RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 RALBP1Q15311 655 aa14.82□□□□□ -0.04
PDGFD-202ENST00000393158 PNISRQ8TF01 805 aaKnown RBP14.82□□□□□ -0.04
PDGFD-202ENST00000393158 NFAT5O94916 1531 aa14.82□□□□□ -0.04
PDGFD-202ENST00000393158 NSD2O96028 1365 aa14.82□□□□□ -0.04
PDGFD-202ENST00000393158 PPP2R1AP30153 589 aa14.82□□□□□ -0.04
PDGFD-202ENST00000393158 ACEP12821 1306 aa14.81□□□□□ -0.04
PDGFD-202ENST00000393158 PXDNQ92626 1479 aa14.81□□□□□ -0.04
PDGFD-202ENST00000393158 ZRANB1Q9UGI0 708 aa14.8□□□□□ -0.04
PDGFD-202ENST00000393158 MED1Q15648 1581 aaPredicted RBP14.8□□□□□ -0.04
PDGFD-202ENST00000393158 RGPD5Q99666 1765 aa14.8□□□□□ -0.04
PDGFD-202ENST00000393158 TMC1Q8TDI8 760 aa14.8□□□□□ -0.04
PDGFD-202ENST00000393158 BLMP54132 1417 aaPredicted RBP14.8□□□□□ -0.04
PDGFD-202ENST00000393158 PNPLA6Q8IY17 1366 aa14.79□□□□□ -0.04
PDGFD-202ENST00000393158 COL18A1P39060 1754 aa14.79□□□□□ -0.04
PDGFD-202ENST00000393158 RGPD2P0DJD1 1756 aa14.78□□□□□ -0.04
PDGFD-202ENST00000393158 USP31Q70CQ4 1352 aa14.78□□□□□ -0.04
PDGFD-202ENST00000393158 SLIT3O75094 1523 aa14.78□□□□□ -0.04
PDGFD-202ENST00000393158 KNSTRNQ9Y448 316 aa14.78□□□□□ -0.04
PDGFD-202ENST00000393158 NUTM2FA1L443 756 aa14.77□□□□□ -0.04
PDGFD-202ENST00000393158 FBLN1P23142 703 aa14.76□□□□□ -0.05
PDGFD-202ENST00000393158 INSRP06213 1382 aa14.76□□□□□ -0.05
PDGFD-202ENST00000393158 NME9Q86XW9 330 aa14.75□□□□□ -0.05
PDGFD-202ENST00000393158 IQSEC2Q5JU85 1478 aa14.75□□□□□ -0.05
PDGFD-202ENST00000393158 CAMTA1Q9Y6Y1 1673 aa14.75□□□□□ -0.05
PDGFD-202ENST00000393158 CGNL1Q0VF96 1302 aa14.75□□□□□ -0.05
PDGFD-202ENST00000393158 ROBO1Q9Y6N7 1651 aa14.75□□□□□ -0.05
PDGFD-202ENST00000393158 ORAI2Q96SN7 254 aa14.75□□□□□ -0.05
PDGFD-202ENST00000393158 DLG5Q8TDM6 1919 aa14.75□□□□□ -0.05
PDGFD-202ENST00000393158 NLRP13Q86W25 1043 aa14.74□□□□□ -0.05
PDGFD-202ENST00000393158 TTC21BQ7Z4L5 1316 aa14.74□□□□□ -0.05
PDGFD-202ENST00000393158 GGNBP2Q9H3C7 697 aa14.74□□□□□ -0.05
PDGFD-202ENST00000393158 PMFBP1Q8TBY8 1022 aa14.73□□□□□ -0.05
PDGFD-202ENST00000393158 C19orf44Q9H6X5 657 aa14.73□□□□□ -0.05
PDGFD-202ENST00000393158 AATKQ6ZMQ8 1374 aa14.73□□□□□ -0.05
PDGFD-202ENST00000393158 TERF2IPQ9NYB0 399 aa14.73□□□□□ -0.05
PDGFD-202ENST00000393158 LMO7Q8WWI1 1683 aa14.73□□□□□ -0.05
PDGFD-202ENST00000393158 CNGB1Q14028 1251 aaPredicted RBP14.72□□□□□ -0.05
PDGFD-202ENST00000393158 CDK12Q9NYV4 1490 aaPredicted RBP14.72□□□□□ -0.05
PDGFD-202ENST00000393158 PROSER2Q86WR7 435 aaPredicted RBP14.71□□□□□ -0.05
PDGFD-202ENST00000393158 MRS2Q9HD23 443 aa14.7□□□□□ -0.06
PDGFD-202ENST00000393158 VIRMAQ69YN4 1812 aaKnown RBP14.69□□□□□ -0.06
PDGFD-202ENST00000393158 ZNF692Q9BU19 519 aaPredicted RBP14.69□□□□□ -0.06
PDGFD-202ENST00000393158 COL22A1Q8NFW1 1626 aaPredicted RBP14.69□□□□□ -0.06
PDGFD-202ENST00000393158 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.68□□□□□ -0.06
PDGFD-202ENST00000393158 POLKQ9UBT6 870 aa14.68□□□□□ -0.06
PDGFD-202ENST00000393158 AHDC1Q5TGY3 1603 aaPredicted RBP14.68□□□□□ -0.06
PDGFD-202ENST00000393158 HDGFL2Q7Z4V5 671 aaPredicted RBP14.67□□□□□ -0.06
PDGFD-202ENST00000393158 PHF8Q9UPP1 1060 aa14.67□□□□□ -0.06
PDGFD-202ENST00000393158 COL16A1Q07092 1604 aaPredicted RBP14.67□□□□□ -0.06
PDGFD-202ENST00000393158 FAM208AQ9UK61 1670 aaKnown RBP14.66□□□□□ -0.06
PDGFD-202ENST00000393158 DDX17Q92841 729 aaKnown RBP14.66□□□□□ -0.06
PDGFD-202ENST00000393158 TTC21AQ8NDW8 1320 aa14.66□□□□□ -0.06
PDGFD-202ENST00000393158 MTHFSP49914 203 aa14.65□□□□□ -0.06
PDGFD-202ENST00000393158 BRINP3Q76B58 766 aa14.64□□□□□ -0.07
PDGFD-202ENST00000393158 YTHDC1Q96MU7 727 aaKnown RBP14.64□□□□□ -0.07
PDGFD-202ENST00000393158 ADAMTS8Q9UP79 889 aa14.64□□□□□ -0.07
PDGFD-202ENST00000393158 USP19O94966 1318 aa14.64□□□□□ -0.07
PDGFD-202ENST00000393158 MORC1Q86VD1 984 aa14.63□□□□□ -0.07
PDGFD-202ENST00000393158 MSH6P52701 1360 aa14.63□□□□□ -0.07
PDGFD-202ENST00000393158 ZNF521Q96K83 1311 aa14.63□□□□□ -0.07
PDGFD-202ENST00000393158 TNNT2P45379 298 aaPredicted RBP14.62□□□□□ -0.07
PDGFD-202ENST00000393158 EMILIN1Q9Y6C2 1016 aa14.62□□□□□ -0.07
PDGFD-202ENST00000393158 ESCO1Q5FWF5 840 aa14.62□□□□□ -0.07
PDGFD-202ENST00000393158 NCAPD2Q15021 1401 aa14.61□□□□□ -0.07
PDGFD-202ENST00000393158 PLEKHF1Q96S99 279 aa14.61□□□□□ -0.07
PDGFD-202ENST00000393158 FAM9BQ8IZU0 186 aa14.61□□□□□ -0.07
PDGFD-202ENST00000393158 SBNO1A3KN83 1393 aa14.6□□□□□ -0.07
PDGFD-202ENST00000393158 SOS2Q07890 1332 aaPredicted RBP14.6□□□□□ -0.07
PDGFD-202ENST00000393158 SHANK3Q9BYB0 1731 aa14.6□□□□□ -0.07
PDGFD-202ENST00000393158 FOXO3O43524 673 aa14.6□□□□□ -0.07
PDGFD-202ENST00000393158 DMRT2Q9Y5R5 561 aa14.59□□□□□ -0.07
PDGFD-202ENST00000393158 TNS3Q68CZ2 1445 aa14.59□□□□□ -0.07
PDGFD-202ENST00000393158 RRS1Q15050 365 aaKnown RBP14.59□□□□□ -0.07
PDGFD-202ENST00000393158 PHLPP1O60346 1717 aa14.59□□□□□ -0.07
PDGFD-202ENST00000393158 CADPS2Q86UW7 1296 aa14.59□□□□□ -0.07
PDGFD-202ENST00000393158 IL13P35225 146 aa14.58□□□□□ -0.07
PDGFD-202ENST00000393158 XPCQ01831 940 aaPredicted RBP14.58□□□□□ -0.07
PDGFD-202ENST00000393158 PHF23Q9BUL5 403 aaPredicted RBP14.58□□□□□ -0.08
PDGFD-202ENST00000393158 SLAIN2Q9P270 581 aa14.58□□□□□ -0.08
PDGFD-202ENST00000393158 LRRC37A3O60309 1634 aa14.58□□□□□ -0.08
PDGFD-202ENST00000393158 ABCC6O95255 1503 aa14.58□□□□□ -0.08
PDGFD-202ENST00000393158 MAP3K19Q56UN5 1328 aa14.58□□□□□ -0.08
PDGFD-202ENST00000393158 ZBED9Q6R2W3 1325 aa14.58□□□□□ -0.08
PDGFD-202ENST00000393158 NGDNQ8NEJ9 315 aaKnown RBP14.57□□□□□ -0.08
PDGFD-202ENST00000393158 WNK3Q9BYP7 1800 aa14.56□□□□□ -0.08
PDGFD-202ENST00000393158 ADAMTS7Q9UKP4 1686 aa14.56□□□□□ -0.08
PDGFD-202ENST00000393158 NRAPQ86VF7 1730 aa14.55□□□□□ -0.08
PDGFD-202ENST00000393158 SENP3-EIF4A1A0A087X0R7 540 aa14.55□□□□□ -0.08
PDGFD-202ENST00000393158 SPATA31A3Q5VYP0 1347 aa14.55□□□□□ -0.08
PDGFD-202ENST00000393158 COG3Q96JB2 828 aa14.54□□□□□ -0.08
PDGFD-202ENST00000393158 SIPA1L3O60292 1781 aaPredicted RBP14.54□□□□□ -0.08
PDGFD-202ENST00000393158 ATF3P18847 181 aa14.54□□□□□ -0.08
PDGFD-202ENST00000393158 KDRP35968 1356 aa14.54□□□□□ -0.08
PDGFD-202ENST00000393158 EP400Q96L91 3159 aa14.54□□□□□ -0.08
PDGFD-202ENST00000393158 NUTM2GQ5VZR2 741 aa14.53□□□□□ -0.08
PDGFD-202ENST00000393158 PLCH1Q4KWH8 1693 aa14.53□□□□□ -0.08
PDGFD-202ENST00000393158 KRT28Q7Z3Y7 464 aa14.53□□□□□ -0.08
PDGFD-202ENST00000393158 GTF3C3Q9Y5Q9 886 aa14.53□□□□□ -0.08
PDGFD-202ENST00000393158 KIF24Q5T7B8 1368 aa14.53□□□□□ -0.08
PDGFD-202ENST00000393158 PKD1L3Q7Z443 1732 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms