RNA–Protein interactions for RNA: ENST00000392114.6

VIL1-202, Transcript of villin 1, humanhuman

TSL 2 BASIC

Gene VIL1, Length 1,968 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-202ENST00000392114 TTC21BQ7Z4L5 1316 aa16.11■□□□□ 0.17
VIL1-202ENST00000392114 PMFBP1Q8TBY8 1022 aa16.1■□□□□ 0.17
VIL1-202ENST00000392114 PHF8Q9UPP1 1060 aa16.1■□□□□ 0.17
VIL1-202ENST00000392114 NUDCQ9Y266 331 aa16.09■□□□□ 0.17
VIL1-202ENST00000392114 NRKQ7Z2Y5 1582 aa16.09■□□□□ 0.17
VIL1-202ENST00000392114 ATF3P18847 181 aa16.09■□□□□ 0.17
VIL1-202ENST00000392114 ADAMTS8Q9UP79 889 aa16.09■□□□□ 0.17
VIL1-202ENST00000392114 DCCP43146 1447 aa16.09■□□□□ 0.17
VIL1-202ENST00000392114 AATKQ6ZMQ8 1374 aa16.08■□□□□ 0.16
VIL1-202ENST00000392114 MAP2P11137 1827 aaKnown RBP16.08■□□□□ 0.16
VIL1-202ENST00000392114 BLMP54132 1417 aaPredicted RBP16.08■□□□□ 0.16
VIL1-202ENST00000392114 NME9Q86XW9 330 aa16.07■□□□□ 0.16
VIL1-202ENST00000392114 ESCO1Q5FWF5 840 aa16.07■□□□□ 0.16
VIL1-202ENST00000392114 NGEFQ8N5V2 710 aa16.07■□□□□ 0.16
VIL1-202ENST00000392114 RBM33Q96EV2 1170 aaKnown RBP16.07■□□□□ 0.16
VIL1-202ENST00000392114 SSH2Q76I76 1423 aa16.06■□□□□ 0.16
VIL1-202ENST00000392114 CADPS2Q86UW7 1296 aa16.06■□□□□ 0.16
VIL1-202ENST00000392114 TMEM94Q12767 1356 aa16.06■□□□□ 0.16
VIL1-202ENST00000392114 STRCP1A6NGW2 1772 aa16.06■□□□□ 0.16
VIL1-202ENST00000392114 MSH6P52701 1360 aa16.05■□□□□ 0.16
VIL1-202ENST00000392114 PSME1Q06323 249 aa16.04■□□□□ 0.16
VIL1-202ENST00000392114 PNNQ9H307 717 aaKnown RBP16.04■□□□□ 0.16
VIL1-202ENST00000392114 PDE3BQ13370 1112 aa16.04■□□□□ 0.16
VIL1-202ENST00000392114 KIF1AQ12756 1690 aa16.03■□□□□ 0.16
VIL1-202ENST00000392114 USP31Q70CQ4 1352 aa16.03■□□□□ 0.16
VIL1-202ENST00000392114 PNPLA6Q8IY17 1366 aa16.03■□□□□ 0.16
VIL1-202ENST00000392114 POLKQ9UBT6 870 aa16.02■□□□□ 0.16
VIL1-202ENST00000392114 DIAPH1O60610 1272 aaKnown RBP16.02■□□□□ 0.15
VIL1-202ENST00000392114 OVOS2A0A0J9YW53 1432 aa16.01■□□□□ 0.15
VIL1-202ENST00000392114 OVOS2Q6IE36 1432 aa16.01■□□□□ 0.15
VIL1-202ENST00000392114 SHPRHQ149N8 1683 aa16.01■□□□□ 0.15
VIL1-202ENST00000392114 C1orf167Q5SNV9 1468 aa16■□□□□ 0.15
VIL1-202ENST00000392114 SMG6Q86US8 1419 aaKnown RBP16■□□□□ 0.15
VIL1-202ENST00000392114 PAK3O75914 559 aaPredicted RBP16■□□□□ 0.15
VIL1-202ENST00000392114 ABTB2Q8N961 1025 aa16■□□□□ 0.15
VIL1-202ENST00000392114 PPM1GO15355 546 aaPredicted RBP15.99■□□□□ 0.15
VIL1-202ENST00000392114 NLRP6P59044 892 aa15.99■□□□□ 0.15
VIL1-202ENST00000392114 CDK12Q9NYV4 1490 aaPredicted RBP15.99■□□□□ 0.15
VIL1-202ENST00000392114 USP54Q70EL1 1684 aa15.99■□□□□ 0.15
VIL1-202ENST00000392114 U2AF1L5P0DN76 240 aaPredicted RBP15.98■□□□□ 0.15
VIL1-202ENST00000392114 U2AF1Q01081 240 aaKnown RBP eCLIP15.98■□□□□ 0.15
VIL1-202ENST00000392114 RUNDC1Q96C34 613 aa15.98■□□□□ 0.15
VIL1-202ENST00000392114 ZRANB1Q9UGI0 708 aa15.98■□□□□ 0.15
VIL1-202ENST00000392114 LRRC7Q96NW7 1537 aa15.98■□□□□ 0.15
VIL1-202ENST00000392114 NCBP3Q53F19 620 aaKnown RBP15.97■□□□□ 0.15
VIL1-202ENST00000392114 ORAI2Q96SN7 254 aa15.97■□□□□ 0.15
VIL1-202ENST00000392114 MST1RQ04912 1400 aa15.97■□□□□ 0.15
VIL1-202ENST00000392114 XIRP1Q702N8 1843 aaKnown RBP15.97■□□□□ 0.15
VIL1-202ENST00000392114 PIK3C2AO00443 1686 aa15.97■□□□□ 0.15
VIL1-202ENST00000392114 COL3A1P02461 1466 aaPredicted RBP15.97■□□□□ 0.15
VIL1-202ENST00000392114 ZNF335Q9H4Z2 1342 aaPredicted RBP15.97■□□□□ 0.15
VIL1-202ENST00000392114 NEFMP07197 916 aa15.96■□□□□ 0.15
VIL1-202ENST00000392114 U2SURPO15042 1029 aaKnown RBP15.96■□□□□ 0.15
VIL1-202ENST00000392114 KIF24Q5T7B8 1368 aa15.95■□□□□ 0.14
VIL1-202ENST00000392114 FOXO3O43524 673 aa15.95■□□□□ 0.14
VIL1-202ENST00000392114 KCNH5Q8NCM2 988 aa15.95■□□□□ 0.14
VIL1-202ENST00000392114 EMILIN1Q9Y6C2 1016 aa15.95■□□□□ 0.14
VIL1-202ENST00000392114 FCHSD2O94868 740 aa15.94■□□□□ 0.14
VIL1-202ENST00000392114 KRT28Q7Z3Y7 464 aa15.94■□□□□ 0.14
VIL1-202ENST00000392114 GTF3C3Q9Y5Q9 886 aa15.94■□□□□ 0.14
VIL1-202ENST00000392114 NPHP3Q7Z494 1330 aa15.93■□□□□ 0.14
VIL1-202ENST00000392114 APAF1O14727 1248 aa15.93■□□□□ 0.14
VIL1-202ENST00000392114 CCDC146Q8IYE0 955 aa15.93■□□□□ 0.14
VIL1-202ENST00000392114 SALL2Q9Y467 1007 aaPredicted RBP15.93■□□□□ 0.14
VIL1-202ENST00000392114 RRS1Q15050 365 aaKnown RBP15.93■□□□□ 0.14
VIL1-202ENST00000392114 MAPK8IP3Q9UPT6 1336 aa15.92■□□□□ 0.14
VIL1-202ENST00000392114 NEFLP07196 543 aa15.91■□□□□ 0.14
VIL1-202ENST00000392114 FBLN1P23142 703 aa15.91■□□□□ 0.14
VIL1-202ENST00000392114 SBNO1A3KN83 1393 aa15.91■□□□□ 0.14
VIL1-202ENST00000392114 IL13P35225 146 aa15.91■□□□□ 0.14
VIL1-202ENST00000392114 AMPHP49418 695 aa15.91■□□□□ 0.14
VIL1-202ENST00000392114 FLT4P35916 1363 aa15.91■□□□□ 0.14
VIL1-202ENST00000392114 GOLGA2Q08379 1002 aa15.9■□□□□ 0.14
VIL1-202ENST00000392114 TCP11L2Q8N4U5 519 aa15.89■□□□□ 0.13
VIL1-202ENST00000392114 SLAIN2Q9P270 581 aa15.89■□□□□ 0.13
VIL1-202ENST00000392114 CCDC27Q2M243 656 aa15.89■□□□□ 0.13
VIL1-202ENST00000392114 TRPM3Q9HCF6 1732 aaPredicted RBP15.88■□□□□ 0.13
VIL1-202ENST00000392114 MAP3K19Q56UN5 1328 aa15.88■□□□□ 0.13
VIL1-202ENST00000392114 MARF1Q9Y4F3 1742 aaKnown RBP15.88■□□□□ 0.13
VIL1-202ENST00000392114 SOX12O15370 315 aa15.87■□□□□ 0.13
VIL1-202ENST00000392114 NUTM2GQ5VZR2 741 aa15.87■□□□□ 0.13
VIL1-202ENST00000392114 ZNF521Q96K83 1311 aa15.87■□□□□ 0.13
VIL1-202ENST00000392114 RTL1A6NKG5 1358 aa15.87■□□□□ 0.13
VIL1-202ENST00000392114 SENP3-EIF4A1A0A087X0R7 540 aa15.86■□□□□ 0.13
VIL1-202ENST00000392114 LMOD2Q6P5Q4 547 aa15.86■□□□□ 0.13
VIL1-202ENST00000392114 PLEKHF1Q96S99 279 aa15.86■□□□□ 0.13
VIL1-202ENST00000392114 EIF4A2Q14240 407 aaKnown RBP15.85■□□□□ 0.13
VIL1-202ENST00000392114 WDR63Q8IWG1 891 aa15.85■□□□□ 0.13
VIL1-202ENST00000392114 IQSEC2Q5JU85 1478 aa15.85■□□□□ 0.13
VIL1-202ENST00000392114 ALS2Q96Q42 1657 aa15.84■□□□□ 0.13
VIL1-202ENST00000392114 E9PSI1 815 aa15.84■□□□□ 0.13
VIL1-202ENST00000392114 XPCQ01831 940 aaPredicted RBP15.84■□□□□ 0.13
VIL1-202ENST00000392114 HSP90AB2PQ58FF8 381 aa15.84■□□□□ 0.13
VIL1-202ENST00000392114 WWC1Q8IX03 1113 aa15.84■□□□□ 0.13
VIL1-202ENST00000392114 RSPH6AQ9H0K4 717 aa15.84■□□□□ 0.13
VIL1-202ENST00000392114 SUPT16HQ9Y5B9 1047 aaKnown RBP15.84■□□□□ 0.13
VIL1-202ENST00000392114 LTN1O94822 1766 aa15.84■□□□□ 0.13
VIL1-202ENST00000392114 ARHGEF10O15013 1369 aa15.84■□□□□ 0.13
VIL1-202ENST00000392114 PEAK1Q9H792 1746 aa15.84■□□□□ 0.13
VIL1-202ENST00000392114 BRINP3Q76B58 766 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms