RNA–Protein interactions for RNA: ENST00000393272.7

NPHP1-203, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 2,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-203ENST00000393272 LRSAM1Q6UWE0 723 aa8.85□□□□□ -0.99
NPHP1-203ENST00000393272 ITPRIPQ8IWB1 547 aa8.85□□□□□ -0.99
NPHP1-203ENST00000393272 TMEM63CQ9P1W3 806 aa8.85□□□□□ -0.99
NPHP1-203ENST00000393272 KIF16BQ96L93 1317 aa8.85□□□□□ -0.99
NPHP1-203ENST00000393272 DISP1Q96F81 1524 aa8.85□□□□□ -0.99
NPHP1-203ENST00000393272 VGLL3A8MV65 326 aa8.85□□□□□ -0.99
NPHP1-203ENST00000393272 PRPF40AO75400 957 aaKnown RBP8.85□□□□□ -0.99
NPHP1-203ENST00000393272 CYP2E1P05181 493 aaPredicted RBP8.85□□□□□ -0.99
NPHP1-203ENST00000393272 TCP11L2Q8N4U5 519 aa8.85□□□□□ -0.99
NPHP1-203ENST00000393272 PRIMPOLQ96LW4 560 aa8.85□□□□□ -0.99
NPHP1-203ENST00000393272 CEP152O94986 1710 aa8.84□□□□□ -0.99
NPHP1-203ENST00000393272 ZBTB22O15209 634 aa8.84□□□□□ -0.99
NPHP1-203ENST00000393272 TSPY4P0CV99 314 aa8.84□□□□□ -0.99
NPHP1-203ENST00000393272 TSPY10P0CW01 314 aa8.84□□□□□ -0.99
NPHP1-203ENST00000393272 TRIM27P14373 513 aa8.84□□□□□ -0.99
NPHP1-203ENST00000393272 HMGN5P82970 282 aaKnown RBP8.84□□□□□ -0.99
NPHP1-203ENST00000393272 NUCB1Q02818 461 aa8.84□□□□□ -0.99
NPHP1-203ENST00000393272 CDCA8Q53HL2 280 aa8.84□□□□□ -0.99
NPHP1-203ENST00000393272 BMP2KLQ5H9B9 411 aa8.84□□□□□ -0.99
NPHP1-203ENST00000393272 MPNDQ8N594 471 aa8.84□□□□□ -0.99
NPHP1-203ENST00000393272 CHAMP1Q96JM3 812 aa8.84□□□□□ -0.99
NPHP1-203ENST00000393272 TBC1D9Q6ZT07 1266 aa8.84□□□□□ -1
NPHP1-203ENST00000393272 NSFL1CQ9UNZ2 370 aaKnown RBP8.84□□□□□ -1
NPHP1-203ENST00000393272 ADAMTS12P58397 1594 aa8.83□□□□□ -1
NPHP1-203ENST00000393272 POLR3AO14802 1390 aaPredicted RBP8.83□□□□□ -1
NPHP1-203ENST00000393272 KDM5AP29375 1690 aaKnown RBP8.83□□□□□ -1
NPHP1-203ENST00000393272 NUCB2P80303 420 aa8.83□□□□□ -1
NPHP1-203ENST00000393272 WDR63Q8IWG1 891 aa8.83□□□□□ -1
NPHP1-203ENST00000393272 IPO4Q8TEX9 1081 aaKnown RBP8.83□□□□□ -1
NPHP1-203ENST00000393272 RUNDC1Q96C34 613 aa8.83□□□□□ -1
NPHP1-203ENST00000393272 BCL2L12Q9HB09 334 aa8.83□□□□□ -1
NPHP1-203ENST00000393272 CGNQ9P2M7 1197 aaKnown RBP8.83□□□□□ -1
NPHP1-203ENST00000393272 DDX19BQ9UMR2 479 aa8.83□□□□□ -1
NPHP1-203ENST00000393272 KIF3AQ9Y496 699 aa8.83□□□□□ -1
NPHP1-203ENST00000393272 C17orf53Q8N3J3 647 aaPredicted RBP8.83□□□□□ -1
NPHP1-203ENST00000393272 SMC4Q9NTJ3 1288 aa8.83□□□□□ -1
NPHP1-203ENST00000393272 CHD1LQ86WJ1 897 aa8.82□□□□□ -1
NPHP1-203ENST00000393272 ZNF830Q96NB3 372 aaPredicted RBP8.82□□□□□ -1
NPHP1-203ENST00000393272 MADDQ8WXG6 1647 aa8.82□□□□□ -1
NPHP1-203ENST00000393272 U2AF2P26368 475 aaKnown RBP eCLIP8.82□□□□□ -1
NPHP1-203ENST00000393272 PDCL2Q8N4E4 241 aa8.82□□□□□ -1
NPHP1-203ENST00000393272 PIBF1Q8WXW3 757 aa8.82□□□□□ -1
NPHP1-203ENST00000393272 CARD14Q9BXL6 1004 aa8.82□□□□□ -1
NPHP1-203ENST00000393272 KANK1Q14678 1352 aa8.81□□□□□ -1
NPHP1-203ENST00000393272 NOLC1Q14978 699 aaKnown RBP eCLIP8.81□□□□□ -1
NPHP1-203ENST00000393272 HNRNPMP52272 730 aaKnown RBP eCLIP8.81□□□□□ -1
NPHP1-203ENST00000393272 TSR2Q969E8 191 aaKnown RBP8.81□□□□□ -1
NPHP1-203ENST00000393272 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.81□□□□□ -1
NPHP1-203ENST00000393272 ZBTB40Q9NUA8 1239 aa8.81□□□□□ -1
NPHP1-203ENST00000393272 TARBP1Q13395 1621 aaKnown RBP8.81□□□□□ -1
NPHP1-203ENST00000393272 PLB1Q6P1J6 1458 aa8.81□□□□□ -1
NPHP1-203ENST00000393272 TAF3Q5VWG9 929 aa8.8□□□□□ -1
NPHP1-203ENST00000393272 ZGPATQ8N5A5 531 aaKnown RBP8.8□□□□□ -1
NPHP1-203ENST00000393272 TMEM57Q8N5G2 664 aa8.8□□□□□ -1
NPHP1-203ENST00000393272 ZDHHC9Q9Y397 364 aa8.8□□□□□ -1
NPHP1-203ENST00000393272 PDS5BQ9NTI5 1447 aa8.8□□□□□ -1
NPHP1-203ENST00000393272 SCAF11Q99590 1463 aaKnown RBP8.8□□□□□ -1
NPHP1-203ENST00000393272 UNC13BO14795 1591 aa8.8□□□□□ -1
NPHP1-203ENST00000393272 ATF7IPQ6VMQ6 1270 aa8.8□□□□□ -1
NPHP1-203ENST00000393272 FKBP5Q13451 457 aaPredicted RBP8.79□□□□□ -1
NPHP1-203ENST00000393272 PLCD3Q8N3E9 789 aa8.79□□□□□ -1
NPHP1-203ENST00000393272 SSH1Q8WYL5 1049 aa8.79□□□□□ -1
NPHP1-203ENST00000393272 TTC12Q9H892 705 aaPredicted RBP8.79□□□□□ -1
NPHP1-203ENST00000393272 ZNF771Q7L3S4 317 aaPredicted RBP8.79□□□□□ -1
NPHP1-203ENST00000393272 ARHGEF5Q12774 1597 aa8.79□□□□□ -1
NPHP1-203ENST00000393272 RABEP1Q15276 862 aa8.78□□□□□ -1
NPHP1-203ENST00000393272 CCDC27Q2M243 656 aa8.78□□□□□ -1
NPHP1-203ENST00000393272 ANKRD45Q5TZF3 282 aa8.78□□□□□ -1
NPHP1-203ENST00000393272 TSPY26PQ9H489 355 aa8.78□□□□□ -1
NPHP1-203ENST00000393272 NOB1Q9ULX3 412 aaKnown RBP8.78□□□□□ -1
NPHP1-203ENST00000393272 EXOSC9Q06265 439 aaKnown RBP8.78□□□□□ -1
NPHP1-203ENST00000393272 FOXD4L5Q5VV16 416 aaPredicted RBP8.78□□□□□ -1
NPHP1-203ENST00000393272 FOXD4L4Q8WXT5 416 aaPredicted RBP8.78□□□□□ -1
NPHP1-203ENST00000393272 ANKRD7Q92527 254 aa8.78□□□□□ -1
NPHP1-203ENST00000393272 SPTLC3Q9NUV7 552 aa8.78□□□□□ -1
NPHP1-203ENST00000393272 IQGAP3Q86VI3 1631 aa8.77□□□□□ -1
NPHP1-203ENST00000393272 CDK11BP21127 795 aaKnown RBP8.77□□□□□ -1.01
NPHP1-203ENST00000393272 USP25Q9UHP3 1055 aa8.77□□□□□ -1.01
NPHP1-203ENST00000393272 TTC37Q6PGP7 1564 aa8.77□□□□□ -1.01
NPHP1-203ENST00000393272 RIOK3O14730 519 aaKnown RBP8.77□□□□□ -1.01
NPHP1-203ENST00000393272 CDC45O75419 566 aa8.77□□□□□ -1.01
NPHP1-203ENST00000393272 MBD3O95983 291 aa8.77□□□□□ -1.01
NPHP1-203ENST00000393272 CWC22Q9HCG8 908 aaKnown RBP8.77□□□□□ -1.01
NPHP1-203ENST00000393272 TAF7LQ5H9L4 462 aa8.76□□□□□ -1.01
NPHP1-203ENST00000393272 ATP10AO60312 1499 aa8.76□□□□□ -1.01
NPHP1-203ENST00000393272 ERVK-7P63135 1459 aa8.76□□□□□ -1.01
NPHP1-203ENST00000393272 NOS1P29475 1434 aa8.76□□□□□ -1.01
NPHP1-203ENST00000393272 SPHKAPQ2M3C7 1700 aa8.76□□□□□ -1.01
NPHP1-203ENST00000393272 IRX5P78411 483 aaPredicted RBP8.76□□□□□ -1.01
NPHP1-203ENST00000393272 MAPK8IP2Q13387 824 aaPredicted RBP8.76□□□□□ -1.01
NPHP1-203ENST00000393272 PPIP5K1Q6PFW1 1433 aa8.76□□□□□ -1.01
NPHP1-203ENST00000393272 CT47B1P0C2W7 299 aaPredicted RBP8.75□□□□□ -1.01
NPHP1-203ENST00000393272 CLTCL1P53675 1640 aa8.75□□□□□ -1.01
NPHP1-203ENST00000393272 ADGRB2O60241 1585 aa8.75□□□□□ -1.01
NPHP1-203ENST00000393272 GSPT1P15170 499 aaKnown RBP8.75□□□□□ -1.01
NPHP1-203ENST00000393272 FEZ1Q99689 392 aa8.75□□□□□ -1.01
NPHP1-203ENST00000393272 PPRC1Q5VV67 1664 aaKnown RBP8.75□□□□□ -1.01
NPHP1-203ENST00000393272 MORC1Q86VD1 984 aa8.74□□□□□ -1.01
NPHP1-203ENST00000393272 C1orf115Q9H7X2 142 aa8.74□□□□□ -1.01
NPHP1-203ENST00000393272 ZNF518AQ6AHZ1 1483 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms