RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 ANKRD50Q9ULJ7 1429 aa10.71□□□□□ -0.69
TRBV28-201ENST00000390400 ERBINQ96RT1 1412 aa10.7□□□□□ -0.7
TRBV28-201ENST00000390400 DHX29Q7Z478 1369 aaKnown RBP10.7□□□□□ -0.7
TRBV28-201ENST00000390400 CLCN1P35523 988 aa10.7□□□□□ -0.7
TRBV28-201ENST00000390400 METTL3Q86U44 580 aaKnown RBP10.7□□□□□ -0.7
TRBV28-201ENST00000390400 TTC13Q8NBP0 860 aa10.7□□□□□ -0.7
TRBV28-201ENST00000390400 PCMTD1Q96MG8 357 aaPredicted RBP10.7□□□□□ -0.7
TRBV28-201ENST00000390400 ARID3AQ99856 593 aa10.7□□□□□ -0.7
TRBV28-201ENST00000390400 FAM217BQ9NTX9 383 aaPredicted RBP10.7□□□□□ -0.7
TRBV28-201ENST00000390400 ADGRG1Q9Y653 693 aa10.7□□□□□ -0.7
TRBV28-201ENST00000390400 REREQ9P2R6 1566 aa10.69□□□□□ -0.7
TRBV28-201ENST00000390400 POTEJP0CG39 1038 aa10.69□□□□□ -0.7
TRBV28-201ENST00000390400 C6orf132Q5T0Z8 1188 aa10.69□□□□□ -0.7
TRBV28-201ENST00000390400 BEGAINQ9BUH8 593 aa10.69□□□□□ -0.7
TRBV28-201ENST00000390400 FLIIQ13045 1269 aa10.68□□□□□ -0.7
TRBV28-201ENST00000390400 PXYLP1Q8TE99 480 aa10.68□□□□□ -0.7
TRBV28-201ENST00000390400 EIF2AK4Q9P2K8 1649 aaKnown RBP10.68□□□□□ -0.7
TRBV28-201ENST00000390400 RAB3GAP2Q9H2M9 1393 aa10.67□□□□□ -0.7
TRBV28-201ENST00000390400 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.67□□□□□ -0.7
TRBV28-201ENST00000390400 FAM198AQ9UFP1 575 aa10.67□□□□□ -0.7
TRBV28-201ENST00000390400 AGLP35573 1532 aa10.67□□□□□ -0.7
TRBV28-201ENST00000390400 BCORL1Q5H9F3 1711 aa10.67□□□□□ -0.7
TRBV28-201ENST00000390400 KIF3BO15066 747 aa10.66□□□□□ -0.7
TRBV28-201ENST00000390400 SKIV2LQ15477 1246 aaKnown RBP10.66□□□□□ -0.7
TRBV28-201ENST00000390400 ADAM33Q9BZ11 813 aa10.66□□□□□ -0.7
TRBV28-201ENST00000390400 C3orf80F5H4A9 247 aa10.65□□□□□ -0.7
TRBV28-201ENST00000390400 APBB1O00213 710 aa10.65□□□□□ -0.7
TRBV28-201ENST00000390400 MCM6Q14566 821 aa10.65□□□□□ -0.7
TRBV28-201ENST00000390400 POLR3EQ9NVU0 708 aa10.65□□□□□ -0.7
TRBV28-201ENST00000390400 RNF17Q9BXT8 1623 aaKnown RBP10.65□□□□□ -0.7
TRBV28-201ENST00000390400 SIGLEC1Q9BZZ2 1709 aa10.64□□□□□ -0.71
TRBV28-201ENST00000390400 ARID4BQ4LE39 1312 aaPredicted RBP10.64□□□□□ -0.71
TRBV28-201ENST00000390400 NUDT7P0C024 238 aa10.64□□□□□ -0.71
TRBV28-201ENST00000390400 HOXB3P14651 431 aaPredicted RBP10.64□□□□□ -0.71
TRBV28-201ENST00000390400 CCER1Q8TC90 406 aaPredicted RBP10.64□□□□□ -0.71
TRBV28-201ENST00000390400 FBXW7Q969H0 707 aa10.64□□□□□ -0.71
TRBV28-201ENST00000390400 DEPDC5O75140 1603 aa10.63□□□□□ -0.71
TRBV28-201ENST00000390400 ARSIQ5FYB1 569 aa10.63□□□□□ -0.71
TRBV28-201ENST00000390400 ZNF454Q8N9F8 522 aa10.63□□□□□ -0.71
TRBV28-201ENST00000390400 POM121Q96HA1 1249 aa10.63□□□□□ -0.71
TRBV28-201ENST00000390400 UNC13BO14795 1591 aa10.63□□□□□ -0.71
TRBV28-201ENST00000390400 A6NJR5 290 aa10.62□□□□□ -0.71
TRBV28-201ENST00000390400 MYSM1Q5VVJ2 828 aa10.62□□□□□ -0.71
TRBV28-201ENST00000390400 ZDHHC16Q969W1 377 aa10.62□□□□□ -0.71
TRBV28-201ENST00000390400 TRIM52Q96A61 297 aa10.62□□□□□ -0.71
TRBV28-201ENST00000390400 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.62□□□□□ -0.71
TRBV28-201ENST00000390400 PRDM15P57071 1507 aaPredicted RBP10.62□□□□□ -0.71
TRBV28-201ENST00000390400 KANK1Q14678 1352 aa10.62□□□□□ -0.71
TRBV28-201ENST00000390400 TRAK2O60296 914 aa10.61□□□□□ -0.71
TRBV28-201ENST00000390400 GGT6Q6P531 493 aa10.61□□□□□ -0.71
TRBV28-201ENST00000390400 NUP155O75694 1391 aa10.61□□□□□ -0.71
TRBV28-201ENST00000390400 MROH1Q8NDA8 1641 aa10.61□□□□□ -0.71
TRBV28-201ENST00000390400 KDM5DQ9BY66 1539 aa10.6□□□□□ -0.71
TRBV28-201ENST00000390400 POTEB2H3BUK9 544 aa10.6□□□□□ -0.71
TRBV28-201ENST00000390400 OATP04181 439 aa10.6□□□□□ -0.71
TRBV28-201ENST00000390400 IQGAP3Q86VI3 1631 aa10.59□□□□□ -0.71
TRBV28-201ENST00000390400 COL9A1P20849 921 aa10.59□□□□□ -0.71
TRBV28-201ENST00000390400 MLECQ14165 292 aa10.59□□□□□ -0.71
TRBV28-201ENST00000390400 GPR153Q6NV75 609 aa10.59□□□□□ -0.71
TRBV28-201ENST00000390400 VWDEQ8N2E2 1590 aa10.59□□□□□ -0.71
TRBV28-201ENST00000390400 FAM135AQ9P2D6 1515 aa10.58□□□□□ -0.72
TRBV28-201ENST00000390400 ABCC3O15438 1527 aa10.58□□□□□ -0.72
TRBV28-201ENST00000390400 ZC3H13Q5T200 1668 aaKnown RBP10.57□□□□□ -0.72
TRBV28-201ENST00000390400 PZPP20742 1482 aa10.57□□□□□ -0.72
TRBV28-201ENST00000390400 PRSS12P56730 875 aa10.57□□□□□ -0.72
TRBV28-201ENST00000390400 CDCA7LQ96GN5 454 aa10.57□□□□□ -0.72
TRBV28-201ENST00000390400 TBC1D2Q9BYX2 928 aa10.57□□□□□ -0.72
TRBV28-201ENST00000390400 CEP152O94986 1710 aa10.57□□□□□ -0.72
TRBV28-201ENST00000390400 WASHC2CQ9Y4E1 1318 aa10.57□□□□□ -0.72
TRBV28-201ENST00000390400 FNBP4Q8N3X1 1017 aaPredicted RBP10.56□□□□□ -0.72
TRBV28-201ENST00000390400 ESF1Q9H501 851 aaKnown RBP10.56□□□□□ -0.72
TRBV28-201ENST00000390400 LIMD1Q9UGP4 676 aa10.56□□□□□ -0.72
TRBV28-201ENST00000390400 LMTK2Q8IWU2 1503 aa10.56□□□□□ -0.72
TRBV28-201ENST00000390400 TET3O43151 1660 aa10.56□□□□□ -0.72
TRBV28-201ENST00000390400 FER1L4A9Z1Z3 1794 aa10.55□□□□□ -0.72
TRBV28-201ENST00000390400 CLTCQ00610 1675 aaKnown RBP10.55□□□□□ -0.72
TRBV28-201ENST00000390400 POTEHQ6S545 545 aa10.55□□□□□ -0.72
TRBV28-201ENST00000390400 CERKQ8TCT0 537 aa10.55□□□□□ -0.72
TRBV28-201ENST00000390400 MPHOSPH9Q99550 1183 aa10.55□□□□□ -0.72
TRBV28-201ENST00000390400 ANP32EQ9BTT0 268 aa10.55□□□□□ -0.72
TRBV28-201ENST00000390400 SNRKQ9NRH2 765 aa10.55□□□□□ -0.72
TRBV28-201ENST00000390400 RBM27Q9P2N5 1060 aaKnown RBP10.55□□□□□ -0.72
TRBV28-201ENST00000390400 CNTLNQ9NXG0 1405 aa10.55□□□□□ -0.72
TRBV28-201ENST00000390400 CCDC82Q8N4S0 544 aa10.54□□□□□ -0.72
TRBV28-201ENST00000390400 EYA1Q99502 592 aa10.54□□□□□ -0.72
TRBV28-201ENST00000390400 LHX6Q9UPM6 363 aa10.54□□□□□ -0.72
TRBV28-201ENST00000390400 CAMSAP1Q5T5Y3 1602 aa10.54□□□□□ -0.72
TRBV28-201ENST00000390400 ADAMTSL3P82987 1691 aa10.53□□□□□ -0.72
TRBV28-201ENST00000390400 EFCAB6Q5THR3 1501 aa10.53□□□□□ -0.72
TRBV28-201ENST00000390400 DHX57Q6P158 1386 aaKnown RBP10.53□□□□□ -0.72
TRBV28-201ENST00000390400 CLK2P49760 499 aaKnown RBP10.53□□□□□ -0.72
TRBV28-201ENST00000390400 TSKSQ9UJT2 592 aa10.53□□□□□ -0.72
TRBV28-201ENST00000390400 MADDQ8WXG6 1647 aa10.53□□□□□ -0.72
TRBV28-201ENST00000390400 RCCD1A6NED2 376 aa10.52□□□□□ -0.73
TRBV28-201ENST00000390400 SPIRE2Q8WWL2 714 aa10.52□□□□□ -0.73
TRBV28-201ENST00000390400 MROH2AA6NES4 1674 aa10.52□□□□□ -0.73
TRBV28-201ENST00000390400 CFAP65Q6ZU64 1925 aaKnown RBP10.52□□□□□ -0.73
TRBV28-201ENST00000390400 E9PCH4 1651 aa10.51□□□□□ -0.73
TRBV28-201ENST00000390400 RIMS1Q86UR5 1692 aaKnown RBP10.51□□□□□ -0.73
TRBV28-201ENST00000390400 RPRD2Q5VT52 1461 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms