RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 TBX22Q9Y458 520 aa23.9■■□□□ 1.42
TRAF3-203ENST00000392745 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.9■■□□□ 1.42
TRAF3-203ENST00000392745 ATP7BP35670 1465 aa23.89■■□□□ 1.42
TRAF3-203ENST00000392745 PPIP5K1Q6PFW1 1433 aa23.89■■□□□ 1.41
TRAF3-203ENST00000392745 ANKRD26Q9UPS8 1709 aa23.89■■□□□ 1.41
TRAF3-203ENST00000392745 APAF1O14727 1248 aa23.89■■□□□ 1.41
TRAF3-203ENST00000392745 ADAMTSL3P82987 1691 aa23.88■■□□□ 1.41
TRAF3-203ENST00000392745 CEP170BQ9Y4F5 1589 aaPredicted RBP23.88■■□□□ 1.41
TRAF3-203ENST00000392745 ZNF521Q96K83 1311 aa23.88■■□□□ 1.41
TRAF3-203ENST00000392745 AMOTL2Q9Y2J4 779 aa23.88■■□□□ 1.41
TRAF3-203ENST00000392745 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.87■■□□□ 1.41
TRAF3-203ENST00000392745 CCDC61Q9Y6R9 512 aa23.87■■□□□ 1.41
TRAF3-203ENST00000392745 CPSF1Q10570 1443 aaKnown RBP23.87■■□□□ 1.41
TRAF3-203ENST00000392745 PRR36Q9H6K5 1346 aa23.86■■□□□ 1.41
TRAF3-203ENST00000392745 KIF20BQ96Q89 1820 aa23.85■■□□□ 1.41
TRAF3-203ENST00000392745 C20orf194Q5TEA3 1177 aa23.85■■□□□ 1.41
TRAF3-203ENST00000392745 CFAP53Q96M91 514 aa23.85■■□□□ 1.41
TRAF3-203ENST00000392745 DDRGK1Q96HY6 314 aa23.82■■□□□ 1.4
TRAF3-203ENST00000392745 ADGRB2O60241 1585 aa23.81■■□□□ 1.4
TRAF3-203ENST00000392745 SLC4A3P48751 1232 aa23.81■■□□□ 1.4
TRAF3-203ENST00000392745 SETD1BQ9UPS6 1966 aaKnown RBP23.8■■□□□ 1.4
TRAF3-203ENST00000392745 CDC42BPGQ6DT37 1551 aa23.8■■□□□ 1.4
TRAF3-203ENST00000392745 GOLGA2Q08379 1002 aa23.79■■□□□ 1.4
TRAF3-203ENST00000392745 DIP2AQ14689 1571 aa23.79■■□□□ 1.4
TRAF3-203ENST00000392745 NUTM2FA1L443 756 aa23.79■■□□□ 1.4
TRAF3-203ENST00000392745 FBLN1P23142 703 aa23.79■■□□□ 1.4
TRAF3-203ENST00000392745 DUSP27Q5VZP5 1158 aa23.78■■□□□ 1.4
TRAF3-203ENST00000392745 EDC4Q6P2E9 1401 aaKnown RBP23.78■■□□□ 1.4
TRAF3-203ENST00000392745 PRKCSHP14314 528 aaPredicted RBP23.78■■□□□ 1.4
TRAF3-203ENST00000392745 KDM2BQ8NHM5 1336 aa23.77■■□□□ 1.4
TRAF3-203ENST00000392745 RUNDC1Q96C34 613 aa23.77■■□□□ 1.4
TRAF3-203ENST00000392745 AKAP12Q02952 1782 aa23.77■■□□□ 1.4
TRAF3-203ENST00000392745 NME9Q86XW9 330 aa23.76■■□□□ 1.39
TRAF3-203ENST00000392745 SPINK5Q9NQ38 1064 aaPredicted RBP23.76■■□□□ 1.39
TRAF3-203ENST00000392745 MON2Q7Z3U7 1717 aa23.76■■□□□ 1.39
TRAF3-203ENST00000392745 PTCH1Q13635 1447 aa23.76■■□□□ 1.39
TRAF3-203ENST00000392745 ZRANB1Q9UGI0 708 aa23.76■■□□□ 1.39
TRAF3-203ENST00000392745 COL3A1P02461 1466 aaPredicted RBP23.76■■□□□ 1.39
TRAF3-203ENST00000392745 SLFN5Q08AF3 891 aa23.75■■□□□ 1.39
TRAF3-203ENST00000392745 ZNF142P52746 1687 aaPredicted RBP23.75■■□□□ 1.39
TRAF3-203ENST00000392745 NFKBIBQ15653 356 aa23.75■■□□□ 1.39
TRAF3-203ENST00000392745 U2AF1L5P0DN76 240 aaPredicted RBP23.74■■□□□ 1.39
TRAF3-203ENST00000392745 U2AF1Q01081 240 aaKnown RBP eCLIP23.74■■□□□ 1.39
TRAF3-203ENST00000392745 DMRT2Q9Y5R5 561 aa23.74■■□□□ 1.39
TRAF3-203ENST00000392745 ITSN1Q15811 1721 aa23.74■■□□□ 1.39
TRAF3-203ENST00000392745 ANKLE2Q86XL3 938 aa23.74■■□□□ 1.39
TRAF3-203ENST00000392745 XRN1Q8IZH2 1706 aaKnown RBP23.74■■□□□ 1.39
TRAF3-203ENST00000392745 KCNA6P17658 529 aa23.73■■□□□ 1.39
TRAF3-203ENST00000392745 TRMT2AQ8IZ69 625 aaKnown RBP23.73■■□□□ 1.39
TRAF3-203ENST00000392745 TCP11L2Q8N4U5 519 aa23.73■■□□□ 1.39
TRAF3-203ENST00000392745 ZNF692Q9BU19 519 aaPredicted RBP23.73■■□□□ 1.39
TRAF3-203ENST00000392745 MAP2P11137 1827 aaKnown RBP23.73■■□□□ 1.39
TRAF3-203ENST00000392745 NGEFQ8N5V2 710 aa23.73■■□□□ 1.39
TRAF3-203ENST00000392745 PNPLA6Q8IY17 1366 aa23.72■■□□□ 1.39
TRAF3-203ENST00000392745 TOPAZ1Q8N9V7 1692 aa23.72■■□□□ 1.39
TRAF3-203ENST00000392745 GSE1Q14687 1217 aa23.72■■□□□ 1.39
TRAF3-203ENST00000392745 NEUROD2Q15784 382 aa23.72■■□□□ 1.39
TRAF3-203ENST00000392745 WWC1Q8IX03 1113 aa23.72■■□□□ 1.39
TRAF3-203ENST00000392745 POLKQ9UBT6 870 aa23.72■■□□□ 1.39
TRAF3-203ENST00000392745 RRP7AQ9Y3A4 280 aaKnown RBP23.72■■□□□ 1.39
TRAF3-203ENST00000392745 PLEKHG3A1L390 1219 aa23.71■■□□□ 1.39
TRAF3-203ENST00000392745 BRPF3Q9ULD4 1205 aa23.71■■□□□ 1.39
TRAF3-203ENST00000392745 ACEP12821 1306 aa23.71■■□□□ 1.39
TRAF3-203ENST00000392745 IQSEC2Q5JU85 1478 aa23.71■■□□□ 1.39
TRAF3-203ENST00000392745 U2SURPO15042 1029 aaKnown RBP23.69■■□□□ 1.38
TRAF3-203ENST00000392745 CENPQQ7L2Z9 268 aaPredicted RBP23.69■■□□□ 1.38
TRAF3-203ENST00000392745 NKTRP30414 1462 aaKnown RBP23.69■■□□□ 1.38
TRAF3-203ENST00000392745 PIK3R4Q99570 1358 aa23.69■■□□□ 1.38
TRAF3-203ENST00000392745 RGPD8O14715 1765 aaPredicted RBP23.68■■□□□ 1.38
TRAF3-203ENST00000392745 C8orf34Q49A92 452 aa23.68■■□□□ 1.38
TRAF3-203ENST00000392745 DIAPH1O60610 1272 aaKnown RBP23.67■■□□□ 1.38
TRAF3-203ENST00000392745 PHF23Q9BUL5 403 aaPredicted RBP23.67■■□□□ 1.38
TRAF3-203ENST00000392745 PLEKHF1Q96S99 279 aa23.66■■□□□ 1.38
TRAF3-203ENST00000392745 E9PSI1 815 aa23.66■■□□□ 1.38
TRAF3-203ENST00000392745 FAM161AQ3B820 660 aa23.66■■□□□ 1.38
TRAF3-203ENST00000392745 COG3Q96JB2 828 aa23.66■■□□□ 1.38
TRAF3-203ENST00000392745 DAXXQ9UER7 740 aaPredicted RBP23.66■■□□□ 1.38
TRAF3-203ENST00000392745 CHD2O14647 1828 aaKnown RBP23.65■■□□□ 1.38
TRAF3-203ENST00000392745 FRAT1Q92837 279 aaPredicted RBP23.65■■□□□ 1.38
TRAF3-203ENST00000392745 EMILIN1Q9Y6C2 1016 aa23.65■■□□□ 1.38
TRAF3-203ENST00000392745 TTC21BQ7Z4L5 1316 aa23.65■■□□□ 1.38
TRAF3-203ENST00000392745 PMFBP1Q8TBY8 1022 aa23.64■■□□□ 1.37
TRAF3-203ENST00000392745 NRKQ7Z2Y5 1582 aa23.63■■□□□ 1.37
TRAF3-203ENST00000392745 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.62■■□□□ 1.37
TRAF3-203ENST00000392745 USP6P35125 1406 aa23.62■■□□□ 1.37
TRAF3-203ENST00000392745 AATKQ6ZMQ8 1374 aa23.62■■□□□ 1.37
TRAF3-203ENST00000392745 RGS3P49796 1198 aa23.6■■□□□ 1.37
TRAF3-203ENST00000392745 RRS1Q15050 365 aaKnown RBP23.6■■□□□ 1.37
TRAF3-203ENST00000392745 CCDC27Q2M243 656 aa23.6■■□□□ 1.37
TRAF3-203ENST00000392745 SSH2Q76I76 1423 aa23.59■■□□□ 1.37
TRAF3-203ENST00000392745 RBM33Q96EV2 1170 aaKnown RBP23.59■■□□□ 1.37
TRAF3-203ENST00000392745 NCBP3Q53F19 620 aaKnown RBP23.58■■□□□ 1.37
TRAF3-203ENST00000392745 WDR63Q8IWG1 891 aa23.58■■□□□ 1.37
TRAF3-203ENST00000392745 TMPOP42166 694 aaKnown RBP23.56■■□□□ 1.36
TRAF3-203ENST00000392745 NPHP4O75161 1426 aaPredicted RBP23.56■■□□□ 1.36
TRAF3-203ENST00000392745 FRAT2O75474 233 aaPredicted RBP23.55■■□□□ 1.36
TRAF3-203ENST00000392745 IL13P35225 146 aa23.55■■□□□ 1.36
TRAF3-203ENST00000392745 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.55■■□□□ 1.36
TRAF3-203ENST00000392745 NGDNQ8NEJ9 315 aaKnown RBP23.55■■□□□ 1.36
TRAF3-203ENST00000392745 CDK12Q9NYV4 1490 aaPredicted RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms