RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 NEFMP07197 916 aa20.56■□□□□ 0.88
CCHCR1-202ENST00000396263 RIMS1Q86UR5 1692 aaKnown RBP20.56■□□□□ 0.88
CCHCR1-202ENST00000396263 NRXN3Q9Y4C0 1643 aa20.56■□□□□ 0.88
CCHCR1-202ENST00000396263 MED14O60244 1454 aa20.56■□□□□ 0.88
CCHCR1-202ENST00000396263 ATAD2Q6PL18 1390 aa20.55■□□□□ 0.88
CCHCR1-202ENST00000396263 MYH16Q9H6N6 1097 aa20.55■□□□□ 0.88
CCHCR1-202ENST00000396263 MAPK8IP3Q9UPT6 1336 aa20.55■□□□□ 0.88
CCHCR1-202ENST00000396263 NLRP1Q9C000 1473 aa20.55■□□□□ 0.88
CCHCR1-202ENST00000396263 U2AF1L5P0DN76 240 aaPredicted RBP20.54■□□□□ 0.88
CCHCR1-202ENST00000396263 U2AF1Q01081 240 aaKnown RBP eCLIP20.54■□□□□ 0.88
CCHCR1-202ENST00000396263 FRAT1Q92837 279 aaPredicted RBP20.54■□□□□ 0.88
CCHCR1-202ENST00000396263 COL3A1P02461 1466 aaPredicted RBP20.54■□□□□ 0.88
CCHCR1-202ENST00000396263 YTHDC2Q9H6S0 1430 aaKnown RBP20.53■□□□□ 0.88
CCHCR1-202ENST00000396263 SAFB2Q14151 953 aaKnown RBP eCLIP20.52■□□□□ 0.88
CCHCR1-202ENST00000396263 PMFBP1Q8TBY8 1022 aa20.52■□□□□ 0.88
CCHCR1-202ENST00000396263 SRPK2P78362 688 aaKnown RBP20.52■□□□□ 0.88
CCHCR1-202ENST00000396263 CD163L1Q9NR16 1453 aa20.52■□□□□ 0.87
CCHCR1-202ENST00000396263 STK26Q9P289 416 aa20.51■□□□□ 0.87
CCHCR1-202ENST00000396263 ADAMTSL3P82987 1691 aa20.51■□□□□ 0.87
CCHCR1-202ENST00000396263 CT47B1P0C2W7 299 aaPredicted RBP20.51■□□□□ 0.87
CCHCR1-202ENST00000396263 TMEM2Q9UHN6 1383 aa20.51■□□□□ 0.87
CCHCR1-202ENST00000396263 RLBP1P12271 317 aa20.5■□□□□ 0.87
CCHCR1-202ENST00000396263 TERF2IPQ9NYB0 399 aa20.5■□□□□ 0.87
CCHCR1-202ENST00000396263 PLEKHF1Q96S99 279 aa20.49■□□□□ 0.87
CCHCR1-202ENST00000396263 DAXXQ9UER7 740 aaPredicted RBP20.49■□□□□ 0.87
CCHCR1-202ENST00000396263 BRPF3Q9ULD4 1205 aa20.48■□□□□ 0.87
CCHCR1-202ENST00000396263 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.48■□□□□ 0.87
CCHCR1-202ENST00000396263 PRAM1Q96QH2 718 aa20.48■□□□□ 0.87
CCHCR1-202ENST00000396263 GGNBP2Q9H3C7 697 aa20.47■□□□□ 0.87
CCHCR1-202ENST00000396263 FYB1O15117 783 aa20.47■□□□□ 0.87
CCHCR1-202ENST00000396263 PCDHB15Q9Y5E8 787 aa20.47■□□□□ 0.87
CCHCR1-202ENST00000396263 TNNQ9UQP3 1299 aa20.46■□□□□ 0.87
CCHCR1-202ENST00000396263 MINK1Q8N4C8 1332 aaPredicted RBP20.46■□□□□ 0.87
CCHCR1-202ENST00000396263 SLC4A3P48751 1232 aa20.46■□□□□ 0.87
CCHCR1-202ENST00000396263 BCL2L13Q9BXK5 485 aa20.46■□□□□ 0.87
CCHCR1-202ENST00000396263 KIF20BQ96Q89 1820 aa20.45■□□□□ 0.86
CCHCR1-202ENST00000396263 POGKQ9P215 609 aa20.45■□□□□ 0.86
CCHCR1-202ENST00000396263 USP19O94966 1318 aa20.45■□□□□ 0.86
CCHCR1-202ENST00000396263 TMPOP42166 694 aaKnown RBP20.45■□□□□ 0.86
CCHCR1-202ENST00000396263 PNPLA6Q8IY17 1366 aa20.44■□□□□ 0.86
CCHCR1-202ENST00000396263 IL16Q14005 1332 aa20.43■□□□□ 0.86
CCHCR1-202ENST00000396263 U2SURPO15042 1029 aaKnown RBP20.43■□□□□ 0.86
CCHCR1-202ENST00000396263 MVPQ14764 893 aaKnown RBP20.43■□□□□ 0.86
CCHCR1-202ENST00000396263 ZKSCAN2Q63HK3 967 aa20.43■□□□□ 0.86
CCHCR1-202ENST00000396263 LTKP29376 864 aa20.43■□□□□ 0.86
CCHCR1-202ENST00000396263 TRIM35Q9UPQ4 493 aa20.43■□□□□ 0.86
CCHCR1-202ENST00000396263 SLIT1O75093 1534 aa20.42■□□□□ 0.86
CCHCR1-202ENST00000396263 HDGFL2Q7Z4V5 671 aaPredicted RBP20.42■□□□□ 0.86
CCHCR1-202ENST00000396263 ARHGAP23Q9P227 1491 aa20.42■□□□□ 0.86
CCHCR1-202ENST00000396263 METP08581 1390 aa20.42■□□□□ 0.86
CCHCR1-202ENST00000396263 RWDD1Q9H446 243 aaPredicted RBP20.42■□□□□ 0.86
CCHCR1-202ENST00000396263 DLC1Q96QB1 1528 aa20.42■□□□□ 0.86
CCHCR1-202ENST00000396263 HDGFP51858 240 aaKnown RBP20.41■□□□□ 0.86
CCHCR1-202ENST00000396263 NFKBIBQ15653 356 aa20.41■□□□□ 0.86
CCHCR1-202ENST00000396263 CDC42BPGQ6DT37 1551 aa20.41■□□□□ 0.86
CCHCR1-202ENST00000396263 CEP170BQ9Y4F5 1589 aaPredicted RBP20.41■□□□□ 0.86
CCHCR1-202ENST00000396263 DZIP1LQ8IYY4 767 aaKnown RBP20.4■□□□□ 0.86
CCHCR1-202ENST00000396263 TSR2Q969E8 191 aaKnown RBP20.4■□□□□ 0.86
CCHCR1-202ENST00000396263 CDK19Q9BWU1 502 aa20.4■□□□□ 0.86
CCHCR1-202ENST00000396263 ADAMTS13Q76LX8 1427 aa20.39■□□□□ 0.85
CCHCR1-202ENST00000396263 PNNQ9H307 717 aaKnown RBP20.39■□□□□ 0.85
CCHCR1-202ENST00000396263 DIAPH1O60610 1272 aaKnown RBP20.38■□□□□ 0.85
CCHCR1-202ENST00000396263 EXOSC9Q06265 439 aaKnown RBP20.38■□□□□ 0.85
CCHCR1-202ENST00000396263 PDZRN3Q9UPQ7 1066 aa20.38■□□□□ 0.85
CCHCR1-202ENST00000396263 FTSJ3Q8IY81 847 aaKnown RBP20.38■□□□□ 0.85
CCHCR1-202ENST00000396263 PLEKHG1Q9ULL1 1385 aa20.38■□□□□ 0.85
CCHCR1-202ENST00000396263 KNDC1Q76NI1 1749 aa20.37■□□□□ 0.85
CCHCR1-202ENST00000396263 EIF5BO60841 1220 aaKnown RBP20.37■□□□□ 0.85
CCHCR1-202ENST00000396263 SEC24BO95487 1268 aa20.37■□□□□ 0.85
CCHCR1-202ENST00000396263 TXNDC2Q86VQ3 553 aa20.37■□□□□ 0.85
CCHCR1-202ENST00000396263 ATP7BP35670 1465 aa20.37■□□□□ 0.85
CCHCR1-202ENST00000396263 SMC4Q9NTJ3 1288 aa20.36■□□□□ 0.85
CCHCR1-202ENST00000396263 CABP1Q9NZU7 370 aa20.36■□□□□ 0.85
CCHCR1-202ENST00000396263 ZNF142P52746 1687 aaPredicted RBP20.35■□□□□ 0.85
CCHCR1-202ENST00000396263 SSH1Q8WYL5 1049 aa20.35■□□□□ 0.85
CCHCR1-202ENST00000396263 TRIM27P14373 513 aa20.34■□□□□ 0.85
CCHCR1-202ENST00000396263 RIPK4P57078 832 aa20.34■□□□□ 0.85
CCHCR1-202ENST00000396263 LRRC7Q96NW7 1537 aa20.33■□□□□ 0.85
CCHCR1-202ENST00000396263 WAPLQ7Z5K2 1190 aa20.33■□□□□ 0.85
CCHCR1-202ENST00000396263 THEMISQ8N1K5 641 aaPredicted RBP20.33■□□□□ 0.85
CCHCR1-202ENST00000396263 FCHSD2O94868 740 aa20.33■□□□□ 0.84
CCHCR1-202ENST00000396263 GSE1Q14687 1217 aa20.33■□□□□ 0.84
CCHCR1-202ENST00000396263 ATF7IPQ6VMQ6 1270 aa20.33■□□□□ 0.84
CCHCR1-202ENST00000396263 DDX19BQ9UMR2 479 aa20.33■□□□□ 0.84
CCHCR1-202ENST00000396263 EID1Q9Y6B2 187 aa20.33■□□□□ 0.84
CCHCR1-202ENST00000396263 CPS1P31327 1500 aa20.32■□□□□ 0.84
CCHCR1-202ENST00000396263 TECPR2O15040 1411 aa20.31■□□□□ 0.84
CCHCR1-202ENST00000396263 FAM135BQ49AJ0 1406 aa20.31■□□□□ 0.84
CCHCR1-202ENST00000396263 HDAC1Q13547 482 aaPredicted RBP20.31■□□□□ 0.84
CCHCR1-202ENST00000396263 SETD1BQ9UPS6 1966 aaKnown RBP20.31■□□□□ 0.84
CCHCR1-202ENST00000396263 BECN1Q14457 450 aa20.3■□□□□ 0.84
CCHCR1-202ENST00000396263 MAP2P11137 1827 aaKnown RBP20.29■□□□□ 0.84
CCHCR1-202ENST00000396263 KIF16BQ96L93 1317 aa20.29■□□□□ 0.84
CCHCR1-202ENST00000396263 SLC26A8Q96RN1 970 aa20.29■□□□□ 0.84
CCHCR1-202ENST00000396263 UPF2Q9HAU5 1272 aaKnown RBP20.29■□□□□ 0.84
CCHCR1-202ENST00000396263 RSPH6AQ9H0K4 717 aa20.29■□□□□ 0.84
CCHCR1-202ENST00000396263 POLKQ9UBT6 870 aa20.29■□□□□ 0.84
CCHCR1-202ENST00000396263 NOB1Q9ULX3 412 aaKnown RBP20.29■□□□□ 0.84
CCHCR1-202ENST00000396263 ALDH1L2Q3SY69 923 aa20.28■□□□□ 0.84
CCHCR1-202ENST00000396263 TBC1D32Q96NH3 1257 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms