RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 TMF1P82094 1093 aa11.76□□□□□ -0.53
HERC4-203ENST00000395185 C8orf37Q96NL8 207 aa11.76□□□□□ -0.53
HERC4-203ENST00000395185 AHDC1Q5TGY3 1603 aaPredicted RBP11.75□□□□□ -0.53
HERC4-203ENST00000395185 PLEKHG3A1L390 1219 aa11.75□□□□□ -0.53
HERC4-203ENST00000395185 CABP2Q9NPB3 220 aa11.75□□□□□ -0.53
HERC4-203ENST00000395185 SPATA31A3Q5VYP0 1347 aa11.75□□□□□ -0.53
HERC4-203ENST00000395185 PNPLA6Q8IY17 1366 aa11.75□□□□□ -0.53
HERC4-203ENST00000395185 CDC42BPGQ6DT37 1551 aa11.75□□□□□ -0.53
HERC4-203ENST00000395185 MKRN4PQ13434 485 aaPredicted RBP11.74□□□□□ -0.53
HERC4-203ENST00000395185 CDCA8Q53HL2 280 aa11.74□□□□□ -0.53
HERC4-203ENST00000395185 RGS17Q9UGC6 210 aaPredicted RBP11.74□□□□□ -0.53
HERC4-203ENST00000395185 SBNO1A3KN83 1393 aa11.73□□□□□ -0.53
HERC4-203ENST00000395185 PHLPP1O60346 1717 aa11.73□□□□□ -0.53
HERC4-203ENST00000395185 DDX10Q13206 875 aaKnown RBP11.73□□□□□ -0.53
HERC4-203ENST00000395185 PRR36Q9H6K5 1346 aa11.73□□□□□ -0.53
HERC4-203ENST00000395185 MED1Q15648 1581 aaPredicted RBP11.72□□□□□ -0.53
HERC4-203ENST00000395185 ARHGEF10O15013 1369 aa11.72□□□□□ -0.53
HERC4-203ENST00000395185 PLEKHG5O94827 1062 aa11.72□□□□□ -0.53
HERC4-203ENST00000395185 RXRBP28702 533 aa11.72□□□□□ -0.53
HERC4-203ENST00000395185 DIEXFQ68CQ4 756 aaKnown RBP11.72□□□□□ -0.53
HERC4-203ENST00000395185 ZNF692Q9BU19 519 aaPredicted RBP11.72□□□□□ -0.53
HERC4-203ENST00000395185 QTRT2Q9H974 415 aaKnown RBP11.72□□□□□ -0.53
HERC4-203ENST00000395185 CABP1Q9NZU7 370 aa11.72□□□□□ -0.53
HERC4-203ENST00000395185 ACEP12821 1306 aa11.71□□□□□ -0.53
HERC4-203ENST00000395185 AFF2P51816 1311 aa11.71□□□□□ -0.53
HERC4-203ENST00000395185 PER1O15534 1290 aaPredicted RBP11.71□□□□□ -0.53
HERC4-203ENST00000395185 POTEAQ6S8J7 498 aa11.71□□□□□ -0.53
HERC4-203ENST00000395185 USP21Q9UK80 565 aa11.71□□□□□ -0.53
HERC4-203ENST00000395185 NALCNQ8IZF0 1738 aa11.71□□□□□ -0.54
HERC4-203ENST00000395185 KNDC1Q76NI1 1749 aa11.7□□□□□ -0.54
HERC4-203ENST00000395185 ARHGEF28Q8N1W1 1705 aaKnown RBP11.7□□□□□ -0.54
HERC4-203ENST00000395185 COL16A1Q07092 1604 aaPredicted RBP11.69□□□□□ -0.54
HERC4-203ENST00000395185 FNBP4Q8N3X1 1017 aaPredicted RBP11.69□□□□□ -0.54
HERC4-203ENST00000395185 ABTB2Q8N961 1025 aa11.69□□□□□ -0.54
HERC4-203ENST00000395185 TRPC5Q9UL62 973 aaPredicted RBP11.69□□□□□ -0.54
HERC4-203ENST00000395185 RBM6P78332 1123 aaKnown RBP11.68□□□□□ -0.54
HERC4-203ENST00000395185 NLRP13Q86W25 1043 aa11.68□□□□□ -0.54
HERC4-203ENST00000395185 TMC1Q8TDI8 760 aa11.68□□□□□ -0.54
HERC4-203ENST00000395185 CABLES1Q8TDN4 633 aa11.68□□□□□ -0.54
HERC4-203ENST00000395185 TULP4Q9NRJ4 1543 aa11.67□□□□□ -0.54
HERC4-203ENST00000395185 PXDNQ92626 1479 aa11.67□□□□□ -0.54
HERC4-203ENST00000395185 ATAD2Q6PL18 1390 aa11.67□□□□□ -0.54
HERC4-203ENST00000395185 HDGFL2Q7Z4V5 671 aaPredicted RBP11.66□□□□□ -0.54
HERC4-203ENST00000395185 TERF2IPQ9NYB0 399 aa11.66□□□□□ -0.54
HERC4-203ENST00000395185 TNS3Q68CZ2 1445 aa11.66□□□□□ -0.54
HERC4-203ENST00000395185 BRD4O60885 1362 aaPredicted RBP11.66□□□□□ -0.54
HERC4-203ENST00000395185 UNC5CLQ8IV45 518 aa11.65□□□□□ -0.54
HERC4-203ENST00000395185 PPIP5K1Q6PFW1 1433 aa11.65□□□□□ -0.54
HERC4-203ENST00000395185 POLR3AO14802 1390 aaPredicted RBP11.65□□□□□ -0.55
HERC4-203ENST00000395185 ADGRB2O60241 1585 aa11.64□□□□□ -0.55
HERC4-203ENST00000395185 NLRP6P59044 892 aa11.64□□□□□ -0.55
HERC4-203ENST00000395185 NUTM2GQ5VZR2 741 aa11.64□□□□□ -0.55
HERC4-203ENST00000395185 CARD14Q9BXL6 1004 aa11.64□□□□□ -0.55
HERC4-203ENST00000395185 SLC12A5Q9H2X9 1139 aa11.64□□□□□ -0.55
HERC4-203ENST00000395185 PANK3Q9H999 370 aa11.64□□□□□ -0.55
HERC4-203ENST00000395185 CCDC9Q9Y3X0 531 aaKnown RBP11.64□□□□□ -0.55
HERC4-203ENST00000395185 NINLQ9Y2I6 1382 aa11.64□□□□□ -0.55
HERC4-203ENST00000395185 LRP6O75581 1613 aa11.64□□□□□ -0.55
HERC4-203ENST00000395185 NHSL1Q5SYE7 1610 aa11.64□□□□□ -0.55
HERC4-203ENST00000395185 QRICH2Q9H0J4 1663 aa11.63□□□□□ -0.55
HERC4-203ENST00000395185 FAM83GA6ND36 823 aa11.63□□□□□ -0.55
HERC4-203ENST00000395185 SPDYE2BA6NHP3 402 aa11.63□□□□□ -0.55
HERC4-203ENST00000395185 SPDYE6P0CI01 402 aa11.63□□□□□ -0.55
HERC4-203ENST00000395185 EVA1CP58658 441 aa11.63□□□□□ -0.55
HERC4-203ENST00000395185 SPDYE2Q495Y8 402 aa11.63□□□□□ -0.55
HERC4-203ENST00000395185 PRDM11Q9NQV5 511 aa11.63□□□□□ -0.55
HERC4-203ENST00000395185 FMN2Q9NZ56 1722 aa11.63□□□□□ -0.55
HERC4-203ENST00000395185 GJD4Q96KN9 370 aaPredicted RBP11.62□□□□□ -0.55
HERC4-203ENST00000395185 ATP7BP35670 1465 aa11.62□□□□□ -0.55
HERC4-203ENST00000395185 KIF1AQ12756 1690 aa11.62□□□□□ -0.55
HERC4-203ENST00000395185 NPC1L1Q9UHC9 1359 aa11.61□□□□□ -0.55
HERC4-203ENST00000395185 SHPRHQ149N8 1683 aa11.61□□□□□ -0.55
HERC4-203ENST00000395185 TTC21AQ8NDW8 1320 aa11.6□□□□□ -0.55
HERC4-203ENST00000395185 GCP02774 474 aa11.6□□□□□ -0.55
HERC4-203ENST00000395185 ZC3H6P61129 1189 aaKnown RBP11.6□□□□□ -0.55
HERC4-203ENST00000395185 AMER1Q5JTC6 1135 aaPredicted RBP11.6□□□□□ -0.55
HERC4-203ENST00000395185 MIER1Q8N108 512 aa11.6□□□□□ -0.55
HERC4-203ENST00000395185 KCNH5Q8NCM2 988 aa11.6□□□□□ -0.55
HERC4-203ENST00000395185 AKT1S1Q96B36 256 aa11.6□□□□□ -0.55
HERC4-203ENST00000395185 BTG4Q9NY30 223 aa11.6□□□□□ -0.55
HERC4-203ENST00000395185 TTC21BQ7Z4L5 1316 aa11.6□□□□□ -0.55
HERC4-203ENST00000395185 CD163L1Q9NR16 1453 aa11.59□□□□□ -0.55
HERC4-203ENST00000395185 KTN1Q86UP2 1357 aaKnown RBP11.59□□□□□ -0.55
HERC4-203ENST00000395185 ANKRD36BQ8N2N9 1353 aa11.59□□□□□ -0.55
HERC4-203ENST00000395185 VPS72Q15906 364 aa11.59□□□□□ -0.55
HERC4-203ENST00000395185 POLR3GLQ9BT43 218 aa11.59□□□□□ -0.55
HERC4-203ENST00000395185 CPSF1Q10570 1443 aaKnown RBP11.59□□□□□ -0.55
HERC4-203ENST00000395185 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.58□□□□□ -0.56
HERC4-203ENST00000395185 PRKRIP1Q9H875 184 aaPredicted RBP11.58□□□□□ -0.56
HERC4-203ENST00000395185 ZBTB7CA1YPR0 619 aa11.57□□□□□ -0.56
HERC4-203ENST00000395185 A0A0G2JS52 829 aa11.56□□□□□ -0.56
HERC4-203ENST00000395185 USP6P35125 1406 aa11.56□□□□□ -0.56
HERC4-203ENST00000395185 MYT1Q01538 1121 aa11.56□□□□□ -0.56
HERC4-203ENST00000395185 CHRNA2Q15822 529 aa11.56□□□□□ -0.56
HERC4-203ENST00000395185 STRN4Q9NRL3 753 aa11.56□□□□□ -0.56
HERC4-203ENST00000395185 MYOM1P52179 1685 aa11.55□□□□□ -0.56
HERC4-203ENST00000395185 KNSTRNQ9Y448 316 aa11.55□□□□□ -0.56
HERC4-203ENST00000395185 BCL9LQ86UU0 1499 aa11.55□□□□□ -0.56
HERC4-203ENST00000395185 A0A1W2PP64 1363 aa11.54□□□□□ -0.56
HERC4-203ENST00000395185 KIAA0232Q92628 1395 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms