RNA–Protein interactions for RNA: ENST00000396966.6

SCNN1A-205, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3 BASIC

Gene SCNN1A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-205ENST00000396966 CCDC146Q8IYE0 955 aa22.66■■□□□ 1.22
SCNN1A-205ENST00000396966 NRKQ7Z2Y5 1582 aa22.66■■□□□ 1.22
SCNN1A-205ENST00000396966 FMN2Q9NZ56 1722 aa22.65■■□□□ 1.22
SCNN1A-205ENST00000396966 NUTM2FA1L443 756 aa22.65■■□□□ 1.22
SCNN1A-205ENST00000396966 RNF123Q5XPI4 1314 aa22.64■■□□□ 1.21
SCNN1A-205ENST00000396966 NGEFQ8N5V2 710 aa22.64■■□□□ 1.21
SCNN1A-205ENST00000396966 NALCNQ8IZF0 1738 aa22.63■■□□□ 1.21
SCNN1A-205ENST00000396966 ACEP12821 1306 aa22.63■■□□□ 1.21
SCNN1A-205ENST00000396966 NKTRP30414 1462 aaKnown RBP22.63■■□□□ 1.21
SCNN1A-205ENST00000396966 ANKARQ7Z5J8 1434 aa22.61■■□□□ 1.21
SCNN1A-205ENST00000396966 APAF1O14727 1248 aa22.61■■□□□ 1.21
SCNN1A-205ENST00000396966 NME9Q86XW9 330 aa22.61■■□□□ 1.21
SCNN1A-205ENST00000396966 COL3A1P02461 1466 aaPredicted RBP22.6■■□□□ 1.21
SCNN1A-205ENST00000396966 COG3Q96JB2 828 aa22.6■■□□□ 1.21
SCNN1A-205ENST00000396966 RUNDC1Q96C34 613 aa22.59■■□□□ 1.21
SCNN1A-205ENST00000396966 CDCA7LQ96GN5 454 aa22.59■■□□□ 1.21
SCNN1A-205ENST00000396966 USP6P35125 1406 aa22.59■■□□□ 1.21
SCNN1A-205ENST00000396966 ZNF521Q96K83 1311 aa22.57■■□□□ 1.2
SCNN1A-205ENST00000396966 TTC21BQ7Z4L5 1316 aa22.57■■□□□ 1.2
SCNN1A-205ENST00000396966 U2AF1L5P0DN76 240 aaPredicted RBP22.57■■□□□ 1.2
SCNN1A-205ENST00000396966 U2AF1Q01081 240 aaKnown RBP eCLIP22.57■■□□□ 1.2
SCNN1A-205ENST00000396966 PNPLA6Q8IY17 1366 aa22.56■■□□□ 1.2
SCNN1A-205ENST00000396966 GOLGA2Q08379 1002 aa22.56■■□□□ 1.2
SCNN1A-205ENST00000396966 NWD1Q149M9 1564 aa22.56■■□□□ 1.2
SCNN1A-205ENST00000396966 AATKQ6ZMQ8 1374 aa22.56■■□□□ 1.2
SCNN1A-205ENST00000396966 DIAPH1O60610 1272 aaKnown RBP22.54■■□□□ 1.2
SCNN1A-205ENST00000396966 NGDNQ8NEJ9 315 aaKnown RBP22.54■■□□□ 1.2
SCNN1A-205ENST00000396966 PMFBP1Q8TBY8 1022 aa22.54■■□□□ 1.2
SCNN1A-205ENST00000396966 POLKQ9UBT6 870 aa22.54■■□□□ 1.2
SCNN1A-205ENST00000396966 ZRANB1Q9UGI0 708 aa22.54■■□□□ 1.2
SCNN1A-205ENST00000396966 ANP32EQ9BTT0 268 aa22.53■■□□□ 1.2
SCNN1A-205ENST00000396966 IQSEC2Q5JU85 1478 aa22.53■■□□□ 1.2
SCNN1A-205ENST00000396966 U2SURPO15042 1029 aaKnown RBP22.53■■□□□ 1.2
SCNN1A-205ENST00000396966 RCAN3Q9UKA8 241 aa22.53■■□□□ 1.2
SCNN1A-205ENST00000396966 TTC21AQ8NDW8 1320 aa22.52■■□□□ 1.2
SCNN1A-205ENST00000396966 ADGRL3Q9HAR2 1447 aa22.52■■□□□ 1.2
SCNN1A-205ENST00000396966 SSH2Q76I76 1423 aa22.52■■□□□ 1.2
SCNN1A-205ENST00000396966 PPM1GO15355 546 aaPredicted RBP22.51■■□□□ 1.19
SCNN1A-205ENST00000396966 CDK12Q9NYV4 1490 aaPredicted RBP22.51■■□□□ 1.19
SCNN1A-205ENST00000396966 TCP11L2Q8N4U5 519 aa22.5■■□□□ 1.19
SCNN1A-205ENST00000396966 PNNQ9H307 717 aaKnown RBP22.5■■□□□ 1.19
SCNN1A-205ENST00000396966 OVOS2A0A0J9YW53 1432 aa22.5■■□□□ 1.19
SCNN1A-205ENST00000396966 OVOS2Q6IE36 1432 aa22.5■■□□□ 1.19
SCNN1A-205ENST00000396966 FBLN1P23142 703 aa22.49■■□□□ 1.19
SCNN1A-205ENST00000396966 SLFN5Q08AF3 891 aa22.48■■□□□ 1.19
SCNN1A-205ENST00000396966 NCBP3Q53F19 620 aaKnown RBP22.48■■□□□ 1.19
SCNN1A-205ENST00000396966 CCDC136Q96JN2 1154 aa22.48■■□□□ 1.19
SCNN1A-205ENST00000396966 EMILIN1Q9Y6C2 1016 aa22.47■■□□□ 1.19
SCNN1A-205ENST00000396966 DUSP27Q5VZP5 1158 aa22.47■■□□□ 1.19
SCNN1A-205ENST00000396966 C14orf37Q86TY3 774 aa22.46■■□□□ 1.19
SCNN1A-205ENST00000396966 WWC1Q8IX03 1113 aa22.46■■□□□ 1.19
SCNN1A-205ENST00000396966 E9PSI1 815 aa22.46■■□□□ 1.19
SCNN1A-205ENST00000396966 RRP1P56182 461 aaKnown RBP22.46■■□□□ 1.19
SCNN1A-205ENST00000396966 RBM33Q96EV2 1170 aaKnown RBP22.46■■□□□ 1.19
SCNN1A-205ENST00000396966 PIK3C2AO00443 1686 aa22.45■■□□□ 1.18
SCNN1A-205ENST00000396966 MAPK8IP3Q9UPT6 1336 aa22.45■■□□□ 1.18
SCNN1A-205ENST00000396966 NEUROD2Q15784 382 aa22.45■■□□□ 1.18
SCNN1A-205ENST00000396966 CCDC27Q2M243 656 aa22.44■■□□□ 1.18
SCNN1A-205ENST00000396966 TRMT2AQ8IZ69 625 aaKnown RBP22.43■■□□□ 1.18
SCNN1A-205ENST00000396966 PLEKHF1Q96S99 279 aa22.43■■□□□ 1.18
SCNN1A-205ENST00000396966 RRP7AQ9Y3A4 280 aaKnown RBP22.43■■□□□ 1.18
SCNN1A-205ENST00000396966 USP31Q70CQ4 1352 aa22.43■■□□□ 1.18
SCNN1A-205ENST00000396966 RRS1Q15050 365 aaKnown RBP22.43■■□□□ 1.18
SCNN1A-205ENST00000396966 PHF8Q9UPP1 1060 aa22.43■■□□□ 1.18
SCNN1A-205ENST00000396966 USP54Q70EL1 1684 aa22.42■■□□□ 1.18
SCNN1A-205ENST00000396966 PROSER2Q86WR7 435 aaPredicted RBP22.42■■□□□ 1.18
SCNN1A-205ENST00000396966 MSH5O43196 834 aa22.42■■□□□ 1.18
SCNN1A-205ENST00000396966 FANCIQ9NVI1 1328 aa22.42■■□□□ 1.18
SCNN1A-205ENST00000396966 FCHSD2O94868 740 aa22.41■■□□□ 1.18
SCNN1A-205ENST00000396966 WDR63Q8IWG1 891 aa22.41■■□□□ 1.18
SCNN1A-205ENST00000396966 PHF23Q9BUL5 403 aaPredicted RBP22.41■■□□□ 1.18
SCNN1A-205ENST00000396966 LRRC7Q96NW7 1537 aa22.4■■□□□ 1.18
SCNN1A-205ENST00000396966 NEFMP07197 916 aa22.4■■□□□ 1.18
SCNN1A-205ENST00000396966 KDM4FA0A1W2PPD8 638 aa22.4■■□□□ 1.18
SCNN1A-205ENST00000396966 IL13P35225 146 aa22.39■■□□□ 1.17
SCNN1A-205ENST00000396966 STRCP1A6NGW2 1772 aa22.38■■□□□ 1.17
SCNN1A-205ENST00000396966 SPINK5Q9NQ38 1064 aaPredicted RBP22.38■■□□□ 1.17
SCNN1A-205ENST00000396966 MARF1Q9Y4F3 1742 aaKnown RBP22.38■■□□□ 1.17
SCNN1A-205ENST00000396966 PEAK1Q9H792 1746 aa22.37■■□□□ 1.17
SCNN1A-205ENST00000396966 ESCO1Q5FWF5 840 aa22.37■■□□□ 1.17
SCNN1A-205ENST00000396966 TMPOP42166 694 aaKnown RBP22.36■■□□□ 1.17
SCNN1A-205ENST00000396966 HSPA2P54652 639 aa22.36■■□□□ 1.17
SCNN1A-205ENST00000396966 RSPH6AQ9H0K4 717 aa22.36■■□□□ 1.17
SCNN1A-205ENST00000396966 DMRT2Q9Y5R5 561 aa22.36■■□□□ 1.17
SCNN1A-205ENST00000396966 NLRP6P59044 892 aa22.35■■□□□ 1.17
SCNN1A-205ENST00000396966 PAK3O75914 559 aaPredicted RBP22.34■■□□□ 1.17
SCNN1A-205ENST00000396966 EXOC6Q8TAG9 804 aa22.34■■□□□ 1.17
SCNN1A-205ENST00000396966 LMTK3Q96Q04 1460 aa22.34■■□□□ 1.17
SCNN1A-205ENST00000396966 KIF1AQ12756 1690 aa22.34■■□□□ 1.17
SCNN1A-205ENST00000396966 PRKAR2BP31323 418 aa22.34■■□□□ 1.17
SCNN1A-205ENST00000396966 C19orf44Q9H6X5 657 aa22.34■■□□□ 1.17
SCNN1A-205ENST00000396966 ABTB2Q8N961 1025 aa22.33■■□□□ 1.17
SCNN1A-205ENST00000396966 SOX12O15370 315 aa22.32■■□□□ 1.16
SCNN1A-205ENST00000396966 PSME1Q06323 249 aa22.32■■□□□ 1.16
SCNN1A-205ENST00000396966 STRCQ7RTU9 1775 aa22.32■■□□□ 1.16
SCNN1A-205ENST00000396966 HMOX1P09601 288 aa22.32■■□□□ 1.16
SCNN1A-205ENST00000396966 NCOA3Q9Y6Q9 1424 aa22.32■■□□□ 1.16
SCNN1A-205ENST00000396966 RIPK4P57078 832 aa22.31■■□□□ 1.16
SCNN1A-205ENST00000396966 SBNO1A3KN83 1393 aa22.3■■□□□ 1.16
SCNN1A-205ENST00000396966 MYH16Q9H6N6 1097 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms