RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 FGD6Q6ZV73 1430 aa17.93■□□□□ 0.46
LRRK1-201ENST00000388948 EXOC6Q8TAG9 804 aa17.93■□□□□ 0.46
LRRK1-201ENST00000388948 STK11IPQ8N1F8 1099 aa17.92■□□□□ 0.46
LRRK1-201ENST00000388948 NAP1L1P55209 391 aaKnown RBP17.92■□□□□ 0.46
LRRK1-201ENST00000388948 CCDC57Q2TAC2 916 aa17.91■□□□□ 0.46
LRRK1-201ENST00000388948 CDK5RAP3Q96JB5 506 aa17.91■□□□□ 0.46
LRRK1-201ENST00000388948 RTEL1-TNFRSF6BF6WH68 1400 aa17.9■□□□□ 0.46
LRRK1-201ENST00000388948 OFD1O75665 1012 aa17.9■□□□□ 0.46
LRRK1-201ENST00000388948 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.9■□□□□ 0.46
LRRK1-201ENST00000388948 ATP2B1P20020 1258 aa17.9■□□□□ 0.46
LRRK1-201ENST00000388948 KAT6BQ8WYB5 2073 aa17.89■□□□□ 0.45
LRRK1-201ENST00000388948 WDHD1O75717 1129 aaPredicted RBP17.89■□□□□ 0.45
LRRK1-201ENST00000388948 ZPR1O75312 459 aa17.88■□□□□ 0.45
LRRK1-201ENST00000388948 DEKP35659 375 aaKnown RBP17.88■□□□□ 0.45
LRRK1-201ENST00000388948 NESP48681 1621 aa17.88■□□□□ 0.45
LRRK1-201ENST00000388948 PSMA5P28066 241 aa17.88■□□□□ 0.45
LRRK1-201ENST00000388948 PNISRQ8TF01 805 aaKnown RBP17.88■□□□□ 0.45
LRRK1-201ENST00000388948 SIL1Q9H173 461 aa17.88■□□□□ 0.45
LRRK1-201ENST00000388948 IFT140Q96RY7 1462 aa17.88■□□□□ 0.45
LRRK1-201ENST00000388948 CCDC73Q6ZRK6 1079 aa17.88■□□□□ 0.45
LRRK1-201ENST00000388948 IPO9Q96P70 1041 aaKnown RBP17.87■□□□□ 0.45
LRRK1-201ENST00000388948 TMOD2Q9NZR1 351 aa17.87■□□□□ 0.45
LRRK1-201ENST00000388948 KRT18P05783 430 aaKnown RBP17.87■□□□□ 0.45
LRRK1-201ENST00000388948 MPHOSPH10O00566 681 aaKnown RBP17.87■□□□□ 0.45
LRRK1-201ENST00000388948 STARD3NLO95772 234 aa17.86■□□□□ 0.45
LRRK1-201ENST00000388948 ERC1Q8IUD2 1116 aa17.86■□□□□ 0.45
LRRK1-201ENST00000388948 IBSPP21815 317 aaPredicted RBP17.86■□□□□ 0.45
LRRK1-201ENST00000388948 BTBD11A6QL63 1104 aa17.86■□□□□ 0.45
LRRK1-201ENST00000388948 NACAP1Q9BZK3 213 aa17.86■□□□□ 0.45
LRRK1-201ENST00000388948 TWISTNBQ3B726 338 aaPredicted RBP17.85■□□□□ 0.45
LRRK1-201ENST00000388948 SLC12A5Q9H2X9 1139 aa17.85■□□□□ 0.45
LRRK1-201ENST00000388948 CNTLNQ9NXG0 1405 aa17.85■□□□□ 0.45
LRRK1-201ENST00000388948 PLEKHH2Q8IVE3 1493 aa17.85■□□□□ 0.45
LRRK1-201ENST00000388948 SASS6Q6UVJ0 657 aa17.85■□□□□ 0.45
LRRK1-201ENST00000388948 SLC4A2P04920 1241 aa17.85■□□□□ 0.45
LRRK1-201ENST00000388948 NCOA2Q15596 1464 aa17.85■□□□□ 0.45
LRRK1-201ENST00000388948 TCP11L2Q8N4U5 519 aa17.84■□□□□ 0.45
LRRK1-201ENST00000388948 DMRT2Q9Y5R5 561 aa17.84■□□□□ 0.45
LRRK1-201ENST00000388948 ZBED9Q6R2W3 1325 aa17.84■□□□□ 0.45
LRRK1-201ENST00000388948 TTLL12Q14166 644 aaPredicted RBP17.84■□□□□ 0.45
LRRK1-201ENST00000388948 PANK1Q8TE04 598 aa17.84■□□□□ 0.45
LRRK1-201ENST00000388948 ZNF652Q9Y2D9 606 aa17.84■□□□□ 0.45
LRRK1-201ENST00000388948 NCAPD3P42695 1498 aa17.83■□□□□ 0.44
LRRK1-201ENST00000388948 GNAI2P04899 355 aa17.83■□□□□ 0.44
LRRK1-201ENST00000388948 ZNF592Q92610 1267 aa17.83■□□□□ 0.44
LRRK1-201ENST00000388948 CC2D2AQ9P2K1 1620 aa17.83■□□□□ 0.44
LRRK1-201ENST00000388948 SNAPC4Q5SXM2 1469 aa17.83■□□□□ 0.44
LRRK1-201ENST00000388948 IGHMBP2P38935 993 aaKnown RBP17.83■□□□□ 0.44
LRRK1-201ENST00000388948 RRS1Q15050 365 aaKnown RBP17.82■□□□□ 0.44
LRRK1-201ENST00000388948 HIP1O00291 1037 aa17.82■□□□□ 0.44
LRRK1-201ENST00000388948 PTCD1O75127 700 aaKnown RBP17.82■□□□□ 0.44
LRRK1-201ENST00000388948 TMOD3Q9NYL9 352 aa17.82■□□□□ 0.44
LRRK1-201ENST00000388948 TXLNAP40222 546 aa17.82■□□□□ 0.44
LRRK1-201ENST00000388948 FKBP4Q02790 459 aaKnown RBP eCLIP17.82■□□□□ 0.44
LRRK1-201ENST00000388948 SKOR2Q2VWA4 1001 aaPredicted RBP17.82■□□□□ 0.44
LRRK1-201ENST00000388948 CCDC85AQ96PX6 553 aaPredicted RBP17.82■□□□□ 0.44
LRRK1-201ENST00000388948 HOMER1Q86YM7 354 aa17.81■□□□□ 0.44
LRRK1-201ENST00000388948 OLFM4Q6UX06 510 aa17.81■□□□□ 0.44
LRRK1-201ENST00000388948 HSP90AB2PQ58FF8 381 aa17.81■□□□□ 0.44
LRRK1-201ENST00000388948 KCNH5Q8NCM2 988 aa17.81■□□□□ 0.44
LRRK1-201ENST00000388948 C9orf84Q5VXU9 1444 aa17.81■□□□□ 0.44
LRRK1-201ENST00000388948 PDE4AP27815 886 aa17.81■□□□□ 0.44
LRRK1-201ENST00000388948 RAI14Q9P0K7 980 aa17.8■□□□□ 0.44
LRRK1-201ENST00000388948 SPINK5Q9NQ38 1064 aaPredicted RBP17.8■□□□□ 0.44
LRRK1-201ENST00000388948 KIF7Q2M1P5 1343 aa17.79■□□□□ 0.44
LRRK1-201ENST00000388948 SDF4Q9BRK5 362 aa17.79■□□□□ 0.44
LRRK1-201ENST00000388948 ADAMTS8Q9UP79 889 aa17.79■□□□□ 0.44
LRRK1-201ENST00000388948 ZHX3Q9H4I2 956 aa17.79■□□□□ 0.44
LRRK1-201ENST00000388948 LRP2BPQ9P2M1 347 aa17.79■□□□□ 0.44
LRRK1-201ENST00000388948 SOGA3Q5TF21 947 aa17.78■□□□□ 0.44
LRRK1-201ENST00000388948 ZNF219Q9P2Y4 722 aaPredicted RBP17.78■□□□□ 0.44
LRRK1-201ENST00000388948 ERBINQ96RT1 1412 aa17.78■□□□□ 0.44
LRRK1-201ENST00000388948 MYCNP04198 464 aaPredicted RBP17.78■□□□□ 0.44
LRRK1-201ENST00000388948 CASKIN1Q8WXD9 1431 aa17.78■□□□□ 0.44
LRRK1-201ENST00000388948 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.78■□□□□ 0.44
LRRK1-201ENST00000388948 SYCP1Q15431 976 aa17.78■□□□□ 0.44
LRRK1-201ENST00000388948 MPRIPQ6WCQ1 1025 aa17.78■□□□□ 0.44
LRRK1-201ENST00000388948 CHMP4BP1P59074 171 aa17.78■□□□□ 0.44
LRRK1-201ENST00000388948 EXOSC9Q06265 439 aaKnown RBP17.78■□□□□ 0.44
LRRK1-201ENST00000388948 SRCIN1Q9C0H9 1055 aa17.78■□□□□ 0.44
LRRK1-201ENST00000388948 ZSCAN25Q6NSZ9 544 aa17.77■□□□□ 0.44
LRRK1-201ENST00000388948 LRRC9Q6ZRR7 1453 aa17.77■□□□□ 0.44
LRRK1-201ENST00000388948 CDC45O75419 566 aa17.77■□□□□ 0.44
LRRK1-201ENST00000388948 C1orf115Q9H7X2 142 aa17.77■□□□□ 0.44
LRRK1-201ENST00000388948 ANKIB1Q9P2G1 1089 aa17.77■□□□□ 0.44
LRRK1-201ENST00000388948 NUP133Q8WUM0 1156 aa17.77■□□□□ 0.43
LRRK1-201ENST00000388948 CEP126Q9P2H0 1117 aa17.77■□□□□ 0.43
LRRK1-201ENST00000388948 CCDC69A6NI79 296 aa17.76■□□□□ 0.43
LRRK1-201ENST00000388948 TDO2P48775 406 aa17.76■□□□□ 0.43
LRRK1-201ENST00000388948 NBPF1Q3BBV0 1214 aa17.76■□□□□ 0.43
LRRK1-201ENST00000388948 NUDT16Q96DE0 195 aaKnown RBP17.76■□□□□ 0.43
LRRK1-201ENST00000388948 TNNT3P45378 269 aaPredicted RBP17.76■□□□□ 0.43
LRRK1-201ENST00000388948 ABCF2Q9UG63 623 aa17.76■□□□□ 0.43
LRRK1-201ENST00000388948 FOXO3O43524 673 aa17.75■□□□□ 0.43
LRRK1-201ENST00000388948 PATL2C9JE40 543 aaKnown RBP17.75■□□□□ 0.43
LRRK1-201ENST00000388948 BCL11BQ9C0K0 894 aaPredicted RBP17.75■□□□□ 0.43
LRRK1-201ENST00000388948 CCDC7Q96M83 1385 aa17.75■□□□□ 0.43
LRRK1-201ENST00000388948 RDXP35241 583 aaKnown RBP17.75■□□□□ 0.43
LRRK1-201ENST00000388948 GPS2Q13227 327 aa17.75■□□□□ 0.43
LRRK1-201ENST00000388948 CCT4P50991 539 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms