RNA–Protein interactions for RNA: ENST00000389594.7

CCDC196-202, Transcript of coiled-coil domain containing 196, humanhuman

TSL 5

Gene CCDC196, Length 1,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-202ENST00000389594 IER5LQ5T953 404 aa11.97□□□□□ -0.49
CCDC196-202ENST00000389594 MEX3CQ5U5Q3 659 aaKnown RBP11.97□□□□□ -0.49
CCDC196-202ENST00000389594 EFCAB3Q8N7B9 438 aa11.97□□□□□ -0.49
CCDC196-202ENST00000389594 STK24Q9Y6E0 443 aa11.97□□□□□ -0.49
CCDC196-202ENST00000389594 PPLO60437 1756 aa11.97□□□□□ -0.49
CCDC196-202ENST00000389594 C1orf167Q5SNV9 1468 aa11.95□□□□□ -0.5
CCDC196-202ENST00000389594 MARF1Q9Y4F3 1742 aaKnown RBP11.95□□□□□ -0.5
CCDC196-202ENST00000389594 AFF2P51816 1311 aa11.95□□□□□ -0.5
CCDC196-202ENST00000389594 RXRBP28702 533 aa11.95□□□□□ -0.5
CCDC196-202ENST00000389594 GOLGA2Q08379 1002 aa11.95□□□□□ -0.5
CCDC196-202ENST00000389594 TRIM52Q96A61 297 aa11.95□□□□□ -0.5
CCDC196-202ENST00000389594 TAOK2Q9UL54 1235 aa11.94□□□□□ -0.5
CCDC196-202ENST00000389594 CDC42BPGQ6DT37 1551 aa11.93□□□□□ -0.5
CCDC196-202ENST00000389594 POTEJP0CG39 1038 aa11.93□□□□□ -0.5
CCDC196-202ENST00000389594 MKRN3Q13064 507 aaKnown RBP11.93□□□□□ -0.5
CCDC196-202ENST00000389594 LRRC59Q96AG4 307 aaKnown RBP11.93□□□□□ -0.5
CCDC196-202ENST00000389594 NAIPQ13075 1403 aa11.93□□□□□ -0.5
CCDC196-202ENST00000389594 NUTM2BA6NNL0 878 aaPredicted RBP11.92□□□□□ -0.5
CCDC196-202ENST00000389594 NUTM2EB1AL46 878 aaPredicted RBP11.92□□□□□ -0.5
CCDC196-202ENST00000389594 SEC24BO95487 1268 aa11.92□□□□□ -0.5
CCDC196-202ENST00000389594 NUTM2AQ8IVF1 878 aaPredicted RBP11.92□□□□□ -0.5
CCDC196-202ENST00000389594 RRBP1Q9P2E9 1410 aaKnown RBP11.92□□□□□ -0.5
CCDC196-202ENST00000389594 ROBO2Q9HCK4 1378 aa11.92□□□□□ -0.5
CCDC196-202ENST00000389594 IFT172Q9UG01 1749 aa11.91□□□□□ -0.5
CCDC196-202ENST00000389594 SOS2Q07890 1332 aaPredicted RBP11.91□□□□□ -0.5
CCDC196-202ENST00000389594 LHX8Q68G74 356 aa11.91□□□□□ -0.5
CCDC196-202ENST00000389594 PDCD7Q8N8D1 485 aaKnown RBP11.91□□□□□ -0.5
CCDC196-202ENST00000389594 DDX17Q92841 729 aaKnown RBP11.91□□□□□ -0.5
CCDC196-202ENST00000389594 HS6ST3Q8IZP7 471 aa11.9□□□□□ -0.5
CCDC196-202ENST00000389594 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.9□□□□□ -0.5
CCDC196-202ENST00000389594 MYOM2P54296 1465 aa11.89□□□□□ -0.51
CCDC196-202ENST00000389594 KNDC1Q76NI1 1749 aa11.89□□□□□ -0.51
CCDC196-202ENST00000389594 RBM6P78332 1123 aaKnown RBP11.89□□□□□ -0.51
CCDC196-202ENST00000389594 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.89□□□□□ -0.51
CCDC196-202ENST00000389594 PXDNQ92626 1479 aa11.89□□□□□ -0.51
CCDC196-202ENST00000389594 HFM1A2PYH4 1435 aa11.88□□□□□ -0.51
CCDC196-202ENST00000389594 ZNF326Q5BKZ1 582 aaKnown RBP11.88□□□□□ -0.51
CCDC196-202ENST00000389594 C8orf37Q96NL8 207 aa11.88□□□□□ -0.51
CCDC196-202ENST00000389594 OCEL1Q9H607 264 aa11.88□□□□□ -0.51
CCDC196-202ENST00000389594 ATRNO75882 1429 aa11.87□□□□□ -0.51
CCDC196-202ENST00000389594 PLCG2P16885 1265 aa11.87□□□□□ -0.51
CCDC196-202ENST00000389594 ITGAEP38570 1179 aa11.87□□□□□ -0.51
CCDC196-202ENST00000389594 DPY19L2Q6NUT2 758 aa11.87□□□□□ -0.51
CCDC196-202ENST00000389594 PHF8Q9UPP1 1060 aa11.87□□□□□ -0.51
CCDC196-202ENST00000389594 QTRT2Q9H974 415 aaKnown RBP11.86□□□□□ -0.51
CCDC196-202ENST00000389594 FMN2Q9NZ56 1722 aa11.86□□□□□ -0.51
CCDC196-202ENST00000389594 TECPR2O15040 1411 aa11.86□□□□□ -0.51
CCDC196-202ENST00000389594 FNBP4Q8N3X1 1017 aaPredicted RBP11.85□□□□□ -0.51
CCDC196-202ENST00000389594 ORAI2Q96SN7 254 aa11.85□□□□□ -0.51
CCDC196-202ENST00000389594 BCL9LQ86UU0 1499 aa11.84□□□□□ -0.51
CCDC196-202ENST00000389594 ATAD2Q6PL18 1390 aa11.84□□□□□ -0.51
CCDC196-202ENST00000389594 MS4A4AQ96JQ5 239 aa11.84□□□□□ -0.51
CCDC196-202ENST00000389594 MFRPQ9BY79 579 aa11.84□□□□□ -0.51
CCDC196-202ENST00000389594 KIF1AQ12756 1690 aa11.84□□□□□ -0.51
CCDC196-202ENST00000389594 RPGRIP1LQ68CZ1 1315 aa11.84□□□□□ -0.51
CCDC196-202ENST00000389594 NKX1-1Q15270 411 aaPredicted RBP11.83□□□□□ -0.52
CCDC196-202ENST00000389594 ABCA3Q99758 1704 aa11.83□□□□□ -0.52
CCDC196-202ENST00000389594 ADAMTS2O95450 1211 aa11.82□□□□□ -0.52
CCDC196-202ENST00000389594 GLI3P10071 1580 aa11.82□□□□□ -0.52
CCDC196-202ENST00000389594 USP32Q8NFA0 1604 aa11.82□□□□□ -0.52
CCDC196-202ENST00000389594 SPATA31E1Q6ZUB1 1445 aa11.81□□□□□ -0.52
CCDC196-202ENST00000389594 SOX12O15370 315 aa11.81□□□□□ -0.52
CCDC196-202ENST00000389594 FBXO22Q8NEZ5 403 aa11.81□□□□□ -0.52
CCDC196-202ENST00000389594 NGLY1Q96IV0 654 aa11.81□□□□□ -0.52
CCDC196-202ENST00000389594 USP21Q9UK80 565 aa11.81□□□□□ -0.52
CCDC196-202ENST00000389594 TRPC5Q9UL62 973 aaPredicted RBP11.81□□□□□ -0.52
CCDC196-202ENST00000389594 EP400Q96L91 3159 aa11.81□□□□□ -0.52
CCDC196-202ENST00000389594 NPHP3Q7Z494 1330 aa11.8□□□□□ -0.52
CCDC196-202ENST00000389594 SLIT2O94813 1529 aa11.8□□□□□ -0.52
CCDC196-202ENST00000389594 BRWD3Q6RI45 1802 aa11.79□□□□□ -0.52
CCDC196-202ENST00000389594 PIK3C2GO75747 1445 aa11.79□□□□□ -0.52
CCDC196-202ENST00000389594 OTUD5Q96G74 571 aa11.79□□□□□ -0.52
CCDC196-202ENST00000389594 RGPD8O14715 1765 aaPredicted RBP11.79□□□□□ -0.52
CCDC196-202ENST00000389594 PLCH1Q4KWH8 1693 aa11.78□□□□□ -0.52
CCDC196-202ENST00000389594 NWD2Q9ULI1 1742 aa11.78□□□□□ -0.52
CCDC196-202ENST00000389594 PPARGC1BQ86YN6 1023 aaKnown RBP11.78□□□□□ -0.52
CCDC196-202ENST00000389594 LRPPRCP42704 1394 aaKnown RBP11.78□□□□□ -0.52
CCDC196-202ENST00000389594 ADGRF5Q8IZF2 1346 aa11.77□□□□□ -0.53
CCDC196-202ENST00000389594 ABCC11Q96J66 1382 aa11.77□□□□□ -0.53
CCDC196-202ENST00000389594 PLEKHH1Q9ULM0 1364 aa11.76□□□□□ -0.53
CCDC196-202ENST00000389594 RALGAPBQ86X10 1494 aa11.76□□□□□ -0.53
CCDC196-202ENST00000389594 NRXN1Q9ULB1 1477 aa11.76□□□□□ -0.53
CCDC196-202ENST00000389594 NRAPQ86VF7 1730 aa11.75□□□□□ -0.53
CCDC196-202ENST00000389594 NLRP6P59044 892 aa11.75□□□□□ -0.53
CCDC196-202ENST00000389594 ANKRD30BQ9BXX2 1392 aa11.75□□□□□ -0.53
CCDC196-202ENST00000389594 CCDC144AA2RUR9 1427 aa11.75□□□□□ -0.53
CCDC196-202ENST00000389594 ADGRB2O60241 1585 aa11.75□□□□□ -0.53
CCDC196-202ENST00000389594 FOXO3O43524 673 aa11.74□□□□□ -0.53
CCDC196-202ENST00000389594 ESCO1Q5FWF5 840 aa11.74□□□□□ -0.53
CCDC196-202ENST00000389594 LRP5O75197 1615 aa11.74□□□□□ -0.53
CCDC196-202ENST00000389594 TRPM3Q9HCF6 1732 aaPredicted RBP11.74□□□□□ -0.53
CCDC196-202ENST00000389594 SPATA31A3Q5VYP0 1347 aa11.73□□□□□ -0.53
CCDC196-202ENST00000389594 CCDC125Q86Z20 511 aa11.73□□□□□ -0.53
CCDC196-202ENST00000389594 GJD4Q96KN9 370 aaPredicted RBP11.73□□□□□ -0.53
CCDC196-202ENST00000389594 YTHDC2Q9H6S0 1430 aaKnown RBP11.73□□□□□ -0.53
CCDC196-202ENST00000389594 CRYBG1Q9Y4K1 1723 aa11.73□□□□□ -0.53
CCDC196-202ENST00000389594 BLMP54132 1417 aaPredicted RBP11.72□□□□□ -0.53
CCDC196-202ENST00000389594 XPCQ01831 940 aaPredicted RBP11.72□□□□□ -0.53
CCDC196-202ENST00000389594 ALS2Q96Q42 1657 aa11.71□□□□□ -0.53
CCDC196-202ENST00000389594 TNS3Q68CZ2 1445 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms