RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 NOS1P29475 1434 aa28.46■■■□□ 2.15
RARA-202ENST00000394081 BMP2KLQ5H9B9 411 aa28.45■■■□□ 2.15
RARA-202ENST00000394081 ITPRIPQ8IWB1 547 aa28.45■■■□□ 2.15
RARA-202ENST00000394081 CFAP74Q9C0B2 1584 aa28.45■■■□□ 2.14
RARA-202ENST00000394081 REREQ9P2R6 1566 aa28.44■■■□□ 2.14
RARA-202ENST00000394081 FANCAO15360 1455 aa28.44■■■□□ 2.14
RARA-202ENST00000394081 TERF1P54274 439 aa28.44■■■□□ 2.14
RARA-202ENST00000394081 EFCAB6Q5THR3 1501 aa28.43■■■□□ 2.14
RARA-202ENST00000394081 MROH2AA6NES4 1674 aa28.43■■■□□ 2.14
RARA-202ENST00000394081 IPO8O15397 1037 aaKnown RBP28.43■■■□□ 2.14
RARA-202ENST00000394081 PDCL3Q9H2J4 239 aa28.43■■■□□ 2.14
RARA-202ENST00000394081 ATP7AQ04656 1500 aa28.42■■■□□ 2.14
RARA-202ENST00000394081 SSH1Q8WYL5 1049 aa28.42■■■□□ 2.14
RARA-202ENST00000394081 SLC12A5Q9H2X9 1139 aa28.42■■■□□ 2.14
RARA-202ENST00000394081 MROH1Q8NDA8 1641 aa28.42■■■□□ 2.14
RARA-202ENST00000394081 CHD1O14646 1710 aa28.42■■■□□ 2.14
RARA-202ENST00000394081 GOLGA6L22H0YM25 854 aa28.41■■■□□ 2.14
RARA-202ENST00000394081 TNNT2P45379 298 aaPredicted RBP28.41■■■□□ 2.14
RARA-202ENST00000394081 ADGRB3O60242 1522 aa28.41■■■□□ 2.14
RARA-202ENST00000394081 EXOSC9Q06265 439 aaKnown RBP28.41■■■□□ 2.14
RARA-202ENST00000394081 ZCCHC11Q5TAX3 1644 aaKnown RBP28.41■■■□□ 2.14
RARA-202ENST00000394081 U2AF1L5P0DN76 240 aaPredicted RBP28.4■■■□□ 2.14
RARA-202ENST00000394081 U2AF1Q01081 240 aaKnown RBP eCLIP28.4■■■□□ 2.14
RARA-202ENST00000394081 UGGT1Q9NYU2 1555 aa28.4■■■□□ 2.14
RARA-202ENST00000394081 UHRF1BP1LA0JNW5 1464 aa28.39■■■□□ 2.14
RARA-202ENST00000394081 RIMBP3CA6NJZ7 1639 aa28.39■■■□□ 2.14
RARA-202ENST00000394081 RIMBP3BA6NNM3 1639 aa28.39■■■□□ 2.14
RARA-202ENST00000394081 RIMBP3Q9UFD9 1639 aa28.39■■■□□ 2.14
RARA-202ENST00000394081 ZSCAN30Q86W11 494 aa28.39■■■□□ 2.14
RARA-202ENST00000394081 CHD1LQ86WJ1 897 aa28.39■■■□□ 2.13
RARA-202ENST00000394081 ANP32BQ92688 251 aaKnown RBP28.39■■■□□ 2.13
RARA-202ENST00000394081 KIF2CQ99661 725 aa28.39■■■□□ 2.13
RARA-202ENST00000394081 ANKRD36BQ8N2N9 1353 aa28.38■■■□□ 2.13
RARA-202ENST00000394081 ADGRB1O14514 1584 aa28.38■■■□□ 2.13
RARA-202ENST00000394081 K7ELQ4 463 aaPredicted RBP28.38■■■□□ 2.13
RARA-202ENST00000394081 KLHL40Q2TBA0 621 aa28.38■■■□□ 2.13
RARA-202ENST00000394081 HS1BP3Q53T59 392 aa28.37■■■□□ 2.13
RARA-202ENST00000394081 CHMP4BQ9H444 224 aaKnown RBP28.37■■■□□ 2.13
RARA-202ENST00000394081 LMTK2Q8IWU2 1503 aa28.37■■■□□ 2.13
RARA-202ENST00000394081 ALDH1L2Q3SY69 923 aa28.36■■■□□ 2.13
RARA-202ENST00000394081 TMEM57Q8N5G2 664 aa28.36■■■□□ 2.13
RARA-202ENST00000394081 TSR2Q969E8 191 aaKnown RBP28.36■■■□□ 2.13
RARA-202ENST00000394081 PLEKHF1Q96S99 279 aa28.36■■■□□ 2.13
RARA-202ENST00000394081 NOB1Q9ULX3 412 aaKnown RBP28.36■■■□□ 2.13
RARA-202ENST00000394081 CD109Q6YHK3 1445 aa28.36■■■□□ 2.13
RARA-202ENST00000394081 NASPP49321 788 aaPredicted RBP28.35■■■□□ 2.13
RARA-202ENST00000394081 MED14O60244 1454 aa28.35■■■□□ 2.13
RARA-202ENST00000394081 OFD1O75665 1012 aa28.35■■■□□ 2.13
RARA-202ENST00000394081 BRPF1P55201 1214 aaPredicted RBP28.35■■■□□ 2.13
RARA-202ENST00000394081 C14orf93Q9H972 538 aaKnown RBP28.35■■■□□ 2.13
RARA-202ENST00000394081 TMPOP42166 694 aaKnown RBP28.34■■■□□ 2.13
RARA-202ENST00000394081 AFAP1Q8N556 730 aa28.34■■■□□ 2.13
RARA-202ENST00000394081 ZNF428Q96B54 188 aa28.34■■■□□ 2.13
RARA-202ENST00000394081 GCC1Q96CN9 775 aa28.34■■■□□ 2.13
RARA-202ENST00000394081 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.33■■■□□ 2.13
RARA-202ENST00000394081 TRIM35Q9UPQ4 493 aa28.33■■■□□ 2.13
RARA-202ENST00000394081 PPLO60437 1756 aa28.33■■■□□ 2.13
RARA-202ENST00000394081 KIAA1211Q6ZU35 1233 aa28.31■■■□□ 2.12
RARA-202ENST00000394081 CFAP44Q96MT7 982 aa28.31■■■□□ 2.12
RARA-202ENST00000394081 LNPKQ9C0E8 428 aa28.3■■■□□ 2.12
RARA-202ENST00000394081 COL3A1P02461 1466 aaPredicted RBP28.3■■■□□ 2.12
RARA-202ENST00000394081 KIF3BO15066 747 aa28.3■■■□□ 2.12
RARA-202ENST00000394081 ZNF445P59923 1031 aa28.3■■■□□ 2.12
RARA-202ENST00000394081 PPRC1Q5VV67 1664 aaKnown RBP28.29■■■□□ 2.12
RARA-202ENST00000394081 TRAK1Q9UPV9 953 aa28.28■■■□□ 2.12
RARA-202ENST00000394081 EVC2Q86UK5 1308 aa28.27■■■□□ 2.12
RARA-202ENST00000394081 MSNP26038 577 aaKnown RBP28.27■■■□□ 2.12
RARA-202ENST00000394081 MAP7D2Q96T17 732 aa28.26■■■□□ 2.11
RARA-202ENST00000394081 ABCA9Q8IUA7 1624 aa28.26■■■□□ 2.11
RARA-202ENST00000394081 RPGRIP1LQ68CZ1 1315 aa28.25■■■□□ 2.11
RARA-202ENST00000394081 BAG4O95429 457 aaKnown RBP28.25■■■□□ 2.11
RARA-202ENST00000394081 PIK3R4Q99570 1358 aa28.25■■■□□ 2.11
RARA-202ENST00000394081 DDX49Q9Y6V7 483 aaKnown RBP28.25■■■□□ 2.11
RARA-202ENST00000394081 PPIP5K1Q6PFW1 1433 aa28.24■■■□□ 2.11
RARA-202ENST00000394081 SSFA2P28290 1259 aa28.23■■■□□ 2.11
RARA-202ENST00000394081 TBC1D9Q6ZT07 1266 aa28.23■■■□□ 2.11
RARA-202ENST00000394081 TULP4Q9NRJ4 1543 aa28.23■■■□□ 2.11
RARA-202ENST00000394081 CD2BP2O95400 341 aaKnown RBP28.23■■■□□ 2.11
RARA-202ENST00000394081 NUCB2P80303 420 aa28.23■■■□□ 2.11
RARA-202ENST00000394081 ARHGAP45Q92619 1136 aa28.22■■■□□ 2.11
RARA-202ENST00000394081 ERCC6L2Q5T890 1561 aa28.21■■■□□ 2.11
RARA-202ENST00000394081 ANKRD26Q9UPS8 1709 aa28.21■■■□□ 2.11
RARA-202ENST00000394081 GAS2L2Q8NHY3 880 aa28.21■■■□□ 2.11
RARA-202ENST00000394081 RABEP1Q15276 862 aa28.2■■■□□ 2.1
RARA-202ENST00000394081 ARHGEF28Q8N1W1 1705 aaKnown RBP28.19■■■□□ 2.1
RARA-202ENST00000394081 ZNF500O60304 480 aaPredicted RBP28.19■■■□□ 2.1
RARA-202ENST00000394081 CDC45O75419 566 aa28.19■■■□□ 2.1
RARA-202ENST00000394081 GLI2P10070 1586 aa28.19■■■□□ 2.1
RARA-202ENST00000394081 PTCH1Q13635 1447 aa28.19■■■□□ 2.1
RARA-202ENST00000394081 ANKRD45Q5TZF3 282 aa28.18■■■□□ 2.1
RARA-202ENST00000394081 PDLIM2Q96JY6 352 aa28.18■■■□□ 2.1
RARA-202ENST00000394081 ZBTB7BO15156 539 aaPredicted RBP28.18■■■□□ 2.1
RARA-202ENST00000394081 NOL7Q9UMY1 257 aaKnown RBP28.18■■■□□ 2.1
RARA-202ENST00000394081 CALD1Q05682 793 aaKnown RBP28.17■■■□□ 2.1
RARA-202ENST00000394081 CYB5RLQ6IPT4 315 aa28.17■■■□□ 2.1
RARA-202ENST00000394081 CYP2E1P05181 493 aaPredicted RBP28.16■■■□□ 2.1
RARA-202ENST00000394081 RIPK4P57078 832 aa28.16■■■□□ 2.1
RARA-202ENST00000394081 CDC42BPGQ6DT37 1551 aa28.16■■■□□ 2.1
RARA-202ENST00000394081 U2SURPO15042 1029 aaKnown RBP28.16■■■□□ 2.1
RARA-202ENST00000394081 MCM5P33992 734 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms