RNA–Protein interactions for RNA: ENST00000392347.5

CCDC57-206, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC57, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-206ENST00000392347 PRPF40AO75400 957 aaKnown RBP16.68■□□□□ 0.26
CCDC57-206ENST00000392347 ARHGAP5Q13017 1502 aa16.68■□□□□ 0.26
CCDC57-206ENST00000392347 PTMSP20962 102 aa16.68■□□□□ 0.26
CCDC57-206ENST00000392347 ZBTB40Q9NUA8 1239 aa16.68■□□□□ 0.26
CCDC57-206ENST00000392347 U2SURPO15042 1029 aaKnown RBP16.67■□□□□ 0.26
CCDC57-206ENST00000392347 MAP7D2Q96T17 732 aa16.66■□□□□ 0.26
CCDC57-206ENST00000392347 MAST1Q9Y2H9 1570 aa16.66■□□□□ 0.26
CCDC57-206ENST00000392347 TTC37Q6PGP7 1564 aa16.66■□□□□ 0.26
CCDC57-206ENST00000392347 SYCP2Q9BX26 1530 aa16.66■□□□□ 0.26
CCDC57-206ENST00000392347 NSD3Q9BZ95 1437 aa16.65■□□□□ 0.26
CCDC57-206ENST00000392347 RSPH4AQ5TD94 716 aa16.65■□□□□ 0.26
CCDC57-206ENST00000392347 ZNF500O60304 480 aaPredicted RBP16.65■□□□□ 0.26
CCDC57-206ENST00000392347 LMBRD1Q9NUN5 540 aa16.65■□□□□ 0.26
CCDC57-206ENST00000392347 ZNF445P59923 1031 aa16.64■□□□□ 0.26
CCDC57-206ENST00000392347 MYOM1P52179 1685 aa16.64■□□□□ 0.25
CCDC57-206ENST00000392347 TERF1P54274 439 aa16.64■□□□□ 0.25
CCDC57-206ENST00000392347 ZKSCAN5Q9Y2L8 839 aa16.64■□□□□ 0.25
CCDC57-206ENST00000392347 SYCE3A1L190 88 aa16.64■□□□□ 0.25
CCDC57-206ENST00000392347 FAM177BA6PVY3 158 aa16.64■□□□□ 0.25
CCDC57-206ENST00000392347 BMP2KLQ5H9B9 411 aa16.64■□□□□ 0.25
CCDC57-206ENST00000392347 CFAP53Q96M91 514 aa16.64■□□□□ 0.25
CCDC57-206ENST00000392347 UNC13BO14795 1591 aa16.63■□□□□ 0.25
CCDC57-206ENST00000392347 RNF17Q9BXT8 1623 aaKnown RBP16.63■□□□□ 0.25
CCDC57-206ENST00000392347 DNTTIP2Q5QJE6 756 aaKnown RBP16.63■□□□□ 0.25
CCDC57-206ENST00000392347 NSFL1CQ9UNZ2 370 aaKnown RBP16.63■□□□□ 0.25
CCDC57-206ENST00000392347 TRAK1Q9UPV9 953 aa16.63■□□□□ 0.25
CCDC57-206ENST00000392347 GPT2Q8TD30 523 aa16.62■□□□□ 0.25
CCDC57-206ENST00000392347 ERVK-7P63135 1459 aa16.62■□□□□ 0.25
CCDC57-206ENST00000392347 ADGRF5Q8IZF2 1346 aa16.62■□□□□ 0.25
CCDC57-206ENST00000392347 ZGPATQ8N5A5 531 aaKnown RBP16.62■□□□□ 0.25
CCDC57-206ENST00000392347 CCDC27Q2M243 656 aa16.62■□□□□ 0.25
CCDC57-206ENST00000392347 PDLIM2Q96JY6 352 aa16.62■□□□□ 0.25
CCDC57-206ENST00000392347 KIF16BQ96L93 1317 aa16.61■□□□□ 0.25
CCDC57-206ENST00000392347 DYNC1I1O14576 645 aa16.61■□□□□ 0.25
CCDC57-206ENST00000392347 PTMAP06454 111 aaKnown RBP16.61■□□□□ 0.25
CCDC57-206ENST00000392347 IQGAP1P46940 1657 aa16.61■□□□□ 0.25
CCDC57-206ENST00000392347 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.6■□□□□ 0.256e-6■■■□□ 19.1
CCDC57-206ENST00000392347 TPRNQ4KMQ1 711 aa16.6■□□□□ 0.25
CCDC57-206ENST00000392347 SMAP1Q8IYB5 467 aaPredicted RBP16.6■□□□□ 0.25
CCDC57-206ENST00000392347 TMEM63CQ9P1W3 806 aa16.6■□□□□ 0.25
CCDC57-206ENST00000392347 MADDQ8WXG6 1647 aa16.6■□□□□ 0.25
CCDC57-206ENST00000392347 HS1BP3Q53T59 392 aa16.59■□□□□ 0.25
CCDC57-206ENST00000392347 IQSEC2Q5JU85 1478 aa16.59■□□□□ 0.25
CCDC57-206ENST00000392347 ZNF830Q96NB3 372 aaPredicted RBP16.59■□□□□ 0.25
CCDC57-206ENST00000392347 IBTKQ9P2D0 1353 aaPredicted RBP16.59■□□□□ 0.25
CCDC57-206ENST00000392347 CBX1P83916 185 aa16.59■□□□□ 0.25
CCDC57-206ENST00000392347 FOXD4L6Q3SYB3 417 aaPredicted RBP16.59■□□□□ 0.25
CCDC57-206ENST00000392347 SASS6Q6UVJ0 657 aa16.59■□□□□ 0.25
CCDC57-206ENST00000392347 FOXD4L3Q6VB84 417 aaPredicted RBP16.59■□□□□ 0.25
CCDC57-206ENST00000392347 SCAPERQ9BY12 1400 aa16.58■□□□□ 0.25
CCDC57-206ENST00000392347 TRIM35Q9UPQ4 493 aa16.58■□□□□ 0.24
CCDC57-206ENST00000392347 ELL2O00472 640 aaPredicted RBP16.58■□□□□ 0.24
CCDC57-206ENST00000392347 CLEC17AQ6ZS10 378 aa16.58■□□□□ 0.24
CCDC57-206ENST00000392347 TMPOP42166 694 aaKnown RBP16.57■□□□□ 0.24
CCDC57-206ENST00000392347 CSPP1Q1MSJ5 1256 aa16.57■□□□□ 0.24
CCDC57-206ENST00000392347 KDM5AP29375 1690 aaKnown RBP16.57■□□□□ 0.24
CCDC57-206ENST00000392347 CHGAP10645 457 aaKnown RBP16.57■□□□□ 0.24
CCDC57-206ENST00000392347 NUCB2P80303 420 aa16.57■□□□□ 0.24
CCDC57-206ENST00000392347 TRAPPC8Q9Y2L5 1435 aa16.56■□□□□ 0.24
CCDC57-206ENST00000392347 IPO8O15397 1037 aaKnown RBP16.56■□□□□ 0.24
CCDC57-206ENST00000392347 C17orf53Q8N3J3 647 aaPredicted RBP16.56■□□□□ 0.24
CCDC57-206ENST00000392347 IQGAP3Q86VI3 1631 aa16.56■□□□□ 0.24
CCDC57-206ENST00000392347 ATP10AO60312 1499 aa16.55■□□□□ 0.24
CCDC57-206ENST00000392347 TMEM132EQ6IEE7 984 aa16.55■□□□□ 0.24
CCDC57-206ENST00000392347 CCDC39Q9UFE4 941 aa16.55■□□□□ 0.24
CCDC57-206ENST00000392347 KANK1Q14678 1352 aa16.55■□□□□ 0.24
CCDC57-206ENST00000392347 APBB1O00213 710 aa16.55■□□□□ 0.24
CCDC57-206ENST00000392347 C16orf71Q8IYS4 520 aaPredicted RBP16.55■□□□□ 0.24
CCDC57-206ENST00000392347 CDC45O75419 566 aa16.54■□□□□ 0.24
CCDC57-206ENST00000392347 GSPT1P15170 499 aaKnown RBP16.54■□□□□ 0.24
CCDC57-206ENST00000392347 EFCAB2Q5VUJ9 269 aa16.54■□□□□ 0.24
CCDC57-206ENST00000392347 ZDHHC9Q9Y397 364 aa16.54■□□□□ 0.24
CCDC57-206ENST00000392347 SHPRHQ149N8 1683 aa16.54■□□□□ 0.24
CCDC57-206ENST00000392347 CEP152O94986 1710 aa16.54■□□□□ 0.24
CCDC57-206ENST00000392347 LRSAM1Q6UWE0 723 aa16.54■□□□□ 0.24
CCDC57-206ENST00000392347 CCDC94Q9BW85 323 aaPredicted RBP16.54■□□□□ 0.24
CCDC57-206ENST00000392347 IGSF3O75054 1194 aa16.54■□□□□ 0.24
CCDC57-206ENST00000392347 SIRT2Q8IXJ6 389 aa16.54■□□□□ 0.24
CCDC57-206ENST00000392347 ZSCAN20P17040 1043 aaPredicted RBP16.53■□□□□ 0.24
CCDC57-206ENST00000392347 MTERF4Q7Z6M4 381 aaKnown RBP16.53■□□□□ 0.24
CCDC57-206ENST00000392347 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.53■□□□□ 0.24
CCDC57-206ENST00000392347 PPIP5K1Q6PFW1 1433 aa16.53■□□□□ 0.24
CCDC57-206ENST00000392347 CYP2E1P05181 493 aaPredicted RBP16.53■□□□□ 0.24
CCDC57-206ENST00000392347 ZBTB7BO15156 539 aaPredicted RBP16.52■□□□□ 0.24
CCDC57-206ENST00000392347 CT47B1P0C2W7 299 aaPredicted RBP16.52■□□□□ 0.24
CCDC57-206ENST00000392347 RABEP1Q15276 862 aa16.52■□□□□ 0.24
CCDC57-206ENST00000392347 SAFB2Q14151 953 aaKnown RBP eCLIP16.52■□□□□ 0.234e-7■■□□□ 12.2
CCDC57-206ENST00000392347 ATAD2Q6PL18 1390 aa16.51■□□□□ 0.23
CCDC57-206ENST00000392347 ZNF518AQ6AHZ1 1483 aa16.51■□□□□ 0.23
CCDC57-206ENST00000392347 PTPRTO14522 1441 aa16.51■□□□□ 0.23
CCDC57-206ENST00000392347 DMTNQ08495 405 aa16.51■□□□□ 0.23
CCDC57-206ENST00000392347 NOL8Q76FK4 1167 aaKnown RBP16.51■□□□□ 0.23
CCDC57-206ENST00000392347 SPDYE4A6NLX3 237 aa16.51■□□□□ 0.23
CCDC57-206ENST00000392347 KIAA2012Q0VF49 1180 aa16.51■□□□□ 0.23
CCDC57-206ENST00000392347 SPAG9O60271 1321 aaKnown RBP16.5■□□□□ 0.23
CCDC57-206ENST00000392347 CD109Q6YHK3 1445 aa16.5■□□□□ 0.23
CCDC57-206ENST00000392347 KIF3BO15066 747 aa16.5■□□□□ 0.23
CCDC57-206ENST00000392347 FGD1P98174 961 aa16.5■□□□□ 0.23
CCDC57-206ENST00000392347 ZNF710Q8N1W2 664 aa16.5■□□□□ 0.23
CCDC57-206ENST00000392347 GCC1Q96CN9 775 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms