RNA–Protein interactions for RNA: ENST00000390428.3

TRAV6-201, Transcript of T cell receptor alpha variable 6, humanhuman

APPRIS P1 BASIC

Gene TRAV6, Length 404 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6-201ENST00000390428 SPATA31A6Q5VVP1 1343 aa11.72□□□□□ -0.53
TRAV6-201ENST00000390428 BOLA1Q9Y3E2 137 aa11.72□□□□□ -0.53
TRAV6-201ENST00000390428 KIF1BO60333 1816 aa11.72□□□□□ -0.53
TRAV6-201ENST00000390428 LRP6O75581 1613 aa11.71□□□□□ -0.53
TRAV6-201ENST00000390428 DCCP43146 1447 aa11.71□□□□□ -0.53
TRAV6-201ENST00000390428 CLTCL1P53675 1640 aa11.71□□□□□ -0.54
TRAV6-201ENST00000390428 ZNF326Q5BKZ1 582 aaKnown RBP11.7□□□□□ -0.54
TRAV6-201ENST00000390428 BRINP3Q76B58 766 aa11.7□□□□□ -0.54
TRAV6-201ENST00000390428 FBXO22Q8NEZ5 403 aa11.7□□□□□ -0.54
TRAV6-201ENST00000390428 MFRPQ9BY79 579 aa11.7□□□□□ -0.54
TRAV6-201ENST00000390428 NEXMIFQ5QGS0 1516 aa11.7□□□□□ -0.54
TRAV6-201ENST00000390428 METP08581 1390 aa11.69□□□□□ -0.54
TRAV6-201ENST00000390428 NLRP6P59044 892 aa11.69□□□□□ -0.54
TRAV6-201ENST00000390428 C3orf67Q6ZVT6 689 aa11.69□□□□□ -0.54
TRAV6-201ENST00000390428 MEX3CQ5U5Q3 659 aaKnown RBP11.68□□□□□ -0.54
TRAV6-201ENST00000390428 TMEM121BQ9BXQ6 578 aaPredicted RBP11.68□□□□□ -0.54
TRAV6-201ENST00000390428 ASXL1Q8IXJ9 1541 aa11.68□□□□□ -0.54
TRAV6-201ENST00000390428 MST1RQ04912 1400 aa11.68□□□□□ -0.54
TRAV6-201ENST00000390428 RRBP1Q9P2E9 1410 aaKnown RBP11.68□□□□□ -0.54
TRAV6-201ENST00000390428 NHSL1Q5SYE7 1610 aa11.68□□□□□ -0.54
TRAV6-201ENST00000390428 ZNF772Q68DY9 489 aaPredicted RBP11.67□□□□□ -0.54
TRAV6-201ENST00000390428 HS6ST3Q8IZP7 471 aa11.67□□□□□ -0.54
TRAV6-201ENST00000390428 NAIPQ13075 1403 aa11.67□□□□□ -0.54
TRAV6-201ENST00000390428 NALCNQ8IZF0 1738 aa11.66□□□□□ -0.54
TRAV6-201ENST00000390428 G3V3G9 751 aa11.66□□□□□ -0.54
TRAV6-201ENST00000390428 SETD5Q9C0A6 1442 aa11.66□□□□□ -0.54
TRAV6-201ENST00000390428 ADGRL3Q9HAR2 1447 aa11.65□□□□□ -0.54
TRAV6-201ENST00000390428 LCE2DQ5TA82 110 aaPredicted RBP11.64□□□□□ -0.55
TRAV6-201ENST00000390428 NUTM2BA6NNL0 878 aaPredicted RBP11.63□□□□□ -0.55
TRAV6-201ENST00000390428 NUTM2EB1AL46 878 aaPredicted RBP11.63□□□□□ -0.55
TRAV6-201ENST00000390428 NUTM2AQ8IVF1 878 aaPredicted RBP11.63□□□□□ -0.55
TRAV6-201ENST00000390428 MICALL2Q8IY33 904 aa11.63□□□□□ -0.55
TRAV6-201ENST00000390428 LRRC59Q96AG4 307 aaKnown RBP11.63□□□□□ -0.55
TRAV6-201ENST00000390428 FAM163AQ96GL9 167 aaPredicted RBP11.63□□□□□ -0.55
TRAV6-201ENST00000390428 PPLO60437 1756 aa11.62□□□□□ -0.55
TRAV6-201ENST00000390428 TRIM52Q96A61 297 aa11.62□□□□□ -0.55
TRAV6-201ENST00000390428 HFM1A2PYH4 1435 aa11.61□□□□□ -0.55
TRAV6-201ENST00000390428 PTCH1Q13635 1447 aa11.61□□□□□ -0.55
TRAV6-201ENST00000390428 RXRBP28702 533 aa11.61□□□□□ -0.55
TRAV6-201ENST00000390428 DDX17Q92841 729 aaKnown RBP11.61□□□□□ -0.55
TRAV6-201ENST00000390428 LAMC1P11047 1609 aa11.6□□□□□ -0.55
TRAV6-201ENST00000390428 C1orf167Q5SNV9 1468 aa11.6□□□□□ -0.55
TRAV6-201ENST00000390428 PNPLA6Q8IY17 1366 aa11.6□□□□□ -0.55
TRAV6-201ENST00000390428 PRAG1Q86YV5 1406 aa11.6□□□□□ -0.55
TRAV6-201ENST00000390428 AFF2P51816 1311 aa11.6□□□□□ -0.55
TRAV6-201ENST00000390428 RPGRIP1LQ68CZ1 1315 aa11.6□□□□□ -0.55
TRAV6-201ENST00000390428 CDK12Q9NYV4 1490 aaPredicted RBP11.59□□□□□ -0.55
TRAV6-201ENST00000390428 ROBO2Q9HCK4 1378 aa11.59□□□□□ -0.55
TRAV6-201ENST00000390428 UPF1Q92900 1129 aaKnown RBP eCLIP11.59□□□□□ -0.55
TRAV6-201ENST00000390428 C8orf37Q96NL8 207 aa11.57□□□□□ -0.56
TRAV6-201ENST00000390428 ORAI2Q96SN7 254 aa11.56□□□□□ -0.56
TRAV6-201ENST00000390428 SOS2Q07890 1332 aaPredicted RBP11.56□□□□□ -0.56
TRAV6-201ENST00000390428 TMEM92Q6UXU6 159 aa11.55□□□□□ -0.56
TRAV6-201ENST00000390428 QTRT2Q9H974 415 aaKnown RBP11.55□□□□□ -0.56
TRAV6-201ENST00000390428 SNPHO15079 494 aa11.54□□□□□ -0.56
TRAV6-201ENST00000390428 RBM6P78332 1123 aaKnown RBP11.54□□□□□ -0.56
TRAV6-201ENST00000390428 NKX1-1Q15270 411 aaPredicted RBP11.54□□□□□ -0.56
TRAV6-201ENST00000390428 AMER1Q5JTC6 1135 aaPredicted RBP11.54□□□□□ -0.56
TRAV6-201ENST00000390428 IFT172Q9UG01 1749 aa11.54□□□□□ -0.56
TRAV6-201ENST00000390428 RGS12O14924 1447 aa11.53□□□□□ -0.56
TRAV6-201ENST00000390428 POTEMA6NI47 508 aa11.53□□□□□ -0.56
TRAV6-201ENST00000390428 ST18O60284 1047 aa11.53□□□□□ -0.56
TRAV6-201ENST00000390428 PPP1R37O75864 691 aa11.53□□□□□ -0.56
TRAV6-201ENST00000390428 ADAMTS2O95450 1211 aa11.53□□□□□ -0.56
TRAV6-201ENST00000390428 NGLY1Q96IV0 654 aa11.53□□□□□ -0.56
TRAV6-201ENST00000390428 CDC42BPGQ6DT37 1551 aa11.53□□□□□ -0.56
TRAV6-201ENST00000390428 COL22A1Q8NFW1 1626 aaPredicted RBP11.53□□□□□ -0.56
TRAV6-201ENST00000390428 ADGRF5Q8IZF2 1346 aa11.52□□□□□ -0.57
TRAV6-201ENST00000390428 CCDC144AA2RUR9 1427 aa11.52□□□□□ -0.57
TRAV6-201ENST00000390428 POTEGQ6S5H5 508 aa11.51□□□□□ -0.57
TRAV6-201ENST00000390428 RTN4Q9NQC3 1192 aaKnown RBP11.51□□□□□ -0.57
TRAV6-201ENST00000390428 KNDC1Q76NI1 1749 aa11.51□□□□□ -0.57
TRAV6-201ENST00000390428 MARF1Q9Y4F3 1742 aaKnown RBP11.51□□□□□ -0.57
TRAV6-201ENST00000390428 SPATA31E1Q6ZUB1 1445 aa11.51□□□□□ -0.57
TRAV6-201ENST00000390428 ESCO1Q5FWF5 840 aa11.5□□□□□ -0.57
TRAV6-201ENST00000390428 ANKRD30BQ9BXX2 1392 aa11.5□□□□□ -0.57
TRAV6-201ENST00000390428 TECPR2O15040 1411 aa11.5□□□□□ -0.57
TRAV6-201ENST00000390428 RGL3Q3MIN7 710 aa11.49□□□□□ -0.57
TRAV6-201ENST00000390428 FNBP4Q8N3X1 1017 aaPredicted RBP11.49□□□□□ -0.57
TRAV6-201ENST00000390428 MPHOSPH9Q99550 1183 aa11.49□□□□□ -0.57
TRAV6-201ENST00000390428 USP21Q9UK80 565 aa11.49□□□□□ -0.57
TRAV6-201ENST00000390428 TRPC5Q9UL62 973 aaPredicted RBP11.49□□□□□ -0.57
TRAV6-201ENST00000390428 NPHP3Q7Z494 1330 aa11.49□□□□□ -0.57
TRAV6-201ENST00000390428 LRPPRCP42704 1394 aaKnown RBP11.49□□□□□ -0.57
TRAV6-201ENST00000390428 MYOM2P54296 1465 aa11.49□□□□□ -0.57
TRAV6-201ENST00000390428 PXDNQ92626 1479 aa11.49□□□□□ -0.57
TRAV6-201ENST00000390428 WAPLQ7Z5K2 1190 aa11.48□□□□□ -0.57
TRAV6-201ENST00000390428 STK26Q9P289 416 aa11.48□□□□□ -0.57
TRAV6-201ENST00000390428 ABCC11Q96J66 1382 aa11.48□□□□□ -0.57
TRAV6-201ENST00000390428 RGPD8O14715 1765 aaPredicted RBP11.47□□□□□ -0.57
TRAV6-201ENST00000390428 FMN2Q9NZ56 1722 aa11.47□□□□□ -0.57
TRAV6-201ENST00000390428 PIK3C2GO75747 1445 aa11.47□□□□□ -0.57
TRAV6-201ENST00000390428 FOXO3O43524 673 aa11.47□□□□□ -0.57
TRAV6-201ENST00000390428 ATRNO75882 1429 aa11.46□□□□□ -0.57
TRAV6-201ENST00000390428 PLEKHH1Q9ULM0 1364 aa11.46□□□□□ -0.57
TRAV6-201ENST00000390428 NUTM2FA1L443 756 aa11.46□□□□□ -0.57
TRAV6-201ENST00000390428 HOXB3P14651 431 aaPredicted RBP11.46□□□□□ -0.57
TRAV6-201ENST00000390428 XPCQ01831 940 aaPredicted RBP11.46□□□□□ -0.57
TRAV6-201ENST00000390428 TMEM132EQ6IEE7 984 aa11.46□□□□□ -0.57
TRAV6-201ENST00000390428 KIF1AQ12756 1690 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms