RNA–Protein interactions for RNA: ENST00000395466.6

SNCAIP-204, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-204ENST00000395466 SKAP1Q86WV1 359 aa18.02■□□□□ 0.48
SNCAIP-204ENST00000395466 AKAP12Q02952 1782 aa18.02■□□□□ 0.48
SNCAIP-204ENST00000395466 RARSP54136 660 aaKnown RBP18.01■□□□□ 0.47
SNCAIP-204ENST00000395466 TXNDC2Q86VQ3 553 aa18.01■□□□□ 0.47
SNCAIP-204ENST00000395466 BACH2Q9BYV9 841 aa18.01■□□□□ 0.47
SNCAIP-204ENST00000395466 PPIP5K1Q6PFW1 1433 aa18.01■□□□□ 0.47
SNCAIP-204ENST00000395466 ADAMTS13Q76LX8 1427 aa18.01■□□□□ 0.47
SNCAIP-204ENST00000395466 HDGFP51858 240 aaKnown RBP18.01■□□□□ 0.47
SNCAIP-204ENST00000395466 U2SURPO15042 1029 aaKnown RBP18■□□□□ 0.47
SNCAIP-204ENST00000395466 EDC4Q6P2E9 1401 aaKnown RBP18■□□□□ 0.47
SNCAIP-204ENST00000395466 TMPOP42166 694 aaKnown RBP17.99■□□□□ 0.47
SNCAIP-204ENST00000395466 DIAPH1O60610 1272 aaKnown RBP17.99■□□□□ 0.47
SNCAIP-204ENST00000395466 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.99■□□□□ 0.47
SNCAIP-204ENST00000395466 MYH16Q9H6N6 1097 aa17.98■□□□□ 0.47
SNCAIP-204ENST00000395466 TRIM35Q9UPQ4 493 aa17.98■□□□□ 0.47
SNCAIP-204ENST00000395466 ITSN1Q15811 1721 aa17.98■□□□□ 0.47
SNCAIP-204ENST00000395466 POLKQ9UBT6 870 aa17.97■□□□□ 0.47
SNCAIP-204ENST00000395466 C3P01024 1663 aa17.97■□□□□ 0.47
SNCAIP-204ENST00000395466 NUDT16Q96DE0 195 aaKnown RBP17.97■□□□□ 0.47
SNCAIP-204ENST00000395466 LRRC7Q96NW7 1537 aa17.97■□□□□ 0.47
SNCAIP-204ENST00000395466 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.96■□□□□ 0.47
SNCAIP-204ENST00000395466 ANP32AP39687 249 aaKnown RBP17.96■□□□□ 0.47
SNCAIP-204ENST00000395466 PANK1Q8TE04 598 aa17.96■□□□□ 0.47
SNCAIP-204ENST00000395466 ROBO2Q9HCK4 1378 aa17.96■□□□□ 0.47
SNCAIP-204ENST00000395466 FBLN1P23142 703 aa17.95■□□□□ 0.46
SNCAIP-204ENST00000395466 PLEKHG1Q9ULL1 1385 aa17.95■□□□□ 0.46
SNCAIP-204ENST00000395466 TOPAZ1Q8N9V7 1692 aa17.94■□□□□ 0.46
SNCAIP-204ENST00000395466 LTKP29376 864 aa17.94■□□□□ 0.46
SNCAIP-204ENST00000395466 IPO9Q96P70 1041 aaKnown RBP17.94■□□□□ 0.46
SNCAIP-204ENST00000395466 IL16Q14005 1332 aa17.94■□□□□ 0.46
SNCAIP-204ENST00000395466 PRR36Q9H6K5 1346 aa17.94■□□□□ 0.46
SNCAIP-204ENST00000395466 NCKAP5LQ9HCH0 1330 aa17.94■□□□□ 0.46
SNCAIP-204ENST00000395466 MAPK8IP3Q9UPT6 1336 aa17.94■□□□□ 0.46
SNCAIP-204ENST00000395466 COG6Q9Y2V7 657 aa17.93■□□□□ 0.46
SNCAIP-204ENST00000395466 NOP58Q9Y2X3 529 aaKnown RBP17.93■□□□□ 0.46
SNCAIP-204ENST00000395466 CCDC61Q9Y6R9 512 aa17.93■□□□□ 0.46
SNCAIP-204ENST00000395466 AATKQ6ZMQ8 1374 aa17.93■□□□□ 0.46
SNCAIP-204ENST00000395466 ERICH6Q7L0X2 663 aa17.92■□□□□ 0.46
SNCAIP-204ENST00000395466 NME9Q86XW9 330 aa17.92■□□□□ 0.46
SNCAIP-204ENST00000395466 CDK12Q9NYV4 1490 aaPredicted RBP17.92■□□□□ 0.46
SNCAIP-204ENST00000395466 FCHSD2O94868 740 aa17.92■□□□□ 0.46
SNCAIP-204ENST00000395466 CT47B1P0C2W7 299 aaPredicted RBP17.92■□□□□ 0.46
SNCAIP-204ENST00000395466 CANXP27824 592 aaKnown RBP17.92■□□□□ 0.46
SNCAIP-204ENST00000395466 CLUAP1Q96AJ1 413 aa17.92■□□□□ 0.46
SNCAIP-204ENST00000395466 RSPH6AQ9H0K4 717 aa17.92■□□□□ 0.46
SNCAIP-204ENST00000395466 NRKQ7Z2Y5 1582 aa17.91■□□□□ 0.46
SNCAIP-204ENST00000395466 PAK3O75914 559 aaPredicted RBP17.91■□□□□ 0.46
SNCAIP-204ENST00000395466 IGHDP01880 384 aa17.91■□□□□ 0.46
SNCAIP-204ENST00000395466 RLBP1P12271 317 aa17.91■□□□□ 0.46
SNCAIP-204ENST00000395466 FRAT1Q92837 279 aaPredicted RBP17.91■□□□□ 0.46
SNCAIP-204ENST00000395466 PNNQ9H307 717 aaKnown RBP17.91■□□□□ 0.46
SNCAIP-204ENST00000395466 ZRANB1Q9UGI0 708 aa17.91■□□□□ 0.46
SNCAIP-204ENST00000395466 TNNQ9UQP3 1299 aa17.91■□□□□ 0.46
SNCAIP-204ENST00000395466 ARHGAP23Q9P227 1491 aa17.91■□□□□ 0.46
SNCAIP-204ENST00000395466 SLIT1O75093 1534 aa17.91■□□□□ 0.46
SNCAIP-204ENST00000395466 FER1L4A9Z1Z3 1794 aa17.91■□□□□ 0.46
SNCAIP-204ENST00000395466 TSR2Q969E8 191 aaKnown RBP17.9■□□□□ 0.46
SNCAIP-204ENST00000395466 PTPRUQ92729 1446 aa17.9■□□□□ 0.46
SNCAIP-204ENST00000395466 CEBPAP49715 358 aaPredicted RBP17.9■□□□□ 0.46
SNCAIP-204ENST00000395466 RIPK4P57078 832 aa17.9■□□□□ 0.46
SNCAIP-204ENST00000395466 BCL2L13Q9BXK5 485 aa17.9■□□□□ 0.46
SNCAIP-204ENST00000395466 EMILIN1Q9Y6C2 1016 aa17.89■□□□□ 0.45
SNCAIP-204ENST00000395466 EXOSC9Q06265 439 aaKnown RBP17.88■□□□□ 0.45
SNCAIP-204ENST00000395466 AAMPQ13685 434 aa17.88■□□□□ 0.45
SNCAIP-204ENST00000395466 IL13P35225 146 aa17.87■□□□□ 0.45
SNCAIP-204ENST00000395466 PPM1GO15355 546 aaPredicted RBP17.86■□□□□ 0.45
SNCAIP-204ENST00000395466 PRKAR2BP31323 418 aa17.86■□□□□ 0.45
SNCAIP-204ENST00000395466 ZNF692Q9BU19 519 aaPredicted RBP17.86■□□□□ 0.45
SNCAIP-204ENST00000395466 DLG5Q8TDM6 1919 aa17.86■□□□□ 0.45
SNCAIP-204ENST00000395466 VIRMAQ69YN4 1812 aaKnown RBP17.85■□□□□ 0.45
SNCAIP-204ENST00000395466 COG3Q96JB2 828 aa17.85■□□□□ 0.45
SNCAIP-204ENST00000395466 C8orf34Q49A92 452 aa17.84■□□□□ 0.45
SNCAIP-204ENST00000395466 NPM2Q86SE8 214 aaKnown RBP17.84■□□□□ 0.45
SNCAIP-204ENST00000395466 NALCNQ8IZF0 1738 aa17.84■□□□□ 0.45
SNCAIP-204ENST00000395466 PHACTR3Q96KR7 559 aa17.84■□□□□ 0.45
SNCAIP-204ENST00000395466 PLEKHG3A1L390 1219 aa17.83■□□□□ 0.44
SNCAIP-204ENST00000395466 ZKSCAN2Q63HK3 967 aa17.83■□□□□ 0.44
SNCAIP-204ENST00000395466 SSH1Q8WYL5 1049 aa17.83■□□□□ 0.44
SNCAIP-204ENST00000395466 PCDHB15Q9Y5E8 787 aa17.83■□□□□ 0.44
SNCAIP-204ENST00000395466 HMOX1P09601 288 aa17.82■□□□□ 0.44
SNCAIP-204ENST00000395466 NFE2L2Q16236 605 aa17.82■□□□□ 0.44
SNCAIP-204ENST00000395466 FAM161AQ3B820 660 aa17.82■□□□□ 0.44
SNCAIP-204ENST00000395466 SLC26A8Q96RN1 970 aa17.82■□□□□ 0.44
SNCAIP-204ENST00000395466 RGS3P49796 1198 aa17.82■□□□□ 0.44
SNCAIP-204ENST00000395466 ZBTB47Q9UFB7 747 aaPredicted RBP17.82■□□□□ 0.44
SNCAIP-204ENST00000395466 EID1Q9Y6B2 187 aa17.82■□□□□ 0.44
SNCAIP-204ENST00000395466 OVOS2A0A0J9YW53 1432 aa17.81■□□□□ 0.44
SNCAIP-204ENST00000395466 OVOS2Q6IE36 1432 aa17.81■□□□□ 0.44
SNCAIP-204ENST00000395466 DIP2AQ14689 1571 aa17.81■□□□□ 0.44
SNCAIP-204ENST00000395466 TTC21BQ7Z4L5 1316 aa17.81■□□□□ 0.44
SNCAIP-204ENST00000395466 MVPQ14764 893 aaKnown RBP17.81■□□□□ 0.44
SNCAIP-204ENST00000395466 RRS1Q15050 365 aaKnown RBP17.81■□□□□ 0.44
SNCAIP-204ENST00000395466 SMC4Q9NTJ3 1288 aa17.81■□□□□ 0.44
SNCAIP-204ENST00000395466 PTCH1Q13635 1447 aa17.81■□□□□ 0.44
SNCAIP-204ENST00000395466 ACEP12821 1306 aa17.8■□□□□ 0.44
SNCAIP-204ENST00000395466 USP6P35125 1406 aa17.8■□□□□ 0.44
SNCAIP-204ENST00000395466 DZIP1LQ8IYY4 767 aaKnown RBP17.8■□□□□ 0.44
SNCAIP-204ENST00000395466 PMFBP1Q8TBY8 1022 aa17.8■□□□□ 0.44
SNCAIP-204ENST00000395466 TBX22Q9Y458 520 aa17.8■□□□□ 0.44
SNCAIP-204ENST00000395466 XRN1Q8IZH2 1706 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms