RNA–Protein interactions for RNA: ENST00000397035.7

ATP2A3-204, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 5 BASIC

Gene ATP2A3, Length 4,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-204ENST00000397035 NPHP1O15259 732 aa18.36■□□□□ 0.53
ATP2A3-204ENST00000397035 KLHL40Q2TBA0 621 aa18.36■□□□□ 0.53
ATP2A3-204ENST00000397035 GAS2L3Q86XJ1 694 aa18.36■□□□□ 0.53
ATP2A3-204ENST00000397035 CARD14Q9BXL6 1004 aa18.36■□□□□ 0.53
ATP2A3-204ENST00000397035 MAGI3Q5TCQ9 1506 aa18.36■□□□□ 0.53
ATP2A3-204ENST00000397035 FKBP5Q13451 457 aaPredicted RBP18.35■□□□□ 0.53
ATP2A3-204ENST00000397035 FBLN1P23142 703 aa18.35■□□□□ 0.53
ATP2A3-204ENST00000397035 MAPK8IP2Q13387 824 aaPredicted RBP18.35■□□□□ 0.53
ATP2A3-204ENST00000397035 HSP90B1P14625 803 aaKnown RBP18.35■□□□□ 0.53
ATP2A3-204ENST00000397035 PRIM1P49642 420 aaKnown RBP18.35■□□□□ 0.53
ATP2A3-204ENST00000397035 CCDC9Q9Y3X0 531 aaKnown RBP18.35■□□□□ 0.53
ATP2A3-204ENST00000397035 MAP4K4O95819 1239 aaPredicted RBP18.34■□□□□ 0.53
ATP2A3-204ENST00000397035 FOSBP53539 338 aa18.34■□□□□ 0.53
ATP2A3-204ENST00000397035 DCTN1Q14203 1278 aa18.34■□□□□ 0.53
ATP2A3-204ENST00000397035 LMOD2Q6P5Q4 547 aa18.34■□□□□ 0.53
ATP2A3-204ENST00000397035 USP25Q9UHP3 1055 aa18.34■□□□□ 0.53
ATP2A3-204ENST00000397035 LARP6Q9BRS8 491 aaKnown RBP18.34■□□□□ 0.53
ATP2A3-204ENST00000397035 CWC22Q9HCG8 908 aaKnown RBP18.34■□□□□ 0.53
ATP2A3-204ENST00000397035 ATP6V1DQ9Y5K8 247 aa18.34■□□□□ 0.53
ATP2A3-204ENST00000397035 FAM177BA6PVY3 158 aa18.33■□□□□ 0.53
ATP2A3-204ENST00000397035 ERC2O15083 957 aa18.33■□□□□ 0.53
ATP2A3-204ENST00000397035 STAC3Q96MF2 364 aa18.33■□□□□ 0.53
ATP2A3-204ENST00000397035 BMP2KLQ5H9B9 411 aa18.33■□□□□ 0.52
ATP2A3-204ENST00000397035 RAB3GAP1Q15042 981 aa18.32■□□□□ 0.52
ATP2A3-204ENST00000397035 CT47B1P0C2W7 299 aaPredicted RBP18.32■□□□□ 0.52
ATP2A3-204ENST00000397035 COG3Q96JB2 828 aa18.32■□□□□ 0.52
ATP2A3-204ENST00000397035 TSHZ3Q63HK5 1081 aa18.32■□□□□ 0.52
ATP2A3-204ENST00000397035 BICD2Q8TD16 824 aa18.32■□□□□ 0.52
ATP2A3-204ENST00000397035 ZMYM4Q5VZL5 1548 aa18.31■□□□□ 0.52
ATP2A3-204ENST00000397035 GOLGA6L19H0YKK7 550 aa18.31■□□□□ 0.52
ATP2A3-204ENST00000397035 DIAPH3Q9NSV4 1193 aa18.31■□□□□ 0.52
ATP2A3-204ENST00000397035 SPDYE4A6NLX3 237 aa18.31■□□□□ 0.52
ATP2A3-204ENST00000397035 BECN2A8MW95 431 aa18.31■□□□□ 0.52
ATP2A3-204ENST00000397035 NUCB1Q02818 461 aa18.31■□□□□ 0.52
ATP2A3-204ENST00000397035 EXOC6BQ9Y2D4 811 aa18.31■□□□□ 0.52
ATP2A3-204ENST00000397035 EIF2S2P20042 333 aaKnown RBP18.31■□□□□ 0.52
ATP2A3-204ENST00000397035 TNNT3P45378 269 aaPredicted RBP18.31■□□□□ 0.52
ATP2A3-204ENST00000397035 HMGN5P82970 282 aaKnown RBP18.31■□□□□ 0.52
ATP2A3-204ENST00000397035 SASS6Q6UVJ0 657 aa18.31■□□□□ 0.52
ATP2A3-204ENST00000397035 ZNF428Q96B54 188 aa18.31■□□□□ 0.52
ATP2A3-204ENST00000397035 ANTXR1Q9H6X2 564 aa18.31■□□□□ 0.52
ATP2A3-204ENST00000397035 CC2D2AQ9P2K1 1620 aa18.3■□□□□ 0.52
ATP2A3-204ENST00000397035 C16orf71Q8IYS4 520 aaPredicted RBP18.3■□□□□ 0.52
ATP2A3-204ENST00000397035 BLMP54132 1417 aaPredicted RBP18.3■□□□□ 0.52
ATP2A3-204ENST00000397035 SCAPERQ9BY12 1400 aa18.3■□□□□ 0.52
ATP2A3-204ENST00000397035 URB2Q14146 1524 aaKnown RBP18.3■□□□□ 0.52
ATP2A3-204ENST00000397035 HDAC1Q13547 482 aaPredicted RBP18.3■□□□□ 0.52
ATP2A3-204ENST00000397035 ZGPATQ8N5A5 531 aaKnown RBP18.3■□□□□ 0.52
ATP2A3-204ENST00000397035 USP19O94966 1318 aa18.3■□□□□ 0.52
ATP2A3-204ENST00000397035 KIAA0586Q9BVV6 1533 aa18.29■□□□□ 0.52
ATP2A3-204ENST00000397035 OFD1O75665 1012 aa18.29■□□□□ 0.52
ATP2A3-204ENST00000397035 TRIM5Q9C035 493 aa18.29■□□□□ 0.52
ATP2A3-204ENST00000397035 CABP1Q9NZU7 370 aa18.29■□□□□ 0.52
ATP2A3-204ENST00000397035 SMC5Q8IY18 1101 aa18.28■□□□□ 0.52
ATP2A3-204ENST00000397035 IGSF3O75054 1194 aa18.28■□□□□ 0.52
ATP2A3-204ENST00000397035 SLC4A2P04920 1241 aa18.28■□□□□ 0.52
ATP2A3-204ENST00000397035 KIF3AQ9Y496 699 aa18.28■□□□□ 0.52
ATP2A3-204ENST00000397035 DDX54Q8TDD1 881 aaKnown RBP18.27■□□□□ 0.52
ATP2A3-204ENST00000397035 PRAM1Q96QH2 718 aa18.27■□□□□ 0.52
ATP2A3-204ENST00000397035 DENND4BO75064 1496 aaPredicted RBP18.27■□□□□ 0.52
ATP2A3-204ENST00000397035 RBSNQ9H1K0 784 aa18.27■□□□□ 0.52
ATP2A3-204ENST00000397035 TSPYL4Q9UJ04 414 aa18.27■□□□□ 0.52
ATP2A3-204ENST00000397035 CHAMP1Q96JM3 812 aa18.27■□□□□ 0.51
ATP2A3-204ENST00000397035 IL1RAPL2Q9NP60 686 aa18.27■□□□□ 0.51
ATP2A3-204ENST00000397035 MAGI1Q96QZ7 1491 aaPredicted RBP18.26■□□□□ 0.51
ATP2A3-204ENST00000397035 H3BQV1 296 aa18.26■□□□□ 0.51
ATP2A3-204ENST00000397035 IFFO2Q5TF58 517 aa18.26■□□□□ 0.51
ATP2A3-204ENST00000397035 NUP153P49790 1475 aaKnown RBP18.26■□□□□ 0.51
ATP2A3-204ENST00000397035 KDM5BQ9UGL1 1544 aa18.26■□□□□ 0.51
ATP2A3-204ENST00000397035 CCDC141Q6ZP82 1450 aa18.26■□□□□ 0.51
ATP2A3-204ENST00000397035 SNX21Q969T3 373 aa18.26■□□□□ 0.51
ATP2A3-204ENST00000397035 MIS18AQ9NYP9 233 aa18.26■□□□□ 0.51
ATP2A3-204ENST00000397035 FSD2A1L4K1 749 aa18.26■□□□□ 0.51
ATP2A3-204ENST00000397035 UHRF1BP1Q6BDS2 1440 aa18.26■□□□□ 0.51
ATP2A3-204ENST00000397035 AMPHP49418 695 aa18.25■□□□□ 0.51
ATP2A3-204ENST00000397035 TPD52L1Q16890 204 aaPredicted RBP18.25■□□□□ 0.51
ATP2A3-204ENST00000397035 PDCL2Q8N4E4 241 aa18.25■□□□□ 0.51
ATP2A3-204ENST00000397035 COL17A1Q9UMD9 1497 aaPredicted RBP18.25■□□□□ 0.51
ATP2A3-204ENST00000397035 ASXL1Q8IXJ9 1541 aa18.25■□□□□ 0.51
ATP2A3-204ENST00000397035 TTC12Q9H892 705 aaPredicted RBP18.25■□□□□ 0.51
ATP2A3-204ENST00000397035 SYNJ2O15056 1496 aa18.24■□□□□ 0.51
ATP2A3-204ENST00000397035 CCAR2Q8N163 923 aaKnown RBP18.24■□□□□ 0.51
ATP2A3-204ENST00000397035 TSC1Q92574 1164 aa18.24■□□□□ 0.51
ATP2A3-204ENST00000397035 RRS1Q15050 365 aaKnown RBP18.24■□□□□ 0.51
ATP2A3-204ENST00000397035 SURF6O75683 361 aaKnown RBP18.23■□□□□ 0.51
ATP2A3-204ENST00000397035 ZKSCAN5Q9Y2L8 839 aa18.23■□□□□ 0.51
ATP2A3-204ENST00000397035 ERBB4Q15303 1308 aa18.23■□□□□ 0.51
ATP2A3-204ENST00000397035 SCAF11Q99590 1463 aaKnown RBP18.23■□□□□ 0.51
ATP2A3-204ENST00000397035 CEBPZQ03701 1054 aaKnown RBP18.23■□□□□ 0.51
ATP2A3-204ENST00000397035 PPP4R3BQ5MIZ7 849 aa18.23■□□□□ 0.51
ATP2A3-204ENST00000397035 FERMT3Q86UX7 667 aa18.23■□□□□ 0.51
ATP2A3-204ENST00000397035 HTATSF1O43719 755 aaKnown RBP18.22■□□□□ 0.51
ATP2A3-204ENST00000397035 HCLS1P14317 486 aaPredicted RBP18.22■□□□□ 0.51
ATP2A3-204ENST00000397035 CAMK4Q16566 473 aa18.22■□□□□ 0.51
ATP2A3-204ENST00000397035 ZBTB40Q9NUA8 1239 aa18.22■□□□□ 0.51
ATP2A3-204ENST00000397035 WDR33Q9C0J8 1336 aaKnown RBP18.22■□□□□ 0.51
ATP2A3-204ENST00000397035 ZKSCAN1P17029 563 aaPredicted RBP18.22■□□□□ 0.51
ATP2A3-204ENST00000397035 FAM184AQ8NB25 1140 aa18.22■□□□□ 0.51
ATP2A3-204ENST00000397035 MCM2P49736 904 aa18.21■□□□□ 0.51
ATP2A3-204ENST00000397035 F6X3S4 739 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 146.3 ms