RNA–Protein interactions for RNA: ENST00000397006.2

PRKAA1-203, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, humanhuman

TSL 3

Gene PRKAA1, Length 425 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAA1-203ENST00000397006 PLEKHG3A1L390 1219 aa12.71□□□□□ -0.37
PRKAA1-203ENST00000397006 PLEKHG5O94827 1062 aa12.71□□□□□ -0.37
PRKAA1-203ENST00000397006 KCNA4P22459 653 aa12.71□□□□□ -0.37
PRKAA1-203ENST00000397006 HOXD11P31277 338 aaPredicted RBP12.71□□□□□ -0.37
PRKAA1-203ENST00000397006 SIN3AQ96ST3 1273 aa12.71□□□□□ -0.37
PRKAA1-203ENST00000397006 BCL9LQ86UU0 1499 aa12.71□□□□□ -0.38
PRKAA1-203ENST00000397006 CCDC125Q86Z20 511 aa12.7□□□□□ -0.38
PRKAA1-203ENST00000397006 CABLES1Q8TDN4 633 aa12.7□□□□□ -0.38
PRKAA1-203ENST00000397006 SLIT2O94813 1529 aa12.7□□□□□ -0.38
PRKAA1-203ENST00000397006 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.7□□□□□ -0.38
PRKAA1-203ENST00000397006 SLC24A1O60721 1099 aa12.69□□□□□ -0.38
PRKAA1-203ENST00000397006 VPS72Q15906 364 aa12.69□□□□□ -0.38
PRKAA1-203ENST00000397006 RNF216Q9NWF9 866 aaPredicted RBP12.69□□□□□ -0.38
PRKAA1-203ENST00000397006 ACEP12821 1306 aa12.68□□□□□ -0.38
PRKAA1-203ENST00000397006 NBPF8Q3BBV2 869 aa12.68□□□□□ -0.38
PRKAA1-203ENST00000397006 POLR3AO14802 1390 aaPredicted RBP12.68□□□□□ -0.38
PRKAA1-203ENST00000397006 NLRP13Q86W25 1043 aa12.67□□□□□ -0.38
PRKAA1-203ENST00000397006 ABTB2Q8N961 1025 aa12.67□□□□□ -0.38
PRKAA1-203ENST00000397006 PRDM11Q9NQV5 511 aa12.67□□□□□ -0.38
PRKAA1-203ENST00000397006 TRPM3Q9HCF6 1732 aaPredicted RBP12.66□□□□□ -0.38
PRKAA1-203ENST00000397006 NWD2Q9ULI1 1742 aa12.66□□□□□ -0.38
PRKAA1-203ENST00000397006 PPIP5K1Q6PFW1 1433 aa12.66□□□□□ -0.38
PRKAA1-203ENST00000397006 A0A0G2JS52 829 aa12.66□□□□□ -0.38
PRKAA1-203ENST00000397006 MYT1Q01538 1121 aa12.66□□□□□ -0.38
PRKAA1-203ENST00000397006 SF3B2Q13435 895 aaKnown RBP12.66□□□□□ -0.38
PRKAA1-203ENST00000397006 ZNF692Q9BU19 519 aaPredicted RBP12.66□□□□□ -0.38
PRKAA1-203ENST00000397006 BTG4Q9NY30 223 aa12.66□□□□□ -0.38
PRKAA1-203ENST00000397006 ALS2Q96Q42 1657 aa12.65□□□□□ -0.38
PRKAA1-203ENST00000397006 FAM83GA6ND36 823 aa12.65□□□□□ -0.38
PRKAA1-203ENST00000397006 NPM3O75607 178 aaKnown RBP12.65□□□□□ -0.38
PRKAA1-203ENST00000397006 CARD11Q9BXL7 1154 aa12.65□□□□□ -0.38
PRKAA1-203ENST00000397006 CABP2Q9NPB3 220 aa12.65□□□□□ -0.38
PRKAA1-203ENST00000397006 TRPM1Q7Z4N2 1603 aa12.65□□□□□ -0.38
PRKAA1-203ENST00000397006 RALGAPBQ86X10 1494 aa12.65□□□□□ -0.38
PRKAA1-203ENST00000397006 QRICH2Q9H0J4 1663 aa12.64□□□□□ -0.39
PRKAA1-203ENST00000397006 COL14A1Q05707 1796 aaKnown RBP12.64□□□□□ -0.39
PRKAA1-203ENST00000397006 EVA1CP58658 441 aa12.63□□□□□ -0.39
PRKAA1-203ENST00000397006 TOPAZ1Q8N9V7 1692 aa12.63□□□□□ -0.39
PRKAA1-203ENST00000397006 ABCA3Q99758 1704 aa12.62□□□□□ -0.39
PRKAA1-203ENST00000397006 PLCH1Q4KWH8 1693 aa12.62□□□□□ -0.39
PRKAA1-203ENST00000397006 SEPT12Q8IYM1 358 aa12.62□□□□□ -0.39
PRKAA1-203ENST00000397006 CABP1Q9NZU7 370 aa12.62□□□□□ -0.39
PRKAA1-203ENST00000397006 ONECUT3O60422 494 aaPredicted RBP12.61□□□□□ -0.39
PRKAA1-203ENST00000397006 KRT27Q7Z3Y8 459 aa12.61□□□□□ -0.39
PRKAA1-203ENST00000397006 SBNO2Q9Y2G9 1366 aa12.6□□□□□ -0.39
PRKAA1-203ENST00000397006 NLRP6P59044 892 aa12.6□□□□□ -0.39
PRKAA1-203ENST00000397006 ZC3H6P61129 1189 aaKnown RBP12.6□□□□□ -0.39
PRKAA1-203ENST00000397006 NUTM2GQ5VZR2 741 aa12.6□□□□□ -0.39
PRKAA1-203ENST00000397006 KIAA0232Q92628 1395 aa12.59□□□□□ -0.39
PRKAA1-203ENST00000397006 KCNH5Q8NCM2 988 aa12.59□□□□□ -0.39
PRKAA1-203ENST00000397006 USP6P35125 1406 aa12.59□□□□□ -0.39
PRKAA1-203ENST00000397006 GLI3P10071 1580 aa12.59□□□□□ -0.39
PRKAA1-203ENST00000397006 SPATA31A5Q5VU36 1347 aa12.59□□□□□ -0.39
PRKAA1-203ENST00000397006 SPATA31A7Q8IWB4 1347 aa12.59□□□□□ -0.39
PRKAA1-203ENST00000397006 TTC21AQ8NDW8 1320 aa12.59□□□□□ -0.39
PRKAA1-203ENST00000397006 DCAF8L1A6NGE4 600 aa12.58□□□□□ -0.4
PRKAA1-203ENST00000397006 GCP02774 474 aa12.58□□□□□ -0.4
PRKAA1-203ENST00000397006 BLMP54132 1417 aaPredicted RBP12.58□□□□□ -0.4
PRKAA1-203ENST00000397006 FAM98CQ17RN3 349 aaKnown RBP12.58□□□□□ -0.4
PRKAA1-203ENST00000397006 HDGFL2Q7Z4V5 671 aaPredicted RBP12.58□□□□□ -0.4
PRKAA1-203ENST00000397006 PUS7Q96PZ0 661 aaKnown RBP12.58□□□□□ -0.4
PRKAA1-203ENST00000397006 STRN4Q9NRL3 753 aa12.58□□□□□ -0.4
PRKAA1-203ENST00000397006 ZRANB1Q9UGI0 708 aa12.58□□□□□ -0.4
PRKAA1-203ENST00000397006 TIMELESSQ9UNS1 1208 aa12.58□□□□□ -0.4
PRKAA1-203ENST00000397006 USP19O94966 1318 aa12.58□□□□□ -0.4
PRKAA1-203ENST00000397006 CPDO75976 1380 aa12.57□□□□□ -0.4
PRKAA1-203ENST00000397006 C11orf95C9JLR9 678 aaPredicted RBP12.57□□□□□ -0.4
PRKAA1-203ENST00000397006 PHRF1Q9P1Y6 1649 aaKnown RBP12.56□□□□□ -0.4
PRKAA1-203ENST00000397006 CHRNA2Q15822 529 aa12.56□□□□□ -0.4
PRKAA1-203ENST00000397006 TERF2IPQ9NYB0 399 aa12.56□□□□□ -0.4
PRKAA1-203ENST00000397006 THRAP3Q9Y2W1 955 aaKnown RBP12.56□□□□□ -0.4
PRKAA1-203ENST00000397006 CLSPNQ9HAW4 1339 aa12.56□□□□□ -0.4
PRKAA1-203ENST00000397006 ZBTB7CA1YPR0 619 aa12.55□□□□□ -0.4
PRKAA1-203ENST00000397006 BAG6P46379 1132 aa12.55□□□□□ -0.4
PRKAA1-203ENST00000397006 TMC1Q8TDI8 760 aa12.55□□□□□ -0.4
PRKAA1-203ENST00000397006 SPATA31A1Q5TZJ5 1347 aa12.55□□□□□ -0.4
PRKAA1-203ENST00000397006 KTN1Q86UP2 1357 aaKnown RBP12.55□□□□□ -0.4
PRKAA1-203ENST00000397006 NRAPQ86VF7 1730 aa12.54□□□□□ -0.4
PRKAA1-203ENST00000397006 CRYBG1Q9Y4K1 1723 aa12.54□□□□□ -0.4
PRKAA1-203ENST00000397006 PDE3BQ13370 1112 aa12.54□□□□□ -0.4
PRKAA1-203ENST00000397006 BARGINQ6ZT62 677 aa12.54□□□□□ -0.4
PRKAA1-203ENST00000397006 TTC21BQ7Z4L5 1316 aa12.54□□□□□ -0.4
PRKAA1-203ENST00000397006 NINLQ9Y2I6 1382 aa12.54□□□□□ -0.4
PRKAA1-203ENST00000397006 CDCA8Q53HL2 280 aa12.53□□□□□ -0.4
PRKAA1-203ENST00000397006 TCP11L2Q8N4U5 519 aa12.53□□□□□ -0.4
PRKAA1-203ENST00000397006 SSH2Q76I76 1423 aa12.53□□□□□ -0.4
PRKAA1-203ENST00000397006 NRKQ7Z2Y5 1582 aa12.52□□□□□ -0.4
PRKAA1-203ENST00000397006 FAM196AQ6ZSG2 479 aa12.52□□□□□ -0.41
PRKAA1-203ENST00000397006 USP35Q9P2H5 1018 aa12.52□□□□□ -0.41
PRKAA1-203ENST00000397006 TMF1P82094 1093 aa12.51□□□□□ -0.41
PRKAA1-203ENST00000397006 CDCA7Q9BWT1 371 aaPredicted RBP12.51□□□□□ -0.41
PRKAA1-203ENST00000397006 AATKQ6ZMQ8 1374 aa12.51□□□□□ -0.41
PRKAA1-203ENST00000397006 CPSF1Q10570 1443 aaKnown RBP12.51□□□□□ -0.41
PRKAA1-203ENST00000397006 TOM1L2Q6ZVM7 507 aa12.5□□□□□ -0.41
PRKAA1-203ENST00000397006 SLIT3O75094 1523 aa12.5□□□□□ -0.41
PRKAA1-203ENST00000397006 BRWD3Q6RI45 1802 aa12.49□□□□□ -0.41
PRKAA1-203ENST00000397006 CRB1P82279 1406 aa12.49□□□□□ -0.41
PRKAA1-203ENST00000397006 CSB-PGBD3P0DP91 1061 aa12.49□□□□□ -0.41
PRKAA1-203ENST00000397006 LARP1Q6PKG0 1096 aaKnown RBP12.49□□□□□ -0.41
PRKAA1-203ENST00000397006 PCGF6Q9BYE7 350 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms