RNA–Protein interactions for RNA: ENST00000393400.6

TPRA1-203, Transcript of transmembrane protein adipocyte associated 1, humanhuman

TSL 1 (best)

Gene TPRA1, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRA1-203ENST00000393400 WWC1Q8IX03 1113 aa36.14■■■■□ 3.38
TPRA1-203ENST00000393400 ZNF692Q9BU19 519 aaPredicted RBP36.13■■■■□ 3.37
TPRA1-203ENST00000393400 ADAMTSL3P82987 1691 aa36.12■■■■□ 3.37
TPRA1-203ENST00000393400 TCP11L2Q8N4U5 519 aa36.12■■■■□ 3.37
TPRA1-203ENST00000393400 SLC26A8Q96RN1 970 aa36.11■■■■□ 3.37
TPRA1-203ENST00000393400 PRR36Q9H6K5 1346 aa36.11■■■■□ 3.37
TPRA1-203ENST00000393400 XRN1Q8IZH2 1706 aaKnown RBP36.09■■■■□ 3.37
TPRA1-203ENST00000393400 ZNF142P52746 1687 aaPredicted RBP36.09■■■■□ 3.37
TPRA1-203ENST00000393400 U2AF1L5P0DN76 240 aaPredicted RBP36.09■■■■□ 3.37
TPRA1-203ENST00000393400 U2AF1Q01081 240 aaKnown RBP eCLIP36.09■■■■□ 3.37
TPRA1-203ENST00000393400 CCDC136Q96JN2 1154 aa36.09■■■■□ 3.37
TPRA1-203ENST00000393400 PIK3R4Q99570 1358 aa36.09■■■■□ 3.37
TPRA1-203ENST00000393400 WDR63Q8IWG1 891 aa36.08■■■■□ 3.37
TPRA1-203ENST00000393400 SPINK5Q9NQ38 1064 aaPredicted RBP36.08■■■■□ 3.37
TPRA1-203ENST00000393400 AATKQ6ZMQ8 1374 aa36.07■■■■□ 3.36
TPRA1-203ENST00000393400 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.07■■■■□ 3.36
TPRA1-203ENST00000393400 AMOTL2Q9Y2J4 779 aa36.07■■■■□ 3.36
TPRA1-203ENST00000393400 PLEKHG3A1L390 1219 aa36.04■■■■□ 3.36
TPRA1-203ENST00000393400 PLPPR3Q6T4P5 718 aa36.04■■■■□ 3.36
TPRA1-203ENST00000393400 EXOC6Q8TAG9 804 aa36.04■■■■□ 3.36
TPRA1-203ENST00000393400 DIAPH1O60610 1272 aaKnown RBP36.03■■■■□ 3.36
TPRA1-203ENST00000393400 NRKQ7Z2Y5 1582 aa36.03■■■■□ 3.36
TPRA1-203ENST00000393400 PLEKHF1Q96S99 279 aa36.01■■■■□ 3.36
TPRA1-203ENST00000393400 GOLGA6L2Q8N9W4 650 aaPredicted RBP36.01■■■■□ 3.35
TPRA1-203ENST00000393400 POLKQ9UBT6 870 aa36.01■■■■□ 3.35
TPRA1-203ENST00000393400 DMRT2Q9Y5R5 561 aa36.01■■■■□ 3.35
TPRA1-203ENST00000393400 PNNQ9H307 717 aaKnown RBP36■■■■□ 3.35
TPRA1-203ENST00000393400 MAP2P11137 1827 aaKnown RBP35.99■■■■□ 3.35
TPRA1-203ENST00000393400 CDK12Q9NYV4 1490 aaPredicted RBP35.98■■■■□ 3.35
TPRA1-203ENST00000393400 NCKAP5LQ9HCH0 1330 aa35.98■■■■□ 3.35
TPRA1-203ENST00000393400 NME9Q86XW9 330 aa35.97■■■■□ 3.35
TPRA1-203ENST00000393400 U2SURPO15042 1029 aaKnown RBP35.95■■■■□ 3.35
TPRA1-203ENST00000393400 PLIN1O60240 522 aa35.95■■■■□ 3.35
TPRA1-203ENST00000393400 COG3Q96JB2 828 aa35.94■■■■□ 3.34
TPRA1-203ENST00000393400 RRP7AQ9Y3A4 280 aaKnown RBP35.94■■■■□ 3.34
TPRA1-203ENST00000393400 SETD1BQ9UPS6 1966 aaKnown RBP35.94■■■■□ 3.34
TPRA1-203ENST00000393400 USP6P35125 1406 aa35.92■■■■□ 3.34
TPRA1-203ENST00000393400 ACEP12821 1306 aa35.91■■■■□ 3.34
TPRA1-203ENST00000393400 FCHSD2O94868 740 aa35.9■■■■□ 3.34
TPRA1-203ENST00000393400 NEUROD2Q15784 382 aa35.9■■■■□ 3.34
TPRA1-203ENST00000393400 TTC21BQ7Z4L5 1316 aa35.89■■■■□ 3.34
TPRA1-203ENST00000393400 MAPK8IP3Q9UPT6 1336 aa35.89■■■■□ 3.34
TPRA1-203ENST00000393400 SSH2Q76I76 1423 aa35.89■■■■□ 3.34
TPRA1-203ENST00000393400 ANKLE2Q86XL3 938 aa35.88■■■■□ 3.33
TPRA1-203ENST00000393400 CRBNQ96SW2 442 aa35.88■■■■□ 3.33
TPRA1-203ENST00000393400 ANKARQ7Z5J8 1434 aa35.88■■■■□ 3.33
TPRA1-203ENST00000393400 TMPOP42166 694 aaKnown RBP35.87■■■■□ 3.33
TPRA1-203ENST00000393400 OVOS2A0A0J9YW53 1432 aa35.86■■■■□ 3.33
TPRA1-203ENST00000393400 OVOS2Q6IE36 1432 aa35.86■■■■□ 3.33
TPRA1-203ENST00000393400 MYH16Q9H6N6 1097 aa35.85■■■■□ 3.33
TPRA1-203ENST00000393400 NALCNQ8IZF0 1738 aa35.84■■■■□ 3.33
TPRA1-203ENST00000393400 LRRC7Q96NW7 1537 aa35.84■■■■□ 3.33
TPRA1-203ENST00000393400 RBM19Q9Y4C8 960 aaKnown RBP35.84■■■■□ 3.33
TPRA1-203ENST00000393400 CHD2O14647 1828 aaKnown RBP35.84■■■■□ 3.33
TPRA1-203ENST00000393400 ZRANB1Q9UGI0 708 aa35.83■■■■□ 3.33
TPRA1-203ENST00000393400 IL16Q14005 1332 aa35.83■■■■□ 3.33
TPRA1-203ENST00000393400 EMILIN1Q9Y6C2 1016 aa35.82■■■■□ 3.32
TPRA1-203ENST00000393400 C20orf194Q5TEA3 1177 aa35.81■■■■□ 3.32
TPRA1-203ENST00000393400 TTC21AQ8NDW8 1320 aa35.81■■■■□ 3.32
TPRA1-203ENST00000393400 IL13P35225 146 aa35.8■■■■□ 3.32
TPRA1-203ENST00000393400 RSPH6AQ9H0K4 717 aa35.8■■■■□ 3.32
TPRA1-203ENST00000393400 KCNA6P17658 529 aa35.8■■■■□ 3.32
TPRA1-203ENST00000393400 FMN2Q9NZ56 1722 aa35.79■■■■□ 3.32
TPRA1-203ENST00000393400 USP31Q70CQ4 1352 aa35.79■■■■□ 3.32
TPRA1-203ENST00000393400 FBLN1P23142 703 aa35.78■■■■□ 3.32
TPRA1-203ENST00000393400 TRIM35Q9UPQ4 493 aa35.78■■■■□ 3.32
TPRA1-203ENST00000393400 CT47B1P0C2W7 299 aaPredicted RBP35.78■■■■□ 3.32
TPRA1-203ENST00000393400 PPM1GO15355 546 aaPredicted RBP35.77■■■■□ 3.32
TPRA1-203ENST00000393400 BCAR3O75815 825 aa35.75■■■■□ 3.31
TPRA1-203ENST00000393400 PDE3AQ14432 1141 aa35.73■■■■□ 3.31
TPRA1-203ENST00000393400 RGPD8O14715 1765 aaPredicted RBP35.73■■■■□ 3.31
TPRA1-203ENST00000393400 NUTM2FA1L443 756 aa35.72■■■■□ 3.31
TPRA1-203ENST00000393400 NEFMP07197 916 aa35.72■■■■□ 3.31
TPRA1-203ENST00000393400 RARSP54136 660 aaKnown RBP35.71■■■■□ 3.31
TPRA1-203ENST00000393400 PRKAR2BP31323 418 aa35.71■■■■□ 3.31
TPRA1-203ENST00000393400 RIPK4P57078 832 aa35.71■■■■□ 3.31
TPRA1-203ENST00000393400 RRS1Q15050 365 aaKnown RBP35.69■■■■□ 3.3
TPRA1-203ENST00000393400 FANCIQ9NVI1 1328 aa35.66■■■■□ 3.3
TPRA1-203ENST00000393400 NPHP4O75161 1426 aaPredicted RBP35.66■■■■□ 3.3
TPRA1-203ENST00000393400 NGDNQ8NEJ9 315 aaKnown RBP35.65■■■■□ 3.3
TPRA1-203ENST00000393400 USP54Q70EL1 1684 aa35.65■■■■□ 3.3
TPRA1-203ENST00000393400 NFE2L2Q16236 605 aa35.64■■■■□ 3.3
TPRA1-203ENST00000393400 PMFBP1Q8TBY8 1022 aa35.63■■■■□ 3.29
TPRA1-203ENST00000393400 PIK3C2AO00443 1686 aa35.6■■■■□ 3.29
TPRA1-203ENST00000393400 PEAK1Q9H792 1746 aa35.6■■■■□ 3.29
TPRA1-203ENST00000393400 KDM2BQ8NHM5 1336 aa35.6■■■■□ 3.29
TPRA1-203ENST00000393400 HMOX1P09601 288 aa35.59■■■■□ 3.29
TPRA1-203ENST00000393400 ADGRL3Q9HAR2 1447 aa35.59■■■■□ 3.29
TPRA1-203ENST00000393400 CALD1Q05682 793 aaKnown RBP35.58■■■■□ 3.29
TPRA1-203ENST00000393400 RGPD1P0DJD0 1748 aa35.57■■■■□ 3.28
TPRA1-203ENST00000393400 AAMPQ13685 434 aa35.57■■■■□ 3.28
TPRA1-203ENST00000393400 PHACTR3Q96KR7 559 aa35.57■■■■□ 3.28
TPRA1-203ENST00000393400 NWD1Q149M9 1564 aa35.56■■■■□ 3.28
TPRA1-203ENST00000393400 TCERG1O14776 1098 aaKnown RBP35.56■■■■□ 3.28
TPRA1-203ENST00000393400 CENPQQ7L2Z9 268 aaPredicted RBP35.56■■■■□ 3.28
TPRA1-203ENST00000393400 EIF4A2Q14240 407 aaKnown RBP35.55■■■■□ 3.28
TPRA1-203ENST00000393400 CANXP27824 592 aaKnown RBP35.55■■■■□ 3.28
TPRA1-203ENST00000393400 LMOD3Q0VAK6 560 aa35.54■■■■□ 3.28
TPRA1-203ENST00000393400 TSR2Q969E8 191 aaKnown RBP35.54■■■■□ 3.28
TPRA1-203ENST00000393400 SBNO1A3KN83 1393 aa35.52■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms