RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 TNS3Q68CZ2 1445 aa35.15■■■■□ 3.22
HOMER3-202ENST00000392351 PAK3O75914 559 aaPredicted RBP35.15■■■■□ 3.22
HOMER3-202ENST00000392351 ALS2Q96Q42 1657 aa35.15■■■■□ 3.22
HOMER3-202ENST00000392351 SPATA31A3Q5VYP0 1347 aa35.13■■■■□ 3.21
HOMER3-202ENST00000392351 SHPRHQ149N8 1683 aa35.12■■■■□ 3.21
HOMER3-202ENST00000392351 BRD4O60885 1362 aaPredicted RBP35.12■■■■□ 3.21
HOMER3-202ENST00000392351 SSH2Q76I76 1423 aa35.11■■■■□ 3.21
HOMER3-202ENST00000392351 LMOD2Q6P5Q4 547 aa35.09■■■■□ 3.21
HOMER3-202ENST00000392351 JCADQ9P266 1359 aa35.09■■■■□ 3.21
HOMER3-202ENST00000392351 EDC4Q6P2E9 1401 aaKnown RBP35.09■■■■□ 3.21
HOMER3-202ENST00000392351 PNPLA6Q8IY17 1366 aa35.07■■■■□ 3.2
HOMER3-202ENST00000392351 TTC21BQ7Z4L5 1316 aa35.06■■■■□ 3.2
HOMER3-202ENST00000392351 ARHGEF10O15013 1369 aa35.06■■■■□ 3.2
HOMER3-202ENST00000392351 PIK3C2AO00443 1686 aa35.05■■■■□ 3.2
HOMER3-202ENST00000392351 COL22A1Q8NFW1 1626 aaPredicted RBP35.05■■■■□ 3.2
HOMER3-202ENST00000392351 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.04■■■■□ 3.2
HOMER3-202ENST00000392351 PANK3Q9H999 370 aa35.04■■■■□ 3.2
HOMER3-202ENST00000392351 TTC21AQ8NDW8 1320 aa35.02■■■■□ 3.2
HOMER3-202ENST00000392351 ABTB2Q8N961 1025 aa35.02■■■■□ 3.2
HOMER3-202ENST00000392351 NSD3Q9BZ95 1437 aa35.01■■■■□ 3.2
HOMER3-202ENST00000392351 CARD14Q9BXL6 1004 aa35.01■■■■□ 3.2
HOMER3-202ENST00000392351 NUTM2GQ5VZR2 741 aa34.99■■■■□ 3.19
HOMER3-202ENST00000392351 KIF20BQ96Q89 1820 aa34.97■■■■□ 3.19
HOMER3-202ENST00000392351 ZNF316A6NFI3 1004 aaPredicted RBP34.97■■■■□ 3.19
HOMER3-202ENST00000392351 ABCA3Q99758 1704 aa34.97■■■■□ 3.19
HOMER3-202ENST00000392351 PLEKHG5O94827 1062 aa34.96■■■■□ 3.19
HOMER3-202ENST00000392351 MED1Q15648 1581 aaPredicted RBP34.96■■■■□ 3.19
HOMER3-202ENST00000392351 CRYBG1Q9Y4K1 1723 aa34.96■■■■□ 3.19
HOMER3-202ENST00000392351 NME9Q86XW9 330 aa34.95■■■■□ 3.18
HOMER3-202ENST00000392351 MARF1Q9Y4F3 1742 aaKnown RBP34.94■■■■□ 3.18
HOMER3-202ENST00000392351 SPATA31A6Q5VVP1 1343 aa34.93■■■■□ 3.18
HOMER3-202ENST00000392351 NLRP6P59044 892 aa34.92■■■■□ 3.18
HOMER3-202ENST00000392351 PHRF1Q9P1Y6 1649 aaKnown RBP34.92■■■■□ 3.18
HOMER3-202ENST00000392351 USP54Q70EL1 1684 aa34.91■■■■□ 3.18
HOMER3-202ENST00000392351 NLRP13Q86W25 1043 aa34.91■■■■□ 3.18
HOMER3-202ENST00000392351 CABLES1Q8TDN4 633 aa34.91■■■■□ 3.18
HOMER3-202ENST00000392351 NUTM2BA6NNL0 878 aaPredicted RBP34.88■■■■□ 3.17
HOMER3-202ENST00000392351 NUTM2EB1AL46 878 aaPredicted RBP34.88■■■■□ 3.17
HOMER3-202ENST00000392351 NUTM2AQ8IVF1 878 aaPredicted RBP34.88■■■■□ 3.17
HOMER3-202ENST00000392351 ZRANB1Q9UGI0 708 aa34.88■■■■□ 3.17
HOMER3-202ENST00000392351 CGNL1Q0VF96 1302 aa34.87■■■■□ 3.17
HOMER3-202ENST00000392351 USP31Q70CQ4 1352 aa34.87■■■■□ 3.17
HOMER3-202ENST00000392351 KNSTRNQ9Y448 316 aa34.87■■■■□ 3.17
HOMER3-202ENST00000392351 USP19O94966 1318 aa34.86■■■■□ 3.17
HOMER3-202ENST00000392351 FYB1O15117 783 aa34.86■■■■□ 3.17
HOMER3-202ENST00000392351 HAP1P54257 671 aaPredicted RBP34.86■■■■□ 3.17
HOMER3-202ENST00000392351 LRP6O75581 1613 aa34.86■■■■□ 3.17
HOMER3-202ENST00000392351 OVOS2A0A0J9YW53 1432 aa34.84■■■■□ 3.17
HOMER3-202ENST00000392351 OVOS2Q6IE36 1432 aa34.84■■■■□ 3.17
HOMER3-202ENST00000392351 GGNBP2Q9H3C7 697 aa34.83■■■■□ 3.17
HOMER3-202ENST00000392351 SLIT3O75094 1523 aa34.83■■■■□ 3.17
HOMER3-202ENST00000392351 DDX10Q13206 875 aaKnown RBP34.83■■■■□ 3.17
HOMER3-202ENST00000392351 ANKRD26Q9UPS8 1709 aa34.82■■■■□ 3.17
HOMER3-202ENST00000392351 PER1O15534 1290 aaPredicted RBP34.82■■■■□ 3.16
HOMER3-202ENST00000392351 COG3Q96JB2 828 aa34.8■■■■□ 3.16
HOMER3-202ENST00000392351 ADAMTS2O95450 1211 aa34.78■■■■□ 3.16
HOMER3-202ENST00000392351 GCP02774 474 aa34.77■■■■□ 3.16
HOMER3-202ENST00000392351 SOX12O15370 315 aa34.75■■■■□ 3.15
HOMER3-202ENST00000392351 AMER1Q5JTC6 1135 aaPredicted RBP34.75■■■■□ 3.15
HOMER3-202ENST00000392351 NSD2O96028 1365 aa34.75■■■■□ 3.15
HOMER3-202ENST00000392351 NFAT5O94916 1531 aa34.73■■■■□ 3.15
HOMER3-202ENST00000392351 MEX3CQ5U5Q3 659 aaKnown RBP34.73■■■■□ 3.15
HOMER3-202ENST00000392351 KCNH5Q8NCM2 988 aa34.73■■■■□ 3.15
HOMER3-202ENST00000392351 ZC3H6P61129 1189 aaKnown RBP34.7■■■■□ 3.15
HOMER3-202ENST00000392351 LTN1O94822 1766 aa34.69■■■■□ 3.14
HOMER3-202ENST00000392351 KIAA0232Q92628 1395 aa34.69■■■■□ 3.14
HOMER3-202ENST00000392351 CC2D1BQ5T0F9 858 aaKnown RBP34.67■■■■□ 3.14
HOMER3-202ENST00000392351 NPC1L1Q9UHC9 1359 aa34.67■■■■□ 3.14
HOMER3-202ENST00000392351 CNGB1Q14028 1251 aaPredicted RBP34.66■■■■□ 3.14
HOMER3-202ENST00000392351 C8orf37Q96NL8 207 aa34.66■■■■□ 3.14
HOMER3-202ENST00000392351 CPDO75976 1380 aa34.66■■■■□ 3.14
HOMER3-202ENST00000392351 PRDM11Q9NQV5 511 aa34.66■■■■□ 3.14
HOMER3-202ENST00000392351 COL14A1Q05707 1796 aaKnown RBP34.65■■■■□ 3.14
HOMER3-202ENST00000392351 PLCH1Q4KWH8 1693 aa34.65■■■■□ 3.14
HOMER3-202ENST00000392351 ZBTB7CA1YPR0 619 aa34.63■■■■□ 3.13
HOMER3-202ENST00000392351 MORC1Q86VD1 984 aa34.63■■■■□ 3.13
HOMER3-202ENST00000392351 FBLN1P23142 703 aa34.62■■■■□ 3.13
HOMER3-202ENST00000392351 FAM83GA6ND36 823 aa34.62■■■■□ 3.13
HOMER3-202ENST00000392351 MAP2P11137 1827 aaKnown RBP34.61■■■■□ 3.13
HOMER3-202ENST00000392351 CHRNA2Q15822 529 aa34.61■■■■□ 3.13
HOMER3-202ENST00000392351 NGLY1Q96IV0 654 aa34.61■■■■□ 3.13
HOMER3-202ENST00000392351 TNNT2P45379 298 aaPredicted RBP34.6■■■■□ 3.13
HOMER3-202ENST00000392351 ARHGEF25Q86VW2 580 aa34.6■■■■□ 3.13
HOMER3-202ENST00000392351 COL18A1P39060 1754 aa34.58■■■■□ 3.13
HOMER3-202ENST00000392351 NWD2Q9ULI1 1742 aa34.57■■■■□ 3.12
HOMER3-202ENST00000392351 LMO7Q8WWI1 1683 aa34.57■■■■□ 3.12
HOMER3-202ENST00000392351 RRS1Q15050 365 aaKnown RBP34.56■■■■□ 3.12
HOMER3-202ENST00000392351 RGPD5Q99666 1765 aa34.56■■■■□ 3.12
HOMER3-202ENST00000392351 MAP3K19Q56UN5 1328 aa34.55■■■■□ 3.12
HOMER3-202ENST00000392351 AATKQ6ZMQ8 1374 aa34.54■■■■□ 3.12
HOMER3-202ENST00000392351 SLIT2O94813 1529 aa34.54■■■■□ 3.12
HOMER3-202ENST00000392351 AFF2P51816 1311 aa34.54■■■■□ 3.12
HOMER3-202ENST00000392351 ABCC6O95255 1503 aa34.52■■■■□ 3.12
HOMER3-202ENST00000392351 NRAPQ86VF7 1730 aa34.51■■■■□ 3.12
HOMER3-202ENST00000392351 FNBP4Q8N3X1 1017 aaPredicted RBP34.51■■■■□ 3.12
HOMER3-202ENST00000392351 BTG4Q9NY30 223 aa34.51■■■■□ 3.12
HOMER3-202ENST00000392351 CAMTA1Q9Y6Y1 1673 aa34.51■■■■□ 3.11
HOMER3-202ENST00000392351 PEAK1Q9H792 1746 aa34.51■■■■□ 3.11
HOMER3-202ENST00000392351 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.49■■■■□ 3.11
HOMER3-202ENST00000392351 PHF23Q9BUL5 403 aaPredicted RBP34.49■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms