RNA–Protein interactions for RNA: ENST00000391942.6

ERCC2-202, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-202ENST00000391942 TTC21BQ7Z4L5 1316 aa23.32■■□□□ 1.32
ERCC2-202ENST00000391942 NHSL1Q5SYE7 1610 aa23.31■■□□□ 1.32
ERCC2-202ENST00000391942 CC2D1BQ5T0F9 858 aaKnown RBP23.3■■□□□ 1.32
ERCC2-202ENST00000391942 SSH2Q76I76 1423 aa23.3■■□□□ 1.32
ERCC2-202ENST00000391942 CGNL1Q0VF96 1302 aa23.3■■□□□ 1.32
ERCC2-202ENST00000391942 PXDNQ92626 1479 aa23.3■■□□□ 1.32
ERCC2-202ENST00000391942 TRPM3Q9HCF6 1732 aaPredicted RBP23.29■■□□□ 1.32
ERCC2-202ENST00000391942 KIF20BQ96Q89 1820 aa23.29■■□□□ 1.32
ERCC2-202ENST00000391942 AMER1Q5JTC6 1135 aaPredicted RBP23.29■■□□□ 1.32
ERCC2-202ENST00000391942 NME9Q86XW9 330 aa23.29■■□□□ 1.32
ERCC2-202ENST00000391942 GGNBP2Q9H3C7 697 aa23.27■■□□□ 1.32
ERCC2-202ENST00000391942 ZRANB1Q9UGI0 708 aa23.27■■□□□ 1.32
ERCC2-202ENST00000391942 FYB1O15117 783 aa23.26■■□□□ 1.31
ERCC2-202ENST00000391942 NUTM2GQ5VZR2 741 aa23.26■■□□□ 1.31
ERCC2-202ENST00000391942 LMOD2Q6P5Q4 547 aa23.26■■□□□ 1.31
ERCC2-202ENST00000391942 TTC21AQ8NDW8 1320 aa23.26■■□□□ 1.31
ERCC2-202ENST00000391942 PIK3C2AO00443 1686 aa23.25■■□□□ 1.31
ERCC2-202ENST00000391942 AHDC1Q5TGY3 1603 aaPredicted RBP23.25■■□□□ 1.31
ERCC2-202ENST00000391942 BRD4O60885 1362 aaPredicted RBP23.24■■□□□ 1.31
ERCC2-202ENST00000391942 ABTB2Q8N961 1025 aa23.24■■□□□ 1.31
ERCC2-202ENST00000391942 SOS2Q07890 1332 aaPredicted RBP23.24■■□□□ 1.31
ERCC2-202ENST00000391942 PHLPP1O60346 1717 aa23.24■■□□□ 1.31
ERCC2-202ENST00000391942 PLEKHG5O94827 1062 aa23.23■■□□□ 1.31
ERCC2-202ENST00000391942 SBNO1A3KN83 1393 aa23.22■■□□□ 1.31
ERCC2-202ENST00000391942 ALS2Q96Q42 1657 aa23.21■■□□□ 1.31
ERCC2-202ENST00000391942 TNS3Q68CZ2 1445 aa23.21■■□□□ 1.31
ERCC2-202ENST00000391942 ANP32CO43423 234 aa23.21■■□□□ 1.31
ERCC2-202ENST00000391942 ANKRD26Q9UPS8 1709 aa23.21■■□□□ 1.31
ERCC2-202ENST00000391942 NSD2O96028 1365 aa23.2■■□□□ 1.31
ERCC2-202ENST00000391942 NPC1L1Q9UHC9 1359 aa23.2■■□□□ 1.31
ERCC2-202ENST00000391942 NLRP6P59044 892 aa23.2■■□□□ 1.3
ERCC2-202ENST00000391942 SPATA31A3Q5VYP0 1347 aa23.2■■□□□ 1.3
ERCC2-202ENST00000391942 MORC1Q86VD1 984 aa23.19■■□□□ 1.3
ERCC2-202ENST00000391942 COG3Q96JB2 828 aa23.19■■□□□ 1.3
ERCC2-202ENST00000391942 TNNT2P45379 298 aaPredicted RBP23.18■■□□□ 1.3
ERCC2-202ENST00000391942 COL16A1Q07092 1604 aaPredicted RBP23.18■■□□□ 1.3
ERCC2-202ENST00000391942 MARF1Q9Y4F3 1742 aaKnown RBP23.17■■□□□ 1.3
ERCC2-202ENST00000391942 PRKRIP1Q9H875 184 aaPredicted RBP23.17■■□□□ 1.3
ERCC2-202ENST00000391942 OVOS2A0A0J9YW53 1432 aa23.16■■□□□ 1.3
ERCC2-202ENST00000391942 OVOS2Q6IE36 1432 aa23.16■■□□□ 1.3
ERCC2-202ENST00000391942 USP31Q70CQ4 1352 aa23.16■■□□□ 1.3
ERCC2-202ENST00000391942 SOX12O15370 315 aa23.15■■□□□ 1.3
ERCC2-202ENST00000391942 PARD3Q8TEW0 1356 aa23.15■■□□□ 1.3
ERCC2-202ENST00000391942 ARHGEF10O15013 1369 aa23.14■■□□□ 1.29
ERCC2-202ENST00000391942 NLRP13Q86W25 1043 aa23.14■■□□□ 1.29
ERCC2-202ENST00000391942 LRRC59Q96AG4 307 aaKnown RBP23.14■■□□□ 1.29
ERCC2-202ENST00000391942 USP54Q70EL1 1684 aa23.13■■□□□ 1.29
ERCC2-202ENST00000391942 FBLN1P23142 703 aa23.12■■□□□ 1.29
ERCC2-202ENST00000391942 RALBP1Q15311 655 aa23.12■■□□□ 1.29
ERCC2-202ENST00000391942 MIER1Q8N108 512 aa23.11■■□□□ 1.29
ERCC2-202ENST00000391942 CABLES1Q8TDN4 633 aa23.11■■□□□ 1.29
ERCC2-202ENST00000391942 MED1Q15648 1581 aaPredicted RBP23.11■■□□□ 1.29
ERCC2-202ENST00000391942 HSPA1LP34931 641 aa23.11■■□□□ 1.29
ERCC2-202ENST00000391942 USP19O94966 1318 aa23.08■■□□□ 1.29
ERCC2-202ENST00000391942 PNPLA6Q8IY17 1366 aa23.08■■□□□ 1.28
ERCC2-202ENST00000391942 PHRF1Q9P1Y6 1649 aaKnown RBP23.07■■□□□ 1.28
ERCC2-202ENST00000391942 PPP2R1AP30153 589 aa23.07■■□□□ 1.28
ERCC2-202ENST00000391942 CRYBG1Q9Y4K1 1723 aa23.07■■□□□ 1.28
ERCC2-202ENST00000391942 SLIT3O75094 1523 aa23.07■■□□□ 1.28
ERCC2-202ENST00000391942 MYBBP1AQ9BQG0 1328 aaKnown RBP23.07■■□□□ 1.28
ERCC2-202ENST00000391942 RRS1Q15050 365 aaKnown RBP23.05■■□□□ 1.28
ERCC2-202ENST00000391942 ABCA3Q99758 1704 aa23.05■■□□□ 1.28
ERCC2-202ENST00000391942 GCP02774 474 aa23.05■■□□□ 1.28
ERCC2-202ENST00000391942 HAP1P54257 671 aaPredicted RBP23.05■■□□□ 1.28
ERCC2-202ENST00000391942 MAP2P11137 1827 aaKnown RBP23.04■■□□□ 1.28
ERCC2-202ENST00000391942 ZBTB7CA1YPR0 619 aa23.04■■□□□ 1.28
ERCC2-202ENST00000391942 COL22A1Q8NFW1 1626 aaPredicted RBP23.03■■□□□ 1.28
ERCC2-202ENST00000391942 NFAT5O94916 1531 aa23.03■■□□□ 1.28
ERCC2-202ENST00000391942 KCNH5Q8NCM2 988 aa23.03■■□□□ 1.28
ERCC2-202ENST00000391942 PPM1GO15355 546 aaPredicted RBP23.02■■□□□ 1.28
ERCC2-202ENST00000391942 FBXO41Q8TF61 875 aa23.02■■□□□ 1.28
ERCC2-202ENST00000391942 EMILIN1Q9Y6C2 1016 aa23.02■■□□□ 1.28
ERCC2-202ENST00000391942 AATKQ6ZMQ8 1374 aa23.01■■□□□ 1.27
ERCC2-202ENST00000391942 ZC3H6P61129 1189 aaKnown RBP23.01■■□□□ 1.27
ERCC2-202ENST00000391942 POLKQ9UBT6 870 aa23.01■■□□□ 1.27
ERCC2-202ENST00000391942 SHPRHQ149N8 1683 aa23.01■■□□□ 1.27
ERCC2-202ENST00000391942 JCADQ9P266 1359 aa23■■□□□ 1.27
ERCC2-202ENST00000391942 MTHFSP49914 203 aa23■■□□□ 1.27
ERCC2-202ENST00000391942 LTN1O94822 1766 aa23■■□□□ 1.27
ERCC2-202ENST00000391942 MAP3K19Q56UN5 1328 aa22.99■■□□□ 1.27
ERCC2-202ENST00000391942 NUTM2BA6NNL0 878 aaPredicted RBP22.98■■□□□ 1.27
ERCC2-202ENST00000391942 NUTM2EB1AL46 878 aaPredicted RBP22.98■■□□□ 1.27
ERCC2-202ENST00000391942 CCDC184Q52MB2 194 aa22.98■■□□□ 1.27
ERCC2-202ENST00000391942 NUTM2AQ8IVF1 878 aaPredicted RBP22.98■■□□□ 1.27
ERCC2-202ENST00000391942 PEAK1Q9H792 1746 aa22.97■■□□□ 1.27
ERCC2-202ENST00000391942 AMPHP49418 695 aa22.96■■□□□ 1.27
ERCC2-202ENST00000391942 ARHGEF25Q86VW2 580 aa22.95■■□□□ 1.26
ERCC2-202ENST00000391942 KIAA0232Q92628 1395 aa22.95■■□□□ 1.26
ERCC2-202ENST00000391942 SMG6Q86US8 1419 aaKnown RBP22.94■■□□□ 1.26
ERCC2-202ENST00000391942 CHRNA2Q15822 529 aa22.93■■□□□ 1.26
ERCC2-202ENST00000391942 MRS2Q9HD23 443 aa22.93■■□□□ 1.26
ERCC2-202ENST00000391942 ADAMTS2O95450 1211 aa22.92■■□□□ 1.26
ERCC2-202ENST00000391942 PRDM11Q9NQV5 511 aa22.92■■□□□ 1.26
ERCC2-202ENST00000391942 CDK12Q9NYV4 1490 aaPredicted RBP22.91■■□□□ 1.26
ERCC2-202ENST00000391942 CPDO75976 1380 aa22.91■■□□□ 1.26
ERCC2-202ENST00000391942 CCER2I3L3R5 266 aa22.91■■□□□ 1.26
ERCC2-202ENST00000391942 HOXC9P31274 260 aa22.91■■□□□ 1.26
ERCC2-202ENST00000391942 CFAP53Q96M91 514 aa22.91■■□□□ 1.26
ERCC2-202ENST00000391942 FLT4P35916 1363 aa22.9■■□□□ 1.26
ERCC2-202ENST00000391942 HSP90AB2PQ58FF8 381 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 1049.1 ms