RNA–Protein interactions for RNA: ENST00000392914.3

PARPBP-204, Transcript of PARP1 binding protein, humanhuman

TSL 2

Gene PARPBP, Length 833 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBP-204ENST00000392914 KTN1Q86UP2 1357 aaKnown RBP11.51□□□□□ -0.57
PARPBP-204ENST00000392914 RXRBP28702 533 aa11.5□□□□□ -0.57
PARPBP-204ENST00000392914 LMOD2Q6P5Q4 547 aa11.5□□□□□ -0.57
PARPBP-204ENST00000392914 TESK2Q96S53 571 aa11.5□□□□□ -0.57
PARPBP-204ENST00000392914 CCDC61Q9Y6R9 512 aa11.5□□□□□ -0.57
PARPBP-204ENST00000392914 KIF7Q2M1P5 1343 aa11.5□□□□□ -0.57
PARPBP-204ENST00000392914 TNS3Q68CZ2 1445 aa11.5□□□□□ -0.57
PARPBP-204ENST00000392914 COL22A1Q8NFW1 1626 aaPredicted RBP11.49□□□□□ -0.57
PARPBP-204ENST00000392914 SRPK2P78362 688 aaKnown RBP11.49□□□□□ -0.57
PARPBP-204ENST00000392914 RGPD8O14715 1765 aaPredicted RBP11.49□□□□□ -0.57
PARPBP-204ENST00000392914 POTEHQ6S545 545 aa11.48□□□□□ -0.57
PARPBP-204ENST00000392914 PRR36Q9H6K5 1346 aa11.48□□□□□ -0.57
PARPBP-204ENST00000392914 ITSN1Q15811 1721 aa11.48□□□□□ -0.57
PARPBP-204ENST00000392914 USP32Q8NFA0 1604 aa11.47□□□□□ -0.57
PARPBP-204ENST00000392914 NINLQ9Y2I6 1382 aa11.47□□□□□ -0.57
PARPBP-204ENST00000392914 RBM6P78332 1123 aaKnown RBP11.47□□□□□ -0.57
PARPBP-204ENST00000392914 FNBP4Q8N3X1 1017 aaPredicted RBP11.47□□□□□ -0.57
PARPBP-204ENST00000392914 QTRT2Q9H974 415 aaKnown RBP11.47□□□□□ -0.57
PARPBP-204ENST00000392914 USP21Q9UK80 565 aa11.47□□□□□ -0.57
PARPBP-204ENST00000392914 TRPC5Q9UL62 973 aaPredicted RBP11.47□□□□□ -0.57
PARPBP-204ENST00000392914 ATP7BP35670 1465 aa11.46□□□□□ -0.57
PARPBP-204ENST00000392914 PLEKHG3A1L390 1219 aa11.46□□□□□ -0.57
PARPBP-204ENST00000392914 CCER2I3L3R5 266 aa11.46□□□□□ -0.57
PARPBP-204ENST00000392914 PAK3O75914 559 aaPredicted RBP11.46□□□□□ -0.57
PARPBP-204ENST00000392914 POLR3GLQ9BT43 218 aa11.46□□□□□ -0.57
PARPBP-204ENST00000392914 BRD4O60885 1362 aaPredicted RBP11.45□□□□□ -0.58
PARPBP-204ENST00000392914 CDK12Q9NYV4 1490 aaPredicted RBP11.44□□□□□ -0.58
PARPBP-204ENST00000392914 POLR3AO14802 1390 aaPredicted RBP11.44□□□□□ -0.58
PARPBP-204ENST00000392914 ACEP12821 1306 aa11.44□□□□□ -0.58
PARPBP-204ENST00000392914 C11orf95C9JLR9 678 aaPredicted RBP11.44□□□□□ -0.58
PARPBP-204ENST00000392914 RALBP1Q15311 655 aa11.44□□□□□ -0.58
PARPBP-204ENST00000392914 KNSTRNQ9Y448 316 aa11.44□□□□□ -0.58
PARPBP-204ENST00000392914 QRICH2Q9H0J4 1663 aa11.43□□□□□ -0.58
PARPBP-204ENST00000392914 CABP2Q9NPB3 220 aa11.43□□□□□ -0.58
PARPBP-204ENST00000392914 PPIP5K1Q6PFW1 1433 aa11.43□□□□□ -0.58
PARPBP-204ENST00000392914 UNC5CLQ8IV45 518 aa11.42□□□□□ -0.58
PARPBP-204ENST00000392914 ZNF692Q9BU19 519 aaPredicted RBP11.42□□□□□ -0.58
PARPBP-204ENST00000392914 TERF2IPQ9NYB0 399 aa11.42□□□□□ -0.58
PARPBP-204ENST00000392914 ATAD2Q6PL18 1390 aa11.41□□□□□ -0.58
PARPBP-204ENST00000392914 MARF1Q9Y4F3 1742 aaKnown RBP11.41□□□□□ -0.58
PARPBP-204ENST00000392914 MIER1Q8N108 512 aa11.41□□□□□ -0.58
PARPBP-204ENST00000392914 CABLES1Q8TDN4 633 aa11.41□□□□□ -0.58
PARPBP-204ENST00000392914 PLEKHG5O94827 1062 aa11.4□□□□□ -0.58
PARPBP-204ENST00000392914 NLRP13Q86W25 1043 aa11.4□□□□□ -0.58
PARPBP-204ENST00000392914 ABTB2Q8N961 1025 aa11.4□□□□□ -0.58
PARPBP-204ENST00000392914 CABP1Q9NZU7 370 aa11.4□□□□□ -0.58
PARPBP-204ENST00000392914 TRPM3Q9HCF6 1732 aaPredicted RBP11.4□□□□□ -0.58
PARPBP-204ENST00000392914 TOPAZ1Q8N9V7 1692 aa11.4□□□□□ -0.59
PARPBP-204ENST00000392914 ATRNO75882 1429 aa11.39□□□□□ -0.59
PARPBP-204ENST00000392914 ALS2Q96Q42 1657 aa11.39□□□□□ -0.59
PARPBP-204ENST00000392914 SLIT2O94813 1529 aa11.39□□□□□ -0.59
PARPBP-204ENST00000392914 GJD4Q96KN9 370 aaPredicted RBP11.38□□□□□ -0.59
PARPBP-204ENST00000392914 PRKRIP1Q9H875 184 aaPredicted RBP11.38□□□□□ -0.59
PARPBP-204ENST00000392914 PANK3Q9H999 370 aa11.38□□□□□ -0.59
PARPBP-204ENST00000392914 PRDM11Q9NQV5 511 aa11.38□□□□□ -0.59
PARPBP-204ENST00000392914 NPC1L1Q9UHC9 1359 aa11.38□□□□□ -0.59
PARPBP-204ENST00000392914 BCL9LQ86UU0 1499 aa11.38□□□□□ -0.59
PARPBP-204ENST00000392914 VPS72Q15906 364 aa11.37□□□□□ -0.59
PARPBP-204ENST00000392914 HDGFL2Q7Z4V5 671 aaPredicted RBP11.37□□□□□ -0.59
PARPBP-204ENST00000392914 CCDC9Q9Y3X0 531 aaKnown RBP11.37□□□□□ -0.59
PARPBP-204ENST00000392914 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.36□□□□□ -0.59
PARPBP-204ENST00000392914 FAM83GA6ND36 823 aa11.36□□□□□ -0.59
PARPBP-204ENST00000392914 PER1O15534 1290 aaPredicted RBP11.36□□□□□ -0.59
PARPBP-204ENST00000392914 TMC1Q8TDI8 760 aa11.36□□□□□ -0.59
PARPBP-204ENST00000392914 TTC21AQ8NDW8 1320 aa11.35□□□□□ -0.59
PARPBP-204ENST00000392914 USP6P35125 1406 aa11.35□□□□□ -0.59
PARPBP-204ENST00000392914 NWD2Q9ULI1 1742 aa11.35□□□□□ -0.59
PARPBP-204ENST00000392914 NLRP6P59044 892 aa11.35□□□□□ -0.59
PARPBP-204ENST00000392914 BTG4Q9NY30 223 aa11.35□□□□□ -0.59
PARPBP-204ENST00000392914 ABCA3Q99758 1704 aa11.35□□□□□ -0.59
PARPBP-204ENST00000392914 RGS12O14924 1447 aa11.35□□□□□ -0.59
PARPBP-204ENST00000392914 NUTM2GQ5VZR2 741 aa11.34□□□□□ -0.59
PARPBP-204ENST00000392914 CGNL1Q0VF96 1302 aa11.34□□□□□ -0.59
PARPBP-204ENST00000392914 COL14A1Q05707 1796 aaKnown RBP11.33□□□□□ -0.59
PARPBP-204ENST00000392914 NSD2O96028 1365 aa11.33□□□□□ -0.6
PARPBP-204ENST00000392914 GCP02774 474 aa11.33□□□□□ -0.6
PARPBP-204ENST00000392914 ZC3H6P61129 1189 aaKnown RBP11.33□□□□□ -0.6
PARPBP-204ENST00000392914 USP19O94966 1318 aa11.33□□□□□ -0.6
PARPBP-204ENST00000392914 ANKRD36BQ8N2N9 1353 aa11.32□□□□□ -0.6
PARPBP-204ENST00000392914 KIAA0232Q92628 1395 aa11.32□□□□□ -0.6
PARPBP-204ENST00000392914 CENPBP07199 599 aaPredicted RBP11.32□□□□□ -0.6
PARPBP-204ENST00000392914 EVA1CP58658 441 aa11.32□□□□□ -0.6
PARPBP-204ENST00000392914 KCNH5Q8NCM2 988 aa11.32□□□□□ -0.6
PARPBP-204ENST00000392914 UPF1Q92900 1129 aaKnown RBP eCLIP11.32□□□□□ -0.6
PARPBP-204ENST00000392914 TTC21BQ7Z4L5 1316 aa11.32□□□□□ -0.6
PARPBP-204ENST00000392914 MYBBP1AQ9BQG0 1328 aaKnown RBP11.32□□□□□ -0.6
PARPBP-204ENST00000392914 CPDO75976 1380 aa11.31□□□□□ -0.6
PARPBP-204ENST00000392914 PLCH1Q4KWH8 1693 aa11.31□□□□□ -0.6
PARPBP-204ENST00000392914 CPSF1Q10570 1443 aaKnown RBP11.31□□□□□ -0.6
PARPBP-204ENST00000392914 SSH2Q76I76 1423 aa11.3□□□□□ -0.6
PARPBP-204ENST00000392914 A0A0G2JS52 829 aa11.3□□□□□ -0.6
PARPBP-204ENST00000392914 ONECUT3O60422 494 aaPredicted RBP11.3□□□□□ -0.6
PARPBP-204ENST00000392914 MYT1Q01538 1121 aa11.3□□□□□ -0.6
PARPBP-204ENST00000392914 CCDC125Q86Z20 511 aa11.3□□□□□ -0.6
PARPBP-204ENST00000392914 SLC12A5Q9H2X9 1139 aa11.3□□□□□ -0.6
PARPBP-204ENST00000392914 CRYBG1Q9Y4K1 1723 aa11.29□□□□□ -0.6
PARPBP-204ENST00000392914 PHRF1Q9P1Y6 1649 aaKnown RBP11.29□□□□□ -0.6
PARPBP-204ENST00000392914 CHRNA2Q15822 529 aa11.29□□□□□ -0.6
PARPBP-204ENST00000392914 SEPT12Q8IYM1 358 aa11.29□□□□□ -0.6
PARPBP-204ENST00000392914 RNF216Q9NWF9 866 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms