RNA–Protein interactions for RNA: ENST00000395892.5

CLIC1-209, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLIC1, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-209ENST00000395892 WDR43Q15061 677 aaKnown RBP eCLIP17.93■□□□□ 0.461e-7■■■□□ 15.4
CLIC1-209ENST00000395892 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.93■□□□□ 0.46
CLIC1-209ENST00000395892 RGPD8O14715 1765 aaPredicted RBP17.93■□□□□ 0.46
CLIC1-209ENST00000395892 NKTRP30414 1462 aaKnown RBP17.93■□□□□ 0.46
CLIC1-209ENST00000395892 ACEP12821 1306 aa17.93■□□□□ 0.46
CLIC1-209ENST00000395892 SMG6Q86US8 1419 aaKnown RBP17.92■□□□□ 0.46
CLIC1-209ENST00000395892 NUTM2FA1L443 756 aa17.92■□□□□ 0.46
CLIC1-209ENST00000395892 ZRANB1Q9UGI0 708 aa17.92■□□□□ 0.46
CLIC1-209ENST00000395892 ITSN1Q15811 1721 aa17.92■□□□□ 0.46
CLIC1-209ENST00000395892 FMN2Q9NZ56 1722 aa17.92■□□□□ 0.46
CLIC1-209ENST00000395892 NWD1Q149M9 1564 aa17.91■□□□□ 0.46
CLIC1-209ENST00000395892 ANKARQ7Z5J8 1434 aa17.91■□□□□ 0.46
CLIC1-209ENST00000395892 NME9Q86XW9 330 aa17.91■□□□□ 0.46
CLIC1-209ENST00000395892 TTC21BQ7Z4L5 1316 aa17.9■□□□□ 0.46
CLIC1-209ENST00000395892 COL3A1P02461 1466 aaPredicted RBP17.89■□□□□ 0.45
CLIC1-209ENST00000395892 NRKQ7Z2Y5 1582 aa17.89■□□□□ 0.45
CLIC1-209ENST00000395892 PNPLA6Q8IY17 1366 aa17.89■□□□□ 0.45
CLIC1-209ENST00000395892 NALCNQ8IZF0 1738 aa17.89■□□□□ 0.45
CLIC1-209ENST00000395892 RBM33Q96EV2 1170 aaKnown RBP17.88■□□□□ 0.45
CLIC1-209ENST00000395892 USP6P35125 1406 aa17.88■□□□□ 0.45
CLIC1-209ENST00000395892 FBLN1P23142 703 aa17.87■□□□□ 0.45
CLIC1-209ENST00000395892 PDE3BQ13370 1112 aa17.87■□□□□ 0.45
CLIC1-209ENST00000395892 CFAP53Q96M91 514 aa17.87■□□□□ 0.45
CLIC1-209ENST00000395892 POLKQ9UBT6 870 aa17.87■□□□□ 0.45
CLIC1-209ENST00000395892 NUDCQ9Y266 331 aa17.87■□□□□ 0.45
CLIC1-209ENST00000395892 HSPA2P54652 639 aa17.86■□□□□ 0.45
CLIC1-209ENST00000395892 PMFBP1Q8TBY8 1022 aa17.86■□□□□ 0.45
CLIC1-209ENST00000395892 ZNF521Q96K83 1311 aa17.86■□□□□ 0.45
CLIC1-209ENST00000395892 AATKQ6ZMQ8 1374 aa17.86■□□□□ 0.45
CLIC1-209ENST00000395892 ADGRL3Q9HAR2 1447 aa17.86■□□□□ 0.45
CLIC1-209ENST00000395892 SALL2Q9Y467 1007 aaPredicted RBP17.85■□□□□ 0.45
CLIC1-209ENST00000395892 SUPT16HQ9Y5B9 1047 aaKnown RBP17.85■□□□□ 0.45
CLIC1-209ENST00000395892 MAP2P11137 1827 aaKnown RBP17.84■□□□□ 0.45
CLIC1-209ENST00000395892 LMTK3Q96Q04 1460 aa17.84■□□□□ 0.45
CLIC1-209ENST00000395892 CCDC146Q8IYE0 955 aa17.84■□□□□ 0.45
CLIC1-209ENST00000395892 STRCP1A6NGW2 1772 aa17.82■□□□□ 0.44
CLIC1-209ENST00000395892 APAF1O14727 1248 aa17.82■□□□□ 0.44
CLIC1-209ENST00000395892 CDCA7LQ96GN5 454 aa17.82■□□□□ 0.44
CLIC1-209ENST00000395892 COG3Q96JB2 828 aa17.82■□□□□ 0.44
CLIC1-209ENST00000395892 OVOS2A0A0J9YW53 1432 aa17.81■□□□□ 0.44
CLIC1-209ENST00000395892 OVOS2Q6IE36 1432 aa17.81■□□□□ 0.44
CLIC1-209ENST00000395892 USP31Q70CQ4 1352 aa17.81■□□□□ 0.44
CLIC1-209ENST00000395892 TTC21AQ8NDW8 1320 aa17.81■□□□□ 0.44
CLIC1-209ENST00000395892 PROSER2Q86WR7 435 aaPredicted RBP17.81■□□□□ 0.44
CLIC1-209ENST00000395892 NGDNQ8NEJ9 315 aaKnown RBP17.81■□□□□ 0.44
CLIC1-209ENST00000395892 STRCQ7RTU9 1775 aa17.81■□□□□ 0.44
CLIC1-209ENST00000395892 RUNDC1Q96C34 613 aa17.8■□□□□ 0.44
CLIC1-209ENST00000395892 RNF123Q5XPI4 1314 aa17.79■□□□□ 0.44
CLIC1-209ENST00000395892 KCNA4P22459 653 aa17.79■□□□□ 0.44
CLIC1-209ENST00000395892 NGEFQ8N5V2 710 aa17.79■□□□□ 0.44
CLIC1-209ENST00000395892 PHF8Q9UPP1 1060 aa17.79■□□□□ 0.44
CLIC1-209ENST00000395892 DIAPH1O60610 1272 aaKnown RBP17.78■□□□□ 0.44
CLIC1-209ENST00000395892 TRMT2AQ8IZ69 625 aaKnown RBP17.78■□□□□ 0.44
CLIC1-209ENST00000395892 PLEKHF1Q96S99 279 aa17.78■□□□□ 0.44
CLIC1-209ENST00000395892 EMILIN1Q9Y6C2 1016 aa17.78■□□□□ 0.44
CLIC1-209ENST00000395892 FKBP8Q14318 412 aa17.77■□□□□ 0.44
CLIC1-209ENST00000395892 IQSEC2Q5JU85 1478 aa17.76■□□□□ 0.43
CLIC1-209ENST00000395892 NCOA3Q9Y6Q9 1424 aa17.76■□□□□ 0.43
CLIC1-209ENST00000395892 U2AF1L5P0DN76 240 aaPredicted RBP17.76■□□□□ 0.43
CLIC1-209ENST00000395892 IL13P35225 146 aa17.76■□□□□ 0.43
CLIC1-209ENST00000395892 U2AF1Q01081 240 aaKnown RBP eCLIP17.76■□□□□ 0.43
CLIC1-209ENST00000395892 C19orf44Q9H6X5 657 aa17.76■□□□□ 0.43
CLIC1-209ENST00000395892 SLFN5Q08AF3 891 aa17.74■□□□□ 0.43
CLIC1-209ENST00000395892 RRS1Q15050 365 aaKnown RBP17.74■□□□□ 0.43
CLIC1-209ENST00000395892 TCP11L2Q8N4U5 519 aa17.74■□□□□ 0.43
CLIC1-209ENST00000395892 CDK12Q9NYV4 1490 aaPredicted RBP17.74■□□□□ 0.43
CLIC1-209ENST00000395892 PIK3C2AO00443 1686 aa17.74■□□□□ 0.43
CLIC1-209ENST00000395892 USP54Q70EL1 1684 aa17.74■□□□□ 0.43
CLIC1-209ENST00000395892 MARF1Q9Y4F3 1742 aaKnown RBP17.73■□□□□ 0.43
CLIC1-209ENST00000395892 TMEM94Q12767 1356 aa17.72■□□□□ 0.43
CLIC1-209ENST00000395892 GOLGA2Q08379 1002 aa17.72■□□□□ 0.43
CLIC1-209ENST00000395892 DUSP27Q5VZP5 1158 aa17.72■□□□□ 0.43
CLIC1-209ENST00000395892 WWC1Q8IX03 1113 aa17.72■□□□□ 0.43
CLIC1-209ENST00000395892 ORAI2Q96SN7 254 aa17.72■□□□□ 0.43
CLIC1-209ENST00000395892 SPINK5Q9NQ38 1064 aaPredicted RBP17.72■□□□□ 0.43
CLIC1-209ENST00000395892 U2SURPO15042 1029 aaKnown RBP17.71■□□□□ 0.43
CLIC1-209ENST00000395892 PPM1GO15355 546 aaPredicted RBP17.71■□□□□ 0.43
CLIC1-209ENST00000395892 CCDC27Q2M243 656 aa17.71■□□□□ 0.43
CLIC1-209ENST00000395892 ESCO1Q5FWF5 840 aa17.71■□□□□ 0.43
CLIC1-209ENST00000395892 C14orf37Q86TY3 774 aa17.71■□□□□ 0.43
CLIC1-209ENST00000395892 C1orf167Q5SNV9 1468 aa17.7■□□□□ 0.42
CLIC1-209ENST00000395892 PEAK1Q9H792 1746 aa17.7■□□□□ 0.42
CLIC1-209ENST00000395892 FCHSD2O94868 740 aa17.7■□□□□ 0.42
CLIC1-209ENST00000395892 NEFLP07196 543 aa17.69■□□□□ 0.42
CLIC1-209ENST00000395892 RSPH6AQ9H0K4 717 aa17.69■□□□□ 0.42
CLIC1-209ENST00000395892 XIRP1Q702N8 1843 aaKnown RBP17.68■□□□□ 0.42
CLIC1-209ENST00000395892 NLRP6P59044 892 aa17.68■□□□□ 0.42
CLIC1-209ENST00000395892 RRP7AQ9Y3A4 280 aaKnown RBP17.68■□□□□ 0.42
CLIC1-209ENST00000395892 LRRC7Q96NW7 1537 aa17.67■□□□□ 0.42
CLIC1-209ENST00000395892 DCCP43146 1447 aa17.67■□□□□ 0.42
CLIC1-209ENST00000395892 MST1RQ04912 1400 aa17.67■□□□□ 0.42
CLIC1-209ENST00000395892 TMPOP42166 694 aaKnown RBP17.67■□□□□ 0.42
CLIC1-209ENST00000395892 PSME1Q06323 249 aa17.67■□□□□ 0.42
CLIC1-209ENST00000395892 WDR63Q8IWG1 891 aa17.67■□□□□ 0.42
CLIC1-209ENST00000395892 RCAN3Q9UKA8 241 aa17.67■□□□□ 0.42
CLIC1-209ENST00000395892 EIF4A2Q14240 407 aaKnown RBP17.66■□□□□ 0.42
CLIC1-209ENST00000395892 ERICH6BQ5W0A0 696 aa17.66■□□□□ 0.42
CLIC1-209ENST00000395892 ABTB2Q8N961 1025 aa17.66■□□□□ 0.42
CLIC1-209ENST00000395892 PNNQ9H307 717 aaKnown RBP17.66■□□□□ 0.42
CLIC1-209ENST00000395892 MAP3K19Q56UN5 1328 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms