RNA–Protein interactions for RNA: ENST00000392590.3

CDCA4-202, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-202ENST00000392590 TRPM3Q9HCF6 1732 aaPredicted RBP29.02■■■□□ 2.24
CDCA4-202ENST00000392590 NGLY1Q96IV0 654 aa29.01■■■□□ 2.23
CDCA4-202ENST00000392590 SLC12A5Q9H2X9 1139 aa29.01■■■□□ 2.23
CDCA4-202ENST00000392590 CDCA8Q53HL2 280 aa29■■■□□ 2.23
CDCA4-202ENST00000392590 BRD4O60885 1362 aaPredicted RBP29■■■□□ 2.23
CDCA4-202ENST00000392590 HSPA5P11021 654 aaKnown RBP28.99■■■□□ 2.23
CDCA4-202ENST00000392590 USP6P35125 1406 aa28.99■■■□□ 2.23
CDCA4-202ENST00000392590 ABTB2Q8N961 1025 aa28.99■■■□□ 2.23
CDCA4-202ENST00000392590 NUTM2GQ5VZR2 741 aa28.98■■■□□ 2.23
CDCA4-202ENST00000392590 ZNF772Q68DY9 489 aaPredicted RBP28.98■■■□□ 2.23
CDCA4-202ENST00000392590 AFF2P51816 1311 aa28.97■■■□□ 2.23
CDCA4-202ENST00000392590 CPSF1Q10570 1443 aaKnown RBP28.96■■■□□ 2.23
CDCA4-202ENST00000392590 ALS2Q96Q42 1657 aa28.96■■■□□ 2.23
CDCA4-202ENST00000392590 HDGFL2Q7Z4V5 671 aaPredicted RBP28.95■■■□□ 2.23
CDCA4-202ENST00000392590 TERF2IPQ9NYB0 399 aa28.95■■■□□ 2.23
CDCA4-202ENST00000392590 KTN1Q86UP2 1357 aaKnown RBP28.95■■■□□ 2.22
CDCA4-202ENST00000392590 POTEAQ6S8J7 498 aa28.94■■■□□ 2.22
CDCA4-202ENST00000392590 ILDR2Q71H61 639 aa28.94■■■□□ 2.22
CDCA4-202ENST00000392590 NINLQ9Y2I6 1382 aa28.93■■■□□ 2.22
CDCA4-202ENST00000392590 SSH2Q76I76 1423 aa28.93■■■□□ 2.22
CDCA4-202ENST00000392590 TTC21BQ7Z4L5 1316 aa28.92■■■□□ 2.22
CDCA4-202ENST00000392590 NLRP13Q86W25 1043 aa28.92■■■□□ 2.22
CDCA4-202ENST00000392590 FNBP4Q8N3X1 1017 aaPredicted RBP28.91■■■□□ 2.22
CDCA4-202ENST00000392590 CD163L1Q9NR16 1453 aa28.89■■■□□ 2.22
CDCA4-202ENST00000392590 NLRP6P59044 892 aa28.89■■■□□ 2.21
CDCA4-202ENST00000392590 USP21Q9UK80 565 aa28.89■■■□□ 2.21
CDCA4-202ENST00000392590 TTC21AQ8NDW8 1320 aa28.88■■■□□ 2.21
CDCA4-202ENST00000392590 A0A1W2PP64 1363 aa28.86■■■□□ 2.21
CDCA4-202ENST00000392590 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.86■■■□□ 2.21
CDCA4-202ENST00000392590 FAM83GA6ND36 823 aa28.85■■■□□ 2.21
CDCA4-202ENST00000392590 QTRT2Q9H974 415 aaKnown RBP28.85■■■□□ 2.21
CDCA4-202ENST00000392590 USP19O94966 1318 aa28.84■■■□□ 2.21
CDCA4-202ENST00000392590 POLR3GLQ9BT43 218 aa28.84■■■□□ 2.21
CDCA4-202ENST00000392590 AKAP12Q02952 1782 aa28.83■■■□□ 2.21
CDCA4-202ENST00000392590 GCP02774 474 aa28.82■■■□□ 2.2
CDCA4-202ENST00000392590 ZC3H6P61129 1189 aaKnown RBP28.81■■■□□ 2.2
CDCA4-202ENST00000392590 PRDM11Q9NQV5 511 aa28.81■■■□□ 2.2
CDCA4-202ENST00000392590 ANKRD36BQ8N2N9 1353 aa28.81■■■□□ 2.2
CDCA4-202ENST00000392590 EDC4Q6P2E9 1401 aaKnown RBP28.81■■■□□ 2.2
CDCA4-202ENST00000392590 ABCA3Q99758 1704 aa28.8■■■□□ 2.2
CDCA4-202ENST00000392590 TRPC5Q9UL62 973 aaPredicted RBP28.8■■■□□ 2.2
CDCA4-202ENST00000392590 RXRBP28702 533 aa28.79■■■□□ 2.2
CDCA4-202ENST00000392590 NME9Q86XW9 330 aa28.79■■■□□ 2.2
CDCA4-202ENST00000392590 UNC5CLQ8IV45 518 aa28.79■■■□□ 2.2
CDCA4-202ENST00000392590 BCL9LQ86UU0 1499 aa28.79■■■□□ 2.2
CDCA4-202ENST00000392590 MARF1Q9Y4F3 1742 aaKnown RBP28.78■■■□□ 2.2
CDCA4-202ENST00000392590 SLIT2O94813 1529 aa28.78■■■□□ 2.2
CDCA4-202ENST00000392590 KIAA0232Q92628 1395 aa28.78■■■□□ 2.2
CDCA4-202ENST00000392590 MON2Q7Z3U7 1717 aa28.77■■■□□ 2.2
CDCA4-202ENST00000392590 ZRANB1Q9UGI0 708 aa28.76■■■□□ 2.19
CDCA4-202ENST00000392590 CRYBG1Q9Y4K1 1723 aa28.75■■■□□ 2.19
CDCA4-202ENST00000392590 C11orf95C9JLR9 678 aaPredicted RBP28.75■■■□□ 2.19
CDCA4-202ENST00000392590 BTG4Q9NY30 223 aa28.75■■■□□ 2.19
CDCA4-202ENST00000392590 NRKQ7Z2Y5 1582 aa28.75■■■□□ 2.19
CDCA4-202ENST00000392590 PIK3C2AO00443 1686 aa28.75■■■□□ 2.19
CDCA4-202ENST00000392590 RBM6P78332 1123 aaKnown RBP28.74■■■□□ 2.19
CDCA4-202ENST00000392590 CHRNA2Q15822 529 aa28.74■■■□□ 2.19
CDCA4-202ENST00000392590 KCNH5Q8NCM2 988 aa28.74■■■□□ 2.19
CDCA4-202ENST00000392590 USP31Q70CQ4 1352 aa28.73■■■□□ 2.19
CDCA4-202ENST00000392590 PHRF1Q9P1Y6 1649 aaKnown RBP28.73■■■□□ 2.19
CDCA4-202ENST00000392590 CPDO75976 1380 aa28.72■■■□□ 2.19
CDCA4-202ENST00000392590 ATRNO75882 1429 aa28.72■■■□□ 2.19
CDCA4-202ENST00000392590 SOX12O15370 315 aa28.71■■■□□ 2.19
CDCA4-202ENST00000392590 SLIT3O75094 1523 aa28.69■■■□□ 2.18
CDCA4-202ENST00000392590 ZBTB7CA1YPR0 619 aa28.69■■■□□ 2.18
CDCA4-202ENST00000392590 GJD4Q96KN9 370 aaPredicted RBP28.69■■■□□ 2.18
CDCA4-202ENST00000392590 CARD14Q9BXL6 1004 aa28.69■■■□□ 2.18
CDCA4-202ENST00000392590 VPS72Q15906 364 aa28.68■■■□□ 2.18
CDCA4-202ENST00000392590 COL14A1Q05707 1796 aaKnown RBP28.68■■■□□ 2.18
CDCA4-202ENST00000392590 CCDC9Q9Y3X0 531 aaKnown RBP28.67■■■□□ 2.18
CDCA4-202ENST00000392590 COG3Q96JB2 828 aa28.65■■■□□ 2.18
CDCA4-202ENST00000392590 KIF7Q2M1P5 1343 aa28.65■■■□□ 2.18
CDCA4-202ENST00000392590 FYB1O15117 783 aa28.64■■■□□ 2.18
CDCA4-202ENST00000392590 MYOM1P52179 1685 aa28.64■■■□□ 2.18
CDCA4-202ENST00000392590 PLCH1Q4KWH8 1693 aa28.64■■■□□ 2.18
CDCA4-202ENST00000392590 EVA1CP58658 441 aa28.64■■■□□ 2.17
CDCA4-202ENST00000392590 ARHGEF25Q86VW2 580 aa28.64■■■□□ 2.17
CDCA4-202ENST00000392590 STRN4Q9NRL3 753 aa28.63■■■□□ 2.17
CDCA4-202ENST00000392590 NWD2Q9ULI1 1742 aa28.62■■■□□ 2.17
CDCA4-202ENST00000392590 NSD3Q9BZ95 1437 aa28.62■■■□□ 2.17
CDCA4-202ENST00000392590 PANK3Q9H999 370 aa28.62■■■□□ 2.17
CDCA4-202ENST00000392590 AATKQ6ZMQ8 1374 aa28.61■■■□□ 2.17
CDCA4-202ENST00000392590 OVOS2A0A0J9YW53 1432 aa28.61■■■□□ 2.17
CDCA4-202ENST00000392590 OVOS2Q6IE36 1432 aa28.61■■■□□ 2.17
CDCA4-202ENST00000392590 GGNBP2Q9H3C7 697 aa28.61■■■□□ 2.17
CDCA4-202ENST00000392590 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.61■■■□□ 2.17
CDCA4-202ENST00000392590 CDK12Q9NYV4 1490 aaPredicted RBP28.6■■■□□ 2.17
CDCA4-202ENST00000392590 SOCS7O14512 581 aa28.59■■■□□ 2.17
CDCA4-202ENST00000392590 NFAT5O94916 1531 aa28.57■■■□□ 2.16
CDCA4-202ENST00000392590 CAMTA1Q9Y6Y1 1673 aa28.57■■■□□ 2.16
CDCA4-202ENST00000392590 CGNL1Q0VF96 1302 aa28.56■■■□□ 2.16
CDCA4-202ENST00000392590 AXIN2Q9Y2T1 843 aa28.56■■■□□ 2.16
CDCA4-202ENST00000392590 SPATA31A5Q5VU36 1347 aa28.55■■■□□ 2.16
CDCA4-202ENST00000392590 SPATA31A7Q8IWB4 1347 aa28.55■■■□□ 2.16
CDCA4-202ENST00000392590 USP54Q70EL1 1684 aa28.55■■■□□ 2.16
CDCA4-202ENST00000392590 RGS12O14924 1447 aa28.55■■■□□ 2.16
CDCA4-202ENST00000392590 ZEB1P37275 1124 aaPredicted RBP28.54■■■□□ 2.16
CDCA4-202ENST00000392590 NRAPQ86VF7 1730 aa28.54■■■□□ 2.16
CDCA4-202ENST00000392590 LARP1Q6PKG0 1096 aaKnown RBP28.53■■■□□ 2.16
CDCA4-202ENST00000392590 CCDC7Q96M83 1385 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms