RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 ROBO1Q9Y6N7 1651 aa26.05■■□□□ 1.76
LMNB1-202ENST00000395354 CARD14Q9BXL6 1004 aa26.04■■□□□ 1.76
LMNB1-202ENST00000395354 NPHP3Q7Z494 1330 aa26.04■■□□□ 1.76
LMNB1-202ENST00000395354 XPCQ01831 940 aaPredicted RBP26.03■■□□□ 1.76
LMNB1-202ENST00000395354 CNGB1Q14028 1251 aaPredicted RBP26.03■■□□□ 1.76
LMNB1-202ENST00000395354 AMER1Q5JTC6 1135 aaPredicted RBP26.03■■□□□ 1.76
LMNB1-202ENST00000395354 KRT28Q7Z3Y7 464 aa26.03■■□□□ 1.76
LMNB1-202ENST00000395354 FAM9BQ8IZU0 186 aa26.03■■□□□ 1.76
LMNB1-202ENST00000395354 HNRNPUQ00839 825 aaKnown RBP eCLIP26.02■■□□□ 1.76
LMNB1-202ENST00000395354 AKAP12Q02952 1782 aa26.01■■□□□ 1.75
LMNB1-202ENST00000395354 CC2D1BQ5T0F9 858 aaKnown RBP26.01■■□□□ 1.75
LMNB1-202ENST00000395354 GTF3C3Q9Y5Q9 886 aa26.01■■□□□ 1.75
LMNB1-202ENST00000395354 PNISRQ8TF01 805 aaKnown RBP26■■□□□ 1.75
LMNB1-202ENST00000395354 USP6P35125 1406 aa26■■□□□ 1.75
LMNB1-202ENST00000395354 PAK3O75914 559 aaPredicted RBP25.97■■□□□ 1.75
LMNB1-202ENST00000395354 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.97■■□□□ 1.75
LMNB1-202ENST00000395354 SOS2Q07890 1332 aaPredicted RBP25.96■■□□□ 1.75
LMNB1-202ENST00000395354 NSD3Q9BZ95 1437 aa25.96■■□□□ 1.75
LMNB1-202ENST00000395354 MON2Q7Z3U7 1717 aa25.96■■□□□ 1.75
LMNB1-202ENST00000395354 TTC21BQ7Z4L5 1316 aa25.96■■□□□ 1.75
LMNB1-202ENST00000395354 EDC4Q6P2E9 1401 aaKnown RBP25.95■■□□□ 1.75
LMNB1-202ENST00000395354 PXDNQ92626 1479 aa25.95■■□□□ 1.74
LMNB1-202ENST00000395354 NHSL1Q5SYE7 1610 aa25.95■■□□□ 1.74
LMNB1-202ENST00000395354 SSH2Q76I76 1423 aa25.94■■□□□ 1.74
LMNB1-202ENST00000395354 AHDC1Q5TGY3 1603 aaPredicted RBP25.92■■□□□ 1.74
LMNB1-202ENST00000395354 TTC21AQ8NDW8 1320 aa25.92■■□□□ 1.74
LMNB1-202ENST00000395354 INSRP06213 1382 aa25.91■■□□□ 1.74
LMNB1-202ENST00000395354 ZBED9Q6R2W3 1325 aa25.91■■□□□ 1.74
LMNB1-202ENST00000395354 SBNO1A3KN83 1393 aa25.9■■□□□ 1.74
LMNB1-202ENST00000395354 CGNL1Q0VF96 1302 aa25.9■■□□□ 1.74
LMNB1-202ENST00000395354 LMOD2Q6P5Q4 547 aa25.9■■□□□ 1.74
LMNB1-202ENST00000395354 ABTB2Q8N961 1025 aa25.9■■□□□ 1.74
LMNB1-202ENST00000395354 FYB1O15117 783 aa25.89■■□□□ 1.73
LMNB1-202ENST00000395354 NME9Q86XW9 330 aa25.89■■□□□ 1.73
LMNB1-202ENST00000395354 LRRC59Q96AG4 307 aaKnown RBP25.89■■□□□ 1.73
LMNB1-202ENST00000395354 SPATA31A3Q5VYP0 1347 aa25.89■■□□□ 1.73
LMNB1-202ENST00000395354 NRKQ7Z2Y5 1582 aa25.88■■□□□ 1.73
LMNB1-202ENST00000395354 PHLPP1O60346 1717 aa25.88■■□□□ 1.73
LMNB1-202ENST00000395354 TRPM3Q9HCF6 1732 aaPredicted RBP25.88■■□□□ 1.73
LMNB1-202ENST00000395354 PPP2R1AP30153 589 aa25.87■■□□□ 1.73
LMNB1-202ENST00000395354 FBXO41Q8TF61 875 aa25.87■■□□□ 1.73
LMNB1-202ENST00000395354 NUTM2GQ5VZR2 741 aa25.86■■□□□ 1.73
LMNB1-202ENST00000395354 TNS3Q68CZ2 1445 aa25.85■■□□□ 1.73
LMNB1-202ENST00000395354 HSPA1LP34931 641 aa25.85■■□□□ 1.73
LMNB1-202ENST00000395354 GGNBP2Q9H3C7 697 aa25.85■■□□□ 1.73
LMNB1-202ENST00000395354 NLRP6P59044 892 aa25.84■■□□□ 1.73
LMNB1-202ENST00000395354 ZRANB1Q9UGI0 708 aa25.84■■□□□ 1.73
LMNB1-202ENST00000395354 NSD2O96028 1365 aa25.83■■□□□ 1.73
LMNB1-202ENST00000395354 COL16A1Q07092 1604 aaPredicted RBP25.82■■□□□ 1.72
LMNB1-202ENST00000395354 ARHGEF10O15013 1369 aa25.81■■□□□ 1.72
LMNB1-202ENST00000395354 ALS2Q96Q42 1657 aa25.81■■□□□ 1.72
LMNB1-202ENST00000395354 COG3Q96JB2 828 aa25.8■■□□□ 1.72
LMNB1-202ENST00000395354 PIK3C2AO00443 1686 aa25.79■■□□□ 1.72
LMNB1-202ENST00000395354 USP31Q70CQ4 1352 aa25.79■■□□□ 1.72
LMNB1-202ENST00000395354 KIF20BQ96Q89 1820 aa25.78■■□□□ 1.72
LMNB1-202ENST00000395354 PLEKHG5O94827 1062 aa25.78■■□□□ 1.72
LMNB1-202ENST00000395354 MORC1Q86VD1 984 aa25.77■■□□□ 1.72
LMNB1-202ENST00000395354 CABLES1Q8TDN4 633 aa25.74■■□□□ 1.71
LMNB1-202ENST00000395354 PNPLA6Q8IY17 1366 aa25.74■■□□□ 1.71
LMNB1-202ENST00000395354 OVOS2A0A0J9YW53 1432 aa25.73■■□□□ 1.71
LMNB1-202ENST00000395354 OVOS2Q6IE36 1432 aa25.73■■□□□ 1.71
LMNB1-202ENST00000395354 BLMP54132 1417 aaPredicted RBP25.73■■□□□ 1.71
LMNB1-202ENST00000395354 JCADQ9P266 1359 aa25.72■■□□□ 1.71
LMNB1-202ENST00000395354 USP19O94966 1318 aa25.71■■□□□ 1.71
LMNB1-202ENST00000395354 TNNT2P45379 298 aaPredicted RBP25.71■■□□□ 1.71
LMNB1-202ENST00000395354 SOX12O15370 315 aa25.7■■□□□ 1.71
LMNB1-202ENST00000395354 GCP02774 474 aa25.7■■□□□ 1.71
LMNB1-202ENST00000395354 KCNH5Q8NCM2 988 aa25.69■■□□□ 1.7
LMNB1-202ENST00000395354 ANKRD26Q9UPS8 1709 aa25.69■■□□□ 1.7
LMNB1-202ENST00000395354 USP54Q70EL1 1684 aa25.69■■□□□ 1.7
LMNB1-202ENST00000395354 MARF1Q9Y4F3 1742 aaKnown RBP25.69■■□□□ 1.7
LMNB1-202ENST00000395354 MED1Q15648 1581 aaPredicted RBP25.68■■□□□ 1.7
LMNB1-202ENST00000395354 FBLN1P23142 703 aa25.68■■□□□ 1.7
LMNB1-202ENST00000395354 HAP1P54257 671 aaPredicted RBP25.68■■□□□ 1.7
LMNB1-202ENST00000395354 WDR43Q15061 677 aaKnown RBP eCLIP25.67■■□□□ 1.76e-11■■■□□ 18.3
LMNB1-202ENST00000395354 COL22A1Q8NFW1 1626 aaPredicted RBP25.66■■□□□ 1.7
LMNB1-202ENST00000395354 SHPRHQ149N8 1683 aa25.65■■□□□ 1.7
LMNB1-202ENST00000395354 SLIT3O75094 1523 aa25.65■■□□□ 1.7
LMNB1-202ENST00000395354 SMG6Q86US8 1419 aaKnown RBP25.64■■□□□ 1.7
LMNB1-202ENST00000395354 NUTM2BA6NNL0 878 aaPredicted RBP25.63■■□□□ 1.69
LMNB1-202ENST00000395354 NUTM2EB1AL46 878 aaPredicted RBP25.63■■□□□ 1.69
LMNB1-202ENST00000395354 ZC3H6P61129 1189 aaKnown RBP25.63■■□□□ 1.69
LMNB1-202ENST00000395354 NUTM2AQ8IVF1 878 aaPredicted RBP25.63■■□□□ 1.69
LMNB1-202ENST00000395354 ADAMTS8Q9UP79 889 aa25.62■■□□□ 1.69
LMNB1-202ENST00000395354 CRYBG1Q9Y4K1 1723 aa25.62■■□□□ 1.69
LMNB1-202ENST00000395354 SPATA31A6Q5VVP1 1343 aa25.61■■□□□ 1.69
LMNB1-202ENST00000395354 AATKQ6ZMQ8 1374 aa25.61■■□□□ 1.69
LMNB1-202ENST00000395354 PHRF1Q9P1Y6 1649 aaKnown RBP25.61■■□□□ 1.69
LMNB1-202ENST00000395354 RRS1Q15050 365 aaKnown RBP25.61■■□□□ 1.69
LMNB1-202ENST00000395354 NFAT5O94916 1531 aa25.59■■□□□ 1.69
LMNB1-202ENST00000395354 PDE3BQ13370 1112 aa25.59■■□□□ 1.69
LMNB1-202ENST00000395354 POLKQ9UBT6 870 aa25.59■■□□□ 1.69
LMNB1-202ENST00000395354 ZBTB7CA1YPR0 619 aa25.58■■□□□ 1.69
LMNB1-202ENST00000395354 NEFLP07196 543 aa25.58■■□□□ 1.69
LMNB1-202ENST00000395354 ARHGEF25Q86VW2 580 aa25.58■■□□□ 1.69
LMNB1-202ENST00000395354 ABCA3Q99758 1704 aa25.58■■□□□ 1.69
LMNB1-202ENST00000395354 MAP2P11137 1827 aaKnown RBP25.57■■□□□ 1.68
LMNB1-202ENST00000395354 MAP3K19Q56UN5 1328 aa25.57■■□□□ 1.68
LMNB1-202ENST00000395354 PPM1GO15355 546 aaPredicted RBP25.56■■□□□ 1.68
LMNB1-202ENST00000395354 ADAMTS2O95450 1211 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms