RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 MCM10Q7L590 875 aa18.16■□□□□ 0.5
SREBF1-205ENST00000395757 DDX19BQ9UMR2 479 aa18.16■□□□□ 0.5
SREBF1-205ENST00000395757 PLXNC1O60486 1568 aa18.16■□□□□ 0.5
SREBF1-205ENST00000395757 POLR1AO95602 1720 aaPredicted RBP18.15■□□□□ 0.5
SREBF1-205ENST00000395757 AMPHP49418 695 aa18.15■□□□□ 0.5
SREBF1-205ENST00000395757 AEBP1Q8IUX7 1158 aa18.15■□□□□ 0.5
SREBF1-205ENST00000395757 POLR3AO14802 1390 aaPredicted RBP18.14■□□□□ 0.5
SREBF1-205ENST00000395757 GLIPR1L2Q4G1C9 344 aa18.14■□□□□ 0.49
SREBF1-205ENST00000395757 HSP90AB1P08238 724 aaKnown RBP18.14■□□□□ 0.49
SREBF1-205ENST00000395757 UHRF1BP1LA0JNW5 1464 aa18.13■□□□□ 0.49
SREBF1-205ENST00000395757 ANKRD36BQ8N2N9 1353 aa18.13■□□□□ 0.49
SREBF1-205ENST00000395757 POLKQ9UBT6 870 aa18.13■□□□□ 0.49
SREBF1-205ENST00000395757 RTF1Q92541 710 aaKnown RBP18.12■□□□□ 0.49
SREBF1-205ENST00000395757 TWISTNBQ3B726 338 aaPredicted RBP18.12■□□□□ 0.49
SREBF1-205ENST00000395757 MADDQ8WXG6 1647 aa18.12■□□□□ 0.49
SREBF1-205ENST00000395757 GSE1Q14687 1217 aa18.12■□□□□ 0.49
SREBF1-205ENST00000395757 TRIM35Q9UPQ4 493 aa18.12■□□□□ 0.49
SREBF1-205ENST00000395757 NOL8Q76FK4 1167 aaKnown RBP18.11■□□□□ 0.49
SREBF1-205ENST00000395757 NGEFQ8N5V2 710 aa18.11■□□□□ 0.49
SREBF1-205ENST00000395757 POGZQ7Z3K3 1410 aa18.11■□□□□ 0.49
SREBF1-205ENST00000395757 HSCBQ8IWL3 235 aa18.1■□□□□ 0.49
SREBF1-205ENST00000395757 TRMT2AQ8IZ69 625 aaKnown RBP18.1■□□□□ 0.49
SREBF1-205ENST00000395757 C22orf23Q9BZE7 217 aa18.1■□□□□ 0.49
SREBF1-205ENST00000395757 NCLP19338 710 aaKnown RBP18.09■□□□□ 0.49
SREBF1-205ENST00000395757 ATAD2Q6PL18 1390 aa18.09■□□□□ 0.49
SREBF1-205ENST00000395757 HDGFP51858 240 aaKnown RBP18.09■□□□□ 0.49
SREBF1-205ENST00000395757 FOXD4L5Q5VV16 416 aaPredicted RBP18.09■□□□□ 0.49
SREBF1-205ENST00000395757 FOXD4L4Q8WXT5 416 aaPredicted RBP18.09■□□□□ 0.49
SREBF1-205ENST00000395757 CCDC61Q9Y6R9 512 aa18.08■□□□□ 0.48
SREBF1-205ENST00000395757 WASLO00401 505 aaPredicted RBP18.08■□□□□ 0.48
SREBF1-205ENST00000395757 HSP90AB2PQ58FF8 381 aa18.07■□□□□ 0.48
SREBF1-205ENST00000395757 SPHKAPQ2M3C7 1700 aa18.07■□□□□ 0.48
SREBF1-205ENST00000395757 XPCQ01831 940 aaPredicted RBP18.06■□□□□ 0.48
SREBF1-205ENST00000395757 KDM5AP29375 1690 aaKnown RBP18.06■□□□□ 0.48
SREBF1-205ENST00000395757 NLRP6P59044 892 aa18.06■□□□□ 0.48
SREBF1-205ENST00000395757 C8orf58Q8NAV2 365 aa18.06■□□□□ 0.48
SREBF1-205ENST00000395757 EID1Q9Y6B2 187 aa18.06■□□□□ 0.48
SREBF1-205ENST00000395757 NFE2L2Q16236 605 aa18.05■□□□□ 0.48
SREBF1-205ENST00000395757 FCHSD2O94868 740 aa18.05■□□□□ 0.48
SREBF1-205ENST00000395757 GNAI1P63096 354 aa18.05■□□□□ 0.48
SREBF1-205ENST00000395757 KIF16BQ96L93 1317 aa18.05■□□□□ 0.48
SREBF1-205ENST00000395757 EIF2S2P20042 333 aaKnown RBP18.05■□□□□ 0.48
SREBF1-205ENST00000395757 CLASP1Q7Z460 1538 aa18.05■□□□□ 0.48
SREBF1-205ENST00000395757 MBIPQ9NS73 344 aa18.05■□□□□ 0.48
SREBF1-205ENST00000395757 NPC1L1Q9UHC9 1359 aa18.04■□□□□ 0.48
SREBF1-205ENST00000395757 USHBP1Q8N6Y0 703 aa18.04■□□□□ 0.48
SREBF1-205ENST00000395757 SHROOM2Q13796 1616 aa18.04■□□□□ 0.48
SREBF1-205ENST00000395757 F6X3S4 739 aa18.04■□□□□ 0.48
SREBF1-205ENST00000395757 FOXO3O43524 673 aa18.04■□□□□ 0.48
SREBF1-205ENST00000395757 ZMYND15Q9H091 742 aa18.04■□□□□ 0.48
SREBF1-205ENST00000395757 SMARCA5O60264 1052 aaPredicted RBP18.03■□□□□ 0.48
SREBF1-205ENST00000395757 YTHDC2Q9H6S0 1430 aaKnown RBP18.03■□□□□ 0.48
SREBF1-205ENST00000395757 ABCA6Q8N139 1617 aa18.03■□□□□ 0.48
SREBF1-205ENST00000395757 FOXD4L6Q3SYB3 417 aaPredicted RBP18.03■□□□□ 0.48
SREBF1-205ENST00000395757 FOXD4L3Q6VB84 417 aaPredicted RBP18.03■□□□□ 0.48
SREBF1-205ENST00000395757 CEP152O94986 1710 aa18.02■□□□□ 0.48
SREBF1-205ENST00000395757 TET3O43151 1660 aa18.02■□□□□ 0.48
SREBF1-205ENST00000395757 SYNMO15061 1565 aa18.02■□□□□ 0.48
SREBF1-205ENST00000395757 CALD1Q05682 793 aaKnown RBP18.02■□□□□ 0.47
SREBF1-205ENST00000395757 TSPYL4Q9UJ04 414 aa18.02■□□□□ 0.47
SREBF1-205ENST00000395757 INSRP06213 1382 aa18.02■□□□□ 0.47
SREBF1-205ENST00000395757 TBC1D2Q9BYX2 928 aa18.01■□□□□ 0.47
SREBF1-205ENST00000395757 EFCAB6Q5THR3 1501 aa18.01■□□□□ 0.47
SREBF1-205ENST00000395757 MAP3K4Q9Y6R4 1608 aa18.01■□□□□ 0.47
SREBF1-205ENST00000395757 SLC4A2P04920 1241 aa18.01■□□□□ 0.47
SREBF1-205ENST00000395757 USP35Q9P2H5 1018 aa18■□□□□ 0.47
SREBF1-205ENST00000395757 KIF1BO60333 1816 aa18■□□□□ 0.47
SREBF1-205ENST00000395757 PDIA4P13667 645 aaKnown RBP18■□□□□ 0.47
SREBF1-205ENST00000395757 RNF17Q9BXT8 1623 aaKnown RBP18■□□□□ 0.47
SREBF1-205ENST00000395757 TSHZ3Q63HK5 1081 aa17.99■□□□□ 0.47
SREBF1-205ENST00000395757 CHD1LQ86WJ1 897 aa17.99■□□□□ 0.47
SREBF1-205ENST00000395757 BCL11BQ9C0K0 894 aaPredicted RBP17.99■□□□□ 0.47
SREBF1-205ENST00000395757 C16orf71Q8IYS4 520 aaPredicted RBP17.98■□□□□ 0.47
SREBF1-205ENST00000395757 RSPH6AQ9H0K4 717 aa17.98■□□□□ 0.47
SREBF1-205ENST00000395757 PPRC1Q5VV67 1664 aaKnown RBP17.98■□□□□ 0.47
SREBF1-205ENST00000395757 ACEP12821 1306 aa17.98■□□□□ 0.47
SREBF1-205ENST00000395757 FKBP5Q13451 457 aaPredicted RBP17.97■□□□□ 0.47
SREBF1-205ENST00000395757 LMOD3Q0VAK6 560 aa17.97■□□□□ 0.47
SREBF1-205ENST00000395757 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.97■□□□□ 0.47
SREBF1-205ENST00000395757 TRIM6-TRIM34B2RNG4 842 aa17.97■□□□□ 0.47
SREBF1-205ENST00000395757 PLEKHF1Q96S99 279 aa17.97■□□□□ 0.47
SREBF1-205ENST00000395757 RBM42Q9BTD8 480 aaKnown RBP17.97■□□□□ 0.47
SREBF1-205ENST00000395757 TSPOAP1O95153 1857 aa17.96■□□□□ 0.47
SREBF1-205ENST00000395757 ABTB2Q8N961 1025 aa17.96■□□□□ 0.47
SREBF1-205ENST00000395757 STK31Q9BXU1 1019 aa17.96■□□□□ 0.47
SREBF1-205ENST00000395757 PPIP5K1Q6PFW1 1433 aa17.96■□□□□ 0.47
SREBF1-205ENST00000395757 KLHL34Q8N239 644 aa17.96■□□□□ 0.47
SREBF1-205ENST00000395757 RIMS2Q9UQ26 1411 aa17.95■□□□□ 0.46
SREBF1-205ENST00000395757 MYOM2P54296 1465 aa17.95■□□□□ 0.46
SREBF1-205ENST00000395757 RILPL2Q969X0 211 aa17.95■□□□□ 0.46
SREBF1-205ENST00000395757 AMOTL2Q9Y2J4 779 aa17.95■□□□□ 0.46
SREBF1-205ENST00000395757 VAMP4O75379 141 aa17.95■□□□□ 0.46
SREBF1-205ENST00000395757 CCDC27Q2M243 656 aa17.94■□□□□ 0.46
SREBF1-205ENST00000395757 KIDINS220Q9ULH0 1771 aa17.94■□□□□ 0.46
SREBF1-205ENST00000395757 METP08581 1390 aa17.94■□□□□ 0.46
SREBF1-205ENST00000395757 ABCC3O15438 1527 aa17.93■□□□□ 0.46
SREBF1-205ENST00000395757 OS9Q13438 667 aaPredicted RBP17.93■□□□□ 0.46
SREBF1-205ENST00000395757 EIF4A2Q14240 407 aaKnown RBP17.93■□□□□ 0.46
SREBF1-205ENST00000395757 API5Q9BZZ5 524 aaKnown RBP17.93■□□□□ 0.46
SREBF1-205ENST00000395757 SBNO2Q9Y2G9 1366 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms