RNA–Protein interactions for RNA: ENST00000394089.6

RARA-204, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RARA, Length 2,024 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-204ENST00000394089 SENP3-EIF4A1A0A087X0R7 540 aa30.56■■■□□ 2.48
RARA-204ENST00000394089 PLEKHG3A1L390 1219 aa30.56■■■□□ 2.48
RARA-204ENST00000394089 SHPRHQ149N8 1683 aa30.55■■■□□ 2.48
RARA-204ENST00000394089 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.52■■■□□ 2.48
RARA-204ENST00000394089 SALL2Q9Y467 1007 aaPredicted RBP30.48■■■□□ 2.47
RARA-204ENST00000394089 ANKARQ7Z5J8 1434 aa30.47■■■□□ 2.47
RARA-204ENST00000394089 NKTRP30414 1462 aaKnown RBP30.47■■■□□ 2.47
RARA-204ENST00000394089 ACEP12821 1306 aa30.46■■■□□ 2.47
RARA-204ENST00000394089 NRKQ7Z2Y5 1582 aa30.45■■■□□ 2.47
RARA-204ENST00000394089 COL3A1P02461 1466 aaPredicted RBP30.43■■■□□ 2.46
RARA-204ENST00000394089 NUTM2FA1L443 756 aa30.43■■■□□ 2.46
RARA-204ENST00000394089 NME9Q86XW9 330 aa30.43■■■□□ 2.46
RARA-204ENST00000394089 FMN2Q9NZ56 1722 aa30.43■■■□□ 2.46
RARA-204ENST00000394089 CCDC146Q8IYE0 955 aa30.42■■■□□ 2.46
RARA-204ENST00000394089 NGEFQ8N5V2 710 aa30.42■■■□□ 2.46
RARA-204ENST00000394089 USP6P35125 1406 aa30.42■■■□□ 2.46
RARA-204ENST00000394089 PNPLA6Q8IY17 1366 aa30.41■■■□□ 2.46
RARA-204ENST00000394089 NWD1Q149M9 1564 aa30.41■■■□□ 2.46
RARA-204ENST00000394089 TTC21BQ7Z4L5 1316 aa30.4■■■□□ 2.46
RARA-204ENST00000394089 ZNF521Q96K83 1311 aa30.4■■■□□ 2.46
RARA-204ENST00000394089 NALCNQ8IZF0 1738 aa30.39■■■□□ 2.46
RARA-204ENST00000394089 AATKQ6ZMQ8 1374 aa30.39■■■□□ 2.46
RARA-204ENST00000394089 SSH2Q76I76 1423 aa30.38■■■□□ 2.45
RARA-204ENST00000394089 COG3Q96JB2 828 aa30.38■■■□□ 2.45
RARA-204ENST00000394089 APAF1O14727 1248 aa30.37■■■□□ 2.45
RARA-204ENST00000394089 B4GALNT3Q6L9W6 998 aa30.37■■■□□ 2.45
RARA-204ENST00000394089 PAK3O75914 559 aaPredicted RBP30.36■■■□□ 2.45
RARA-204ENST00000394089 RUNDC1Q96C34 613 aa30.35■■■□□ 2.45
RARA-204ENST00000394089 ADGRL3Q9HAR2 1447 aa30.35■■■□□ 2.45
RARA-204ENST00000394089 RGPD8O14715 1765 aaPredicted RBP30.35■■■□□ 2.45
RARA-204ENST00000394089 CDCA7LQ96GN5 454 aa30.35■■■□□ 2.45
RARA-204ENST00000394089 POLKQ9UBT6 870 aa30.35■■■□□ 2.45
RARA-204ENST00000394089 ZRANB1Q9UGI0 708 aa30.34■■■□□ 2.45
RARA-204ENST00000394089 RNF123Q5XPI4 1314 aa30.34■■■□□ 2.45
RARA-204ENST00000394089 IPO9Q96P70 1041 aaKnown RBP30.32■■■□□ 2.44
RARA-204ENST00000394089 TTC21AQ8NDW8 1320 aa30.32■■■□□ 2.44
RARA-204ENST00000394089 PMFBP1Q8TBY8 1022 aa30.32■■■□□ 2.44
RARA-204ENST00000394089 IQSEC2Q5JU85 1478 aa30.3■■■□□ 2.44
RARA-204ENST00000394089 NGDNQ8NEJ9 315 aaKnown RBP30.3■■■□□ 2.44
RARA-204ENST00000394089 OVOS2A0A0J9YW53 1432 aa30.3■■■□□ 2.44
RARA-204ENST00000394089 OVOS2Q6IE36 1432 aa30.3■■■□□ 2.44
RARA-204ENST00000394089 DIAPH1O60610 1272 aaKnown RBP30.3■■■□□ 2.44
RARA-204ENST00000394089 U2AF1L5P0DN76 240 aaPredicted RBP30.3■■■□□ 2.44
RARA-204ENST00000394089 U2AF1Q01081 240 aaKnown RBP eCLIP30.3■■■□□ 2.44
RARA-204ENST00000394089 KDM4FA0A1W2PPD8 638 aa30.29■■■□□ 2.44
RARA-204ENST00000394089 MAP2P11137 1827 aaKnown RBP30.29■■■□□ 2.44
RARA-204ENST00000394089 GOLGA2Q08379 1002 aa30.29■■■□□ 2.44
RARA-204ENST00000394089 NCBP3Q53F19 620 aaKnown RBP30.28■■■□□ 2.44
RARA-204ENST00000394089 CDK12Q9NYV4 1490 aaPredicted RBP30.28■■■□□ 2.44
RARA-204ENST00000394089 FBLN1P23142 703 aa30.25■■■□□ 2.43
RARA-204ENST00000394089 ANP32AP39687 249 aaKnown RBP30.24■■■□□ 2.43
RARA-204ENST00000394089 NBR1Q14596 966 aa30.24■■■□□ 2.43
RARA-204ENST00000394089 USP31Q70CQ4 1352 aa30.24■■■□□ 2.43
RARA-204ENST00000394089 TCP11L2Q8N4U5 519 aa30.23■■■□□ 2.43
RARA-204ENST00000394089 EMILIN1Q9Y6C2 1016 aa30.23■■■□□ 2.43
RARA-204ENST00000394089 U2SURPO15042 1029 aaKnown RBP30.23■■■□□ 2.43
RARA-204ENST00000394089 RBM33Q96EV2 1170 aaKnown RBP30.23■■■□□ 2.43
RARA-204ENST00000394089 RCAN3Q9UKA8 241 aa30.22■■■□□ 2.43
RARA-204ENST00000394089 SLFN5Q08AF3 891 aa30.22■■■□□ 2.43
RARA-204ENST00000394089 PPM1GO15355 546 aaPredicted RBP30.21■■■□□ 2.43
RARA-204ENST00000394089 RTL5Q5HYW3 569 aaPredicted RBP30.21■■■□□ 2.43
RARA-204ENST00000394089 DUSP27Q5VZP5 1158 aa30.2■■■□□ 2.43
RARA-204ENST00000394089 TRMT2AQ8IZ69 625 aaKnown RBP30.2■■■□□ 2.43
RARA-204ENST00000394089 PHF23Q9BUL5 403 aaPredicted RBP30.2■■■□□ 2.43
RARA-204ENST00000394089 PLEKHF1Q96S99 279 aa30.2■■■□□ 2.42
RARA-204ENST00000394089 PHF8Q9UPP1 1060 aa30.2■■■□□ 2.42
RARA-204ENST00000394089 CCDC27Q2M243 656 aa30.19■■■□□ 2.42
RARA-204ENST00000394089 PROSER2Q86WR7 435 aaPredicted RBP30.19■■■□□ 2.42
RARA-204ENST00000394089 PNNQ9H307 717 aaKnown RBP30.19■■■□□ 2.42
RARA-204ENST00000394089 ANO8Q9HCE9 1232 aaPredicted RBP30.19■■■□□ 2.42
RARA-204ENST00000394089 WWC1Q8IX03 1113 aa30.18■■■□□ 2.42
RARA-204ENST00000394089 C14orf37Q86TY3 774 aa30.18■■■□□ 2.42
RARA-204ENST00000394089 RRS1Q15050 365 aaKnown RBP30.17■■■□□ 2.42
RARA-204ENST00000394089 LMTK3Q96Q04 1460 aa30.16■■■□□ 2.42
RARA-204ENST00000394089 PIK3C2AO00443 1686 aa30.16■■■□□ 2.42
RARA-204ENST00000394089 E9PSI1 815 aa30.16■■■□□ 2.42
RARA-204ENST00000394089 HSPA2P54652 639 aa30.16■■■□□ 2.42
RARA-204ENST00000394089 IL13P35225 146 aa30.15■■■□□ 2.42
RARA-204ENST00000394089 FCHSD2O94868 740 aa30.15■■■□□ 2.42
RARA-204ENST00000394089 ZBTB47Q9UFB7 747 aaPredicted RBP30.14■■■□□ 2.42
RARA-204ENST00000394089 USP54Q70EL1 1684 aa30.14■■■□□ 2.41
RARA-204ENST00000394089 RRP7AQ9Y3A4 280 aaKnown RBP30.12■■■□□ 2.41
RARA-204ENST00000394089 LRRC7Q96NW7 1537 aa30.12■■■□□ 2.41
RARA-204ENST00000394089 NCOA3Q9Y6Q9 1424 aa30.12■■■□□ 2.41
RARA-204ENST00000394089 WDR63Q8IWG1 891 aa30.12■■■□□ 2.41
RARA-204ENST00000394089 MAPK8IP3Q9UPT6 1336 aa30.11■■■□□ 2.41
RARA-204ENST00000394089 RRP1P56182 461 aaKnown RBP30.11■■■□□ 2.41
RARA-204ENST00000394089 SPINK5Q9NQ38 1064 aaPredicted RBP30.11■■■□□ 2.41
RARA-204ENST00000394089 C19orf44Q9H6X5 657 aa30.1■■■□□ 2.41
RARA-204ENST00000394089 USP35Q9P2H5 1018 aa30.1■■■□□ 2.41
RARA-204ENST00000394089 NEUROD2Q15784 382 aa30.1■■■□□ 2.41
RARA-204ENST00000394089 ESCO1Q5FWF5 840 aa30.09■■■□□ 2.41
RARA-204ENST00000394089 RSPH6AQ9H0K4 717 aa30.09■■■□□ 2.41
RARA-204ENST00000394089 DMRT2Q9Y5R5 561 aa30.09■■■□□ 2.41
RARA-204ENST00000394089 STRCP1A6NGW2 1772 aa30.08■■■□□ 2.41
RARA-204ENST00000394089 TMPOP42166 694 aaKnown RBP30.07■■■□□ 2.4
RARA-204ENST00000394089 PEAK1Q9H792 1746 aa30.05■■■□□ 2.4
RARA-204ENST00000394089 NLRP6P59044 892 aa30.05■■■□□ 2.4
RARA-204ENST00000394089 MARF1Q9Y4F3 1742 aaKnown RBP30.05■■■□□ 2.4
RARA-204ENST00000394089 TMEM94Q12767 1356 aa30.04■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms