RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 CABP1Q9NZU7 370 aa24.25■■□□□ 1.47
SIL1-202ENST00000394817 ZNF142P52746 1687 aaPredicted RBP24.24■■□□□ 1.47
SIL1-202ENST00000394817 ROBO2Q9HCK4 1378 aa24.24■■□□□ 1.47
SIL1-202ENST00000394817 CDC42BPGQ6DT37 1551 aa24.23■■□□□ 1.47
SIL1-202ENST00000394817 U2AF1L5P0DN76 240 aaPredicted RBP24.23■■□□□ 1.47
SIL1-202ENST00000394817 U2AF1Q01081 240 aaKnown RBP eCLIP24.23■■□□□ 1.47
SIL1-202ENST00000394817 RRP7AQ9Y3A4 280 aaKnown RBP24.23■■□□□ 1.47
SIL1-202ENST00000394817 MON2Q7Z3U7 1717 aa24.23■■□□□ 1.47
SIL1-202ENST00000394817 PTPRUQ92729 1446 aa24.23■■□□□ 1.47
SIL1-202ENST00000394817 KDM2BQ8NHM5 1336 aa24.22■■□□□ 1.47
SIL1-202ENST00000394817 PNPLA6Q8IY17 1366 aa24.22■■□□□ 1.47
SIL1-202ENST00000394817 NEUROD2Q15784 382 aa24.21■■□□□ 1.47
SIL1-202ENST00000394817 SIRT1Q96EB6 747 aa24.21■■□□□ 1.47
SIL1-202ENST00000394817 AKAP12Q02952 1782 aa24.21■■□□□ 1.47
SIL1-202ENST00000394817 CPSF1Q10570 1443 aaKnown RBP24.2■■□□□ 1.46
SIL1-202ENST00000394817 BCAR3O75815 825 aa24.2■■□□□ 1.46
SIL1-202ENST00000394817 MS4A1P11836 297 aa24.2■■□□□ 1.46
SIL1-202ENST00000394817 ITSN1Q15811 1721 aa24.19■■□□□ 1.46
SIL1-202ENST00000394817 MAP2P11137 1827 aaKnown RBP24.19■■□□□ 1.46
SIL1-202ENST00000394817 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.18■■□□□ 1.46
SIL1-202ENST00000394817 WASLO00401 505 aaPredicted RBP24.18■■□□□ 1.46
SIL1-202ENST00000394817 EDC4Q6P2E9 1401 aaKnown RBP24.18■■□□□ 1.46
SIL1-202ENST00000394817 PPIP5K1Q6PFW1 1433 aa24.17■■□□□ 1.46
SIL1-202ENST00000394817 DIP2AQ14689 1571 aa24.17■■□□□ 1.46
SIL1-202ENST00000394817 CENPQQ7L2Z9 268 aaPredicted RBP24.17■■□□□ 1.46
SIL1-202ENST00000394817 PLEKHF1Q96S99 279 aa24.16■■□□□ 1.46
SIL1-202ENST00000394817 SETD1BQ9UPS6 1966 aaKnown RBP24.15■■□□□ 1.46
SIL1-202ENST00000394817 PDE3AQ14432 1141 aa24.15■■□□□ 1.46
SIL1-202ENST00000394817 TBX22Q9Y458 520 aa24.15■■□□□ 1.46
SIL1-202ENST00000394817 U2SURPO15042 1029 aaKnown RBP24.13■■□□□ 1.45
SIL1-202ENST00000394817 MYH16Q9H6N6 1097 aa24.12■■□□□ 1.45
SIL1-202ENST00000394817 AMOTL2Q9Y2J4 779 aa24.12■■□□□ 1.45
SIL1-202ENST00000394817 LRRC7Q96NW7 1537 aa24.12■■□□□ 1.45
SIL1-202ENST00000394817 DIAPH1O60610 1272 aaKnown RBP24.12■■□□□ 1.45
SIL1-202ENST00000394817 TOPAZ1Q8N9V7 1692 aa24.11■■□□□ 1.45
SIL1-202ENST00000394817 XRN1Q8IZH2 1706 aaKnown RBP24.11■■□□□ 1.45
SIL1-202ENST00000394817 RARSP54136 660 aaKnown RBP24.11■■□□□ 1.45
SIL1-202ENST00000394817 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.1■■□□□ 1.458e-7■■■■□ 23.2
SIL1-202ENST00000394817 NCKAP5LQ9HCH0 1330 aa24.1■■□□□ 1.45
SIL1-202ENST00000394817 MAPK8IP3Q9UPT6 1336 aa24.09■■□□□ 1.45
SIL1-202ENST00000394817 TMPOP42166 694 aaKnown RBP24.09■■□□□ 1.45
SIL1-202ENST00000394817 PDE4AP27815 886 aa24.08■■□□□ 1.45
SIL1-202ENST00000394817 NUDT16Q96DE0 195 aaKnown RBP24.08■■□□□ 1.45
SIL1-202ENST00000394817 PTCH1Q13635 1447 aa24.08■■□□□ 1.45
SIL1-202ENST00000394817 ANP32AP39687 249 aaKnown RBP24.08■■□□□ 1.44
SIL1-202ENST00000394817 BACH2Q9BYV9 841 aa24.08■■□□□ 1.44
SIL1-202ENST00000394817 CDK12Q9NYV4 1490 aaPredicted RBP24.07■■□□□ 1.44
SIL1-202ENST00000394817 NRKQ7Z2Y5 1582 aa24.07■■□□□ 1.44
SIL1-202ENST00000394817 PNNQ9H307 717 aaKnown RBP24.07■■□□□ 1.44
SIL1-202ENST00000394817 CCDC61Q9Y6R9 512 aa24.07■■□□□ 1.44
SIL1-202ENST00000394817 PRR36Q9H6K5 1346 aa24.07■■□□□ 1.44
SIL1-202ENST00000394817 POLKQ9UBT6 870 aa24.06■■□□□ 1.44
SIL1-202ENST00000394817 CANXP27824 592 aaKnown RBP24.06■■□□□ 1.44
SIL1-202ENST00000394817 AATKQ6ZMQ8 1374 aa24.05■■□□□ 1.44
SIL1-202ENST00000394817 CT47B1P0C2W7 299 aaPredicted RBP24.05■■□□□ 1.44
SIL1-202ENST00000394817 ANKLE2Q86XL3 938 aa24.05■■□□□ 1.44
SIL1-202ENST00000394817 TRIM35Q9UPQ4 493 aa24.05■■□□□ 1.44
SIL1-202ENST00000394817 IL16Q14005 1332 aa24.04■■□□□ 1.44
SIL1-202ENST00000394817 ERICH6Q7L0X2 663 aa24.04■■□□□ 1.44
SIL1-202ENST00000394817 FCHSD2O94868 740 aa24.02■■□□□ 1.44
SIL1-202ENST00000394817 SKAP1Q86WV1 359 aa24.02■■□□□ 1.44
SIL1-202ENST00000394817 NME9Q86XW9 330 aa24.01■■□□□ 1.43
SIL1-202ENST00000394817 PANK1Q8TE04 598 aa24.01■■□□□ 1.43
SIL1-202ENST00000394817 NUTM2FA1L443 756 aa24■■□□□ 1.43
SIL1-202ENST00000394817 KCNA6P17658 529 aa24■■□□□ 1.43
SIL1-202ENST00000394817 CHD2O14647 1828 aaKnown RBP24■■□□□ 1.43
SIL1-202ENST00000394817 AAMPQ13685 434 aa24■■□□□ 1.43
SIL1-202ENST00000394817 FRAT1Q92837 279 aaPredicted RBP24■■□□□ 1.43
SIL1-202ENST00000394817 CLUAP1Q96AJ1 413 aa24■■□□□ 1.43
SIL1-202ENST00000394817 IPO9Q96P70 1041 aaKnown RBP24■■□□□ 1.43
SIL1-202ENST00000394817 ZNF692Q9BU19 519 aaPredicted RBP23.99■■□□□ 1.43
SIL1-202ENST00000394817 RSPH6AQ9H0K4 717 aa23.99■■□□□ 1.43
SIL1-202ENST00000394817 COG6Q9Y2V7 657 aa23.98■■□□□ 1.43
SIL1-202ENST00000394817 PIK3R4Q99570 1358 aa23.98■■□□□ 1.43
SIL1-202ENST00000394817 NALCNQ8IZF0 1738 aa23.98■■□□□ 1.43
SIL1-202ENST00000394817 NOP58Q9Y2X3 529 aaKnown RBP23.98■■□□□ 1.43
SIL1-202ENST00000394817 FBLN1P23142 703 aa23.97■■□□□ 1.43
SIL1-202ENST00000394817 RIPK4P57078 832 aa23.97■■□□□ 1.43
SIL1-202ENST00000394817 VIRMAQ69YN4 1812 aaKnown RBP23.97■■□□□ 1.43
SIL1-202ENST00000394817 TSR2Q969E8 191 aaKnown RBP23.96■■□□□ 1.43
SIL1-202ENST00000394817 COG3Q96JB2 828 aa23.96■■□□□ 1.43
SIL1-202ENST00000394817 RGPD8O14715 1765 aaPredicted RBP23.96■■□□□ 1.43
SIL1-202ENST00000394817 PPM1GO15355 546 aaPredicted RBP23.96■■□□□ 1.43
SIL1-202ENST00000394817 EMILIN1Q9Y6C2 1016 aa23.96■■□□□ 1.43
SIL1-202ENST00000394817 DLG5Q8TDM6 1919 aa23.95■■□□□ 1.42
SIL1-202ENST00000394817 PRKAR2BP31323 418 aa23.94■■□□□ 1.42
SIL1-202ENST00000394817 BCL2L13Q9BXK5 485 aa23.94■■□□□ 1.42
SIL1-202ENST00000394817 NPHP4O75161 1426 aaPredicted RBP23.94■■□□□ 1.42
SIL1-202ENST00000394817 RLBP1P12271 317 aa23.94■■□□□ 1.42
SIL1-202ENST00000394817 ZRANB1Q9UGI0 708 aa23.94■■□□□ 1.42
SIL1-202ENST00000394817 IL13P35225 146 aa23.93■■□□□ 1.42
SIL1-202ENST00000394817 EXOSC9Q06265 439 aaKnown RBP23.93■■□□□ 1.42
SIL1-202ENST00000394817 NEFMP07197 916 aa23.92■■□□□ 1.42
SIL1-202ENST00000394817 OVOS2A0A0J9YW53 1432 aa23.91■■□□□ 1.42
SIL1-202ENST00000394817 OVOS2Q6IE36 1432 aa23.91■■□□□ 1.42
SIL1-202ENST00000394817 IGHDP01880 384 aa23.91■■□□□ 1.42
SIL1-202ENST00000394817 PLEKHG3A1L390 1219 aa23.9■■□□□ 1.42
SIL1-202ENST00000394817 TNNQ9UQP3 1299 aa23.9■■□□□ 1.42
SIL1-202ENST00000394817 USP6P35125 1406 aa23.9■■□□□ 1.42
SIL1-202ENST00000394817 ACEP12821 1306 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms