RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 IPO9Q96P70 1041 aaKnown RBP19.01■□□□□ 0.63
CDH16-202ENST00000394055 NCKAP5LQ9HCH0 1330 aa19.01■□□□□ 0.63
CDH16-202ENST00000394055 NRXN3Q9Y4C0 1643 aa19.01■□□□□ 0.63
CDH16-202ENST00000394055 TNNQ9UQP3 1299 aa19.01■□□□□ 0.63
CDH16-202ENST00000394055 PLEKHF1Q96S99 279 aa19■□□□□ 0.63
CDH16-202ENST00000394055 ANKRD26Q9UPS8 1709 aa19■□□□□ 0.63
CDH16-202ENST00000394055 TSR2Q969E8 191 aaKnown RBP19■□□□□ 0.63
CDH16-202ENST00000394055 MAPK8IP3Q9UPT6 1336 aa19■□□□□ 0.63
CDH16-202ENST00000394055 TNRQ92752 1358 aa19■□□□□ 0.63
CDH16-202ENST00000394055 DIAPH1O60610 1272 aaKnown RBP18.99■□□□□ 0.63
CDH16-202ENST00000394055 MED14O60244 1454 aa18.99■□□□□ 0.63
CDH16-202ENST00000394055 WASLO00401 505 aaPredicted RBP18.99■□□□□ 0.63
CDH16-202ENST00000394055 TMPOP42166 694 aaKnown RBP18.99■□□□□ 0.63
CDH16-202ENST00000394055 PLPPR3Q6T4P5 718 aa18.99■□□□□ 0.63
CDH16-202ENST00000394055 RGS3P49796 1198 aa18.98■□□□□ 0.63
CDH16-202ENST00000394055 PDE3AQ14432 1141 aa18.98■□□□□ 0.63
CDH16-202ENST00000394055 MYH16Q9H6N6 1097 aa18.98■□□□□ 0.63
CDH16-202ENST00000394055 ADGRB2O60241 1585 aa18.98■□□□□ 0.63
CDH16-202ENST00000394055 KIF20BQ96Q89 1820 aa18.97■□□□□ 0.63
CDH16-202ENST00000394055 CLUAP1Q96AJ1 413 aa18.96■□□□□ 0.63
CDH16-202ENST00000394055 ZRANB1Q9UGI0 708 aa18.96■□□□□ 0.63
CDH16-202ENST00000394055 PPIP5K1Q6PFW1 1433 aa18.96■□□□□ 0.63
CDH16-202ENST00000394055 IGHDP01880 384 aa18.96■□□□□ 0.63
CDH16-202ENST00000394055 NME9Q86XW9 330 aa18.96■□□□□ 0.63
CDH16-202ENST00000394055 TRIM35Q9UPQ4 493 aa18.96■□□□□ 0.63
CDH16-202ENST00000394055 ATP7BP35670 1465 aa18.95■□□□□ 0.62
CDH16-202ENST00000394055 RLBP1P12271 317 aa18.95■□□□□ 0.62
CDH16-202ENST00000394055 CEBPAP49715 358 aaPredicted RBP18.95■□□□□ 0.62
CDH16-202ENST00000394055 POLKQ9UBT6 870 aa18.95■□□□□ 0.62
CDH16-202ENST00000394055 ZBTB47Q9UFB7 747 aaPredicted RBP18.95■□□□□ 0.62
CDH16-202ENST00000394055 NUDT16Q96DE0 195 aaKnown RBP18.94■□□□□ 0.62
CDH16-202ENST00000394055 RIPK4P57078 832 aa18.94■□□□□ 0.62
CDH16-202ENST00000394055 HDGFP51858 240 aaKnown RBP18.93■□□□□ 0.62
CDH16-202ENST00000394055 EMILIN1Q9Y6C2 1016 aa18.93■□□□□ 0.62
CDH16-202ENST00000394055 PNPLA6Q8IY17 1366 aa18.92■□□□□ 0.62
CDH16-202ENST00000394055 TMEM2Q9UHN6 1383 aa18.92■□□□□ 0.62
CDH16-202ENST00000394055 EXOSC9Q06265 439 aaKnown RBP18.92■□□□□ 0.62
CDH16-202ENST00000394055 NUTM2FA1L443 756 aa18.92■□□□□ 0.62
CDH16-202ENST00000394055 HMOX1P09601 288 aa18.91■□□□□ 0.62
CDH16-202ENST00000394055 PRKAR2BP31323 418 aa18.91■□□□□ 0.62
CDH16-202ENST00000394055 NCBP3Q53F19 620 aaKnown RBP18.9■□□□□ 0.62
CDH16-202ENST00000394055 CPSF1Q10570 1443 aaKnown RBP18.9■□□□□ 0.62
CDH16-202ENST00000394055 LTKP29376 864 aa18.89■□□□□ 0.61
CDH16-202ENST00000394055 CCDC61Q9Y6R9 512 aa18.89■□□□□ 0.61
CDH16-202ENST00000394055 ROBO2Q9HCK4 1378 aa18.89■□□□□ 0.61
CDH16-202ENST00000394055 EDC4Q6P2E9 1401 aaKnown RBP18.89■□□□□ 0.61
CDH16-202ENST00000394055 UBR1Q8IWV7 1749 aa18.89■□□□□ 0.61
CDH16-202ENST00000394055 NBR1Q14596 966 aa18.88■□□□□ 0.61
CDH16-202ENST00000394055 SLC26A8Q96RN1 970 aa18.88■□□□□ 0.61
CDH16-202ENST00000394055 SMC4Q9NTJ3 1288 aa18.88■□□□□ 0.61
CDH16-202ENST00000394055 PRR36Q9H6K5 1346 aa18.88■□□□□ 0.61
CDH16-202ENST00000394055 LRRC7Q96NW7 1537 aa18.88■□□□□ 0.61
CDH16-202ENST00000394055 RRS1Q15050 365 aaKnown RBP18.87■□□□□ 0.61
CDH16-202ENST00000394055 RSPH6AQ9H0K4 717 aa18.87■□□□□ 0.61
CDH16-202ENST00000394055 FAM135BQ49AJ0 1406 aa18.87■□□□□ 0.61
CDH16-202ENST00000394055 MAP2P11137 1827 aaKnown RBP18.87■□□□□ 0.61
CDH16-202ENST00000394055 CPS1P31327 1500 aa18.87■□□□□ 0.61
CDH16-202ENST00000394055 FCHSD2O94868 740 aa18.87■□□□□ 0.61
CDH16-202ENST00000394055 TECPR2O15040 1411 aa18.86■□□□□ 0.61
CDH16-202ENST00000394055 PCDHB15Q9Y5E8 787 aa18.86■□□□□ 0.61
CDH16-202ENST00000394055 ADAMTS13Q76LX8 1427 aa18.86■□□□□ 0.61
CDH16-202ENST00000394055 FAM161AQ3B820 660 aa18.86■□□□□ 0.61
CDH16-202ENST00000394055 C8orf34Q49A92 452 aa18.86■□□□□ 0.61
CDH16-202ENST00000394055 COG3Q96JB2 828 aa18.86■□□□□ 0.61
CDH16-202ENST00000394055 PHACTR3Q96KR7 559 aa18.86■□□□□ 0.61
CDH16-202ENST00000394055 PNNQ9H307 717 aaKnown RBP18.86■□□□□ 0.61
CDH16-202ENST00000394055 LAS1LQ9Y4W2 734 aaKnown RBP18.86■□□□□ 0.61
CDH16-202ENST00000394055 ZKSCAN2Q63HK3 967 aa18.85■□□□□ 0.61
CDH16-202ENST00000394055 FTSJ3Q8IY81 847 aaKnown RBP18.85■□□□□ 0.61
CDH16-202ENST00000394055 SSH1Q8WYL5 1049 aa18.85■□□□□ 0.61
CDH16-202ENST00000394055 NEFMP07197 916 aa18.84■□□□□ 0.61
CDH16-202ENST00000394055 THUMPD2Q9BTF0 503 aaKnown RBP18.84■□□□□ 0.61
CDH16-202ENST00000394055 CDC42BPGQ6DT37 1551 aa18.84■□□□□ 0.61
CDH16-202ENST00000394055 KNDC1Q76NI1 1749 aa18.84■□□□□ 0.61
CDH16-202ENST00000394055 SIRT1Q96EB6 747 aa18.83■□□□□ 0.6
CDH16-202ENST00000394055 DZIP1LQ8IYY4 767 aaKnown RBP18.82■□□□□ 0.6
CDH16-202ENST00000394055 IL16Q14005 1332 aa18.82■□□□□ 0.6
CDH16-202ENST00000394055 IL13P35225 146 aa18.82■□□□□ 0.6
CDH16-202ENST00000394055 MVPQ14764 893 aaKnown RBP18.81■□□□□ 0.6
CDH16-202ENST00000394055 CT47B1P0C2W7 299 aaPredicted RBP18.81■□□□□ 0.6
CDH16-202ENST00000394055 TRIM27P14373 513 aa18.8■□□□□ 0.6
CDH16-202ENST00000394055 PLEKHG1Q9ULL1 1385 aa18.8■□□□□ 0.6
CDH16-202ENST00000394055 NFE2L2Q16236 605 aa18.79■□□□□ 0.6
CDH16-202ENST00000394055 PMFBP1Q8TBY8 1022 aa18.79■□□□□ 0.6
CDH16-202ENST00000394055 NOB1Q9ULX3 412 aaKnown RBP18.79■□□□□ 0.6
CDH16-202ENST00000394055 MON2Q7Z3U7 1717 aa18.79■□□□□ 0.6
CDH16-202ENST00000394055 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.78■□□□□ 0.6
CDH16-202ENST00000394055 EID1Q9Y6B2 187 aa18.78■□□□□ 0.6
CDH16-202ENST00000394055 CDK12Q9NYV4 1490 aaPredicted RBP18.78■□□□□ 0.6
CDH16-202ENST00000394055 SOX12O15370 315 aa18.78■□□□□ 0.6
CDH16-202ENST00000394055 ACEP12821 1306 aa18.78■□□□□ 0.6
CDH16-202ENST00000394055 ITSN1Q15811 1721 aa18.78■□□□□ 0.6
CDH16-202ENST00000394055 ITPRIPQ8IWB1 547 aa18.78■□□□□ 0.6
CDH16-202ENST00000394055 ZNF692Q9BU19 519 aaPredicted RBP18.78■□□□□ 0.6
CDH16-202ENST00000394055 PTPRUQ92729 1446 aa18.77■□□□□ 0.6
CDH16-202ENST00000394055 AATKQ6ZMQ8 1374 aa18.77■□□□□ 0.6
CDH16-202ENST00000394055 ATF7IPQ6VMQ6 1270 aa18.76■□□□□ 0.59
CDH16-202ENST00000394055 AKAP12Q02952 1782 aa18.76■□□□□ 0.59
CDH16-202ENST00000394055 C3P01024 1663 aa18.75■□□□□ 0.59
CDH16-202ENST00000394055 TTC21BQ7Z4L5 1316 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms