86VF7 1730 aa22.97■■□□□ 1.27
TSPAN4-205ENST00000397406 TTC21AQ8NDW8 1320 aa22.97■■□□□ 1.27
TSPAN4-205ENST00000397406 GGNBP2Q9H3C7 697 aa22.97■■□□□ 1.27
TSPAN4-205ENST00000397406 NME9Q86XW9 330 aa22.96■■□□□ 1.27
TSPAN4-205ENST00000397406 MORC1Q86VD1 984 aa22.95■■□□□ 1.26
TSPAN4-205ENST00000397406 SEPT12Q8IYM1 358 aa22.95■■□□□ 1.26
TSPAN4-205ENST00000397406 KIAA0232Q92628 1395 aa22.95■■□□□ 1.26
TSPAN4-205ENST00000397406 CHRNA2Q15822 529 aa22.93■■□□□ 1.26
TSPAN4-205ENST00000397406 CCDC184Q52MB2 194 aa22.93■■□□□ 1.26
TSPAN4-205ENST00000397406 COL14A1Q05707 1796 aaKnown RBP22.93■■□□□ 1.26
TSPAN4-205ENST00000397406 PHRF1Q9P1Y6 1649 aaKnown RBP22.93■■□□□ 1.26
TSPAN4-205ENST00000397406 OVOS2A0A0J9YW53 1432 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms